prot_H-paniculata_contig183.4480.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig183.4480.1
Unique Nameprot_H-paniculata_contig183.4480.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length486
Homology
BLAST of mRNA_H-paniculata_contig183.4480.1 vs. uniprot
Match: D7FIZ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ6_ECTSI)

HSP 1 Score: 375 bits (962), Expect = 1.220e-122
Identity = 230/453 (50.77%), Postives = 285/453 (62.91%), Query Frame = 0
Query:   21 NPWLSQNWGLLVMAGAAVGTIIVSAGTQVESS--ARPNHFPPVAHQTLFSV--NSGVSAVAMPPSAASYRNQGRSRVAAALGALGRHRTLQENGEVLDKPVVEYETQLELFMCNPTLVTEGNDAYIVGTAELANALSRVHGLKQVDASEITVSISTAPSDDTEAFYKCEDIGMLQWHASIKYPAATAESLDTTCALMAAQANDYVAYSKDEFKELLTGYINDEYATSTDSENVELVPSDIVAPVVGWIVTF-SEEGTTTQTASDVNSNGIAAGIEGDYVMWSWWVWLLYLXXXTCXLFPXXXXXXXXXXXXXXXXXXXXXXPDTTREGRKEEGLKKIRGPEWGITELDFEEDYKNYQSPEMKQEYVGANKGIQSTGYRAS-RPGHQSISDTAWMQQAGKKSEWAQPSPSSPSSGSGTSPTRVRRFDIDED-ADGSVGRLREKHPKYSFDMNAG 466
            NPW+++NWGL++ A A V T+  S GT   +S          V  Q+L++   + G  +VA     +S R  GR               LQE    +  P+VEY T+L++FMCNP+L  EGNDA++V  A LA ALS + G+KQ D  +ITV+I T P D  +  Y C+  GMLQWHA ++Y AA A S DTT A++AAQANDYVAYS  +FK LL G+IN EYA     E VEL   DI+ P VGWIVTF +EE  T +T +  +S+G+A GI  D  +W+WWVWL+Y     CX   XXXXXXXXX                TR+GR EEGL KIRGPEWGITELDFE DY  YQS EMK+EY GA +G++ T YR S R G QS+S  AWMQ+AGKKS WAQPS +S   G G SP  VRRFDID+D AD  VG+LR KHP+YSFD+  G
Sbjct:   12 NPWVARNWGLVIAAAATVATVAFSLGTTASTSRSGAMTGSARVGQQSLYASPKSRGGISVAQAQRPSSVRPHGR--------------VLQEETPTVITPIVEYGTKLQIFMCNPSLEVEGNDAHLVDEASLAAALSNISGIKQADEGDITVTIKTEPVDVDDVSYMCDTDGMLQWHAQVEYSAAYAGSRDTTPAVLAAQANDYVAYSSSQFKALLAGFINAEYAGEV--ETVELSADDILIPTVGWIVTFPAEESVTQETHTAGSSDGLAMGIGSDSSLWAWWVWLIYALLVACXXXXXXXXXXXXXADEKEAARDRLI---ATRKGRGEEGLAKIRGPEWGITELDFEGDYDAYQSQEMKREYDGAGRGVEPTAYRPSHRAGQQSVSAQAWMQEAGKKSAWAQPSGNSSRQGGGQSPV-VRRFDIDDDDADDGVGKLRSKHPQYSFDVGRG 444          
BLAST of mRNA_H-paniculata_contig183.4480.1 vs. uniprot
Match: A0A835YQ53_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ53_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 8.740e-15
Identity = 90/345 (26.09%), Postives = 137/345 (39.71%), Query Frame = 0
Query:  118 VEYETQLELFMCNPTLVTEGNDAYIVGTAELANALSRVHGLKQVDASEITVSISTAPSDDTEAFYKCEDIGMLQWHASIKY----------PAATAESLDTTCAL-----------MAAQANDYVAYS--KDEFKELLTGYINDEYATSTDSENVE---LVPSDIVAPVVGWIVTFSEEGTTTQTASDVNSNG--IAAGIEGDYVMWSWWVWLLYLXXXTCXLFPXXXXXXXXXXXXXXXXXXXXXXPDTTREG------RKEEGLKKIRGPEWGITELDFEEDYKNYQSPEMKQEYVGANKGIQSTGYRASRPGHQ----------SISDTAWMQQAGKKSEWA 418
            + YE Q  +F+C        ++   V  + + +A+  +    +     ++V  +T       A YKC   G  QW  S+ Y           A    + +TT +             A++AND+V YS   +   +  T +    YA    +  +    +  SD+     GWI  FS    +    S   S    ++ GI G+ V W  W W+L+         P                       +   EG      RKEEGL+KI G E+GIT LDF+ +Y +Y+ P+M+ EY GA     S   RAS  GH+           +S TAW  + GKKS +A
Sbjct:  115 ISYEAQFNMFICPTQAGVANSNVKAVTESHVRDAVLSLDAFGKPSLDAVSVGFTTY-----RAPYKCAIAGSTQWSVSVVYRDPSYYRRHLTAVATTATNTTLSAGYVDPSSNAVTRASEANDWVTYSFPNNSTADFRTAF----YAAVAAAAGLPAGAITYSDLQVQSSGWIARFSSSEGSVPPGSLAFSTPTMMSVGIAGNEV-WPAWAWVLFALAVLACALPLCMFILKKRAAEF----------EEEEEGYGLLKLRKEEGLEKIHGNEFGITNLDFDGNYNDYEEPKMQDEYAGATAAAAS---RASH-GHKRMDSAGTSTVDVSATAWSNEKGKKSNFA 435          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig183.4480.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FIZ6_ECTSI1.220e-12250.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YQ53_9STRA8.740e-1526.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..297
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 321..485
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 298..320
NoneNo IPR availableTMHMMTMhelixcoord: 298..320

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig183contigH-paniculata_contig183:39266..43455 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig183.4480.1mRNA_H-paniculata_contig183.4480.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig183 38241..43989 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig183.4480.1 ID=prot_H-paniculata_contig183.4480.1|Name=mRNA_H-paniculata_contig183.4480.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=486bp
MFAQHEPDRLKPEPHDQQRGNPWLSQNWGLLVMAGAAVGTIIVSAGTQVE
SSARPNHFPPVAHQTLFSVNSGVSAVAMPPSAASYRNQGRSRVAAALGAL
GRHRTLQENGEVLDKPVVEYETQLELFMCNPTLVTEGNDAYIVGTAELAN
ALSRVHGLKQVDASEITVSISTAPSDDTEAFYKCEDIGMLQWHASIKYPA
ATAESLDTTCALMAAQANDYVAYSKDEFKELLTGYINDEYATSTDSENVE
LVPSDIVAPVVGWIVTFSEEGTTTQTASDVNSNGIAAGIEGDYVMWSWWV
WLLYLLLVTCCLFPLCCVIFERRNDEDKIAPQQQQQPDTTREGRKEEGLK
KIRGPEWGITELDFEEDYKNYQSPEMKQEYVGANKGIQSTGYRASRPGHQ
SISDTAWMQQAGKKSEWAQPSPSSPSSGSGTSPTRVRRFDIDEDADGSVG
RLREKHPKYSFDMNAGRRAGAGGARVGASTNETKL*
back to top