prot_H-paniculata_contig183.4477.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig183.4477.1
Unique Nameprot_H-paniculata_contig183.4477.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length277
Homology
BLAST of mRNA_H-paniculata_contig183.4477.1 vs. uniprot
Match: D7FIZ3_ECTSI (Altered inheritance of mitochondria protein 24, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ3_ECTSI)

HSP 1 Score: 278 bits (711), Expect = 1.840e-90
Identity = 144/250 (57.60%), Postives = 183/250 (73.20%), Query Frame = 0
Query:   23 PRFMSLGEGSEILQVALAPGDSIVAGERSFCYRGLGLKAAEVQNPNERGAIGRALGWT-MKQDKVVKWTNEGTAPTYLGLSSPLPGKVIPVDLRQAGAILTKPQMFLCSVTDNQVTTQNLKLTPEGPFPVYHVDLRKVVGSGMCYIQAGGAAVQKTLGRGEAMMVEMGCVVAFAEKCKIVAEQRTG-FIREPPYSQGFNVKITGPGTVFLQSSHVGRLCQSMAVER-ALVRPAMGDAWKGATLLVVIVAV 269
            PRF+SLGEGSE+LQVAL PGD+I+A E++F YRGLGL+    Q     G +GRALGW  +K D+VVK+TNEG +PTYLGL++ LPGKVIPV L ++G +L KP +FLCSV +N ++T  +KL  EG      V++RK+ G+GMCYI  GGAAVQK LGRGE+M+VE GCV A ++ CKIV E+R G  IREPPY QGF VKITGPG+VF+QS+H GRL ++   +R A      GD  K A L +VI+ V
Sbjct:   18 PRFLSLGEGSEVLQVALCPGDAILANEKAFVYRGLGLQ----QELQPTGPMGRALGWIGVKNDRVVKFTNEGNSPTYLGLTASLPGKVIPVSLAKSGTLLAKPSVFLCSVVENDISTAKIKLQSEGQSSQQSVEMRKIAGAGMCYIHGGGAAVQKALGRGESMVVEFGCVAAVSDACKIVPEERNGPLIREPPYFQGFQVKITGPGSVFIQSTHTGRLSRASRADRVAQGGSGGGDMMKAAVLTLVIMIV 263          
BLAST of mRNA_H-paniculata_contig183.4477.1 vs. uniprot
Match: A0A7Y5PVV1_9PLAN (TIGR00266 family protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7Y5PVV1_9PLAN)

HSP 1 Score: 96.3 bits (238), Expect = 4.300e-20
Identity = 63/211 (29.86%), Postives = 106/211 (50.24%), Query Frame = 0
Query:   29 GEGSEILQVALAPGDSIVAGERSFCYRGLGLKAAEVQNPNERGAIGRALGWTMKQDKVVKWTNEGTAPTYLGLSSPLPGKVIPVDLRQAGAILTKPQMFLCSVTDNQVTTQNLKLTPEGPFPVYHVDLRKVVGSGMCYIQAGGAAVQKTLGRGEAMMVEMGCVVAFAEKCKIVAEQRTGFIREPPYSQG-FNVKITGPGTVFLQSSHVGRL 238
            G+  + +QV LAP D++ A   +F +   G++            + R +G   +   V  +TN+G AP  +  ++P PGKV+P+DL + G +L +   +LCS TD Q++    +    G F      L+++ G G  ++ A G+ V++TLG+GE + V+ GC+VA         +   G        +G F   + GPG V+LQ+    RL
Sbjct:   11 GDDFQYVQVRLAPRDAVRAEPGAFVWMENGIEMETSTGGGVLSGLKRMIGG--ESFFVTTFTNQGGAPATVAFAAPYPGKVLPIDLSR-GTVLCQRDAYLCSTTDAQISVAFTRRFGAGLFGGEGFMLQRIEGRGTAFLHASGSVVERTLGQGETLRVDTGCIVAMEAGVDYDIQMVRGVKSFLFGGEGLFFAVLRGPGRVWLQTLPFSRL 218          
BLAST of mRNA_H-paniculata_contig183.4477.1 vs. uniprot
Match: A0A2K1NT36_9BACT (Uncharacterized protein n=1 Tax=Petrotoga sp. 9PWA.NaAc.5.4 TaxID=1434328 RepID=A0A2K1NT36_9BACT)

HSP 1 Score: 96.3 bits (238), Expect = 5.230e-20
Identity = 62/218 (28.44%), Postives = 105/218 (48.17%), Query Frame = 0
Query:   25 FMSLGEGSEILQVALAPGDSIVAGERSFCYRGLGLKAAEVQNPNERGAIGRALGWTMKQDK--VVKWTNEGTAPTYLGLSSPLPGKVIPVDLRQA-GAILTKPQMFLCSVTDNQVTTQNLKLTPEGPFPVYHVDLRKVVGSGMCYIQAGGAAVQKTLGRGEAMMVEMGCVVAFAEKCKIVAEQRTGFIREPPYSQG-FNVKITGPGTVFLQSSHVGRL 238
            +   G+  +++++ L PG+ I A   +  Y   G+        N  G + R L      +   +  +  EG+   ++   +P PGK++P+DL Q  G+ + +   FLC+    ++  +  K    G F      L+++ G GM +I AGG  ++K L  GE + V+ GC+V F +  K   +   GF       +G F  K+TGPGT++LQS    RL
Sbjct:    7 YKIFGDDMQLVEIELDPGEGIRAEVGAMMYMEDGI----AMQTNTGGGLFRGLKRAFAGESFFITNFVQEGSGKGHVAFGAPYPGKILPIDLIQFNGSFICQKDSFLCAANGIEIEIEFTKRIGTGLFGGEGFILQRLEGHGMAFIHAGGTVIEKHLEPGETLRVDTGCIVGFQKTVKYDIQFVGGFKNALFGGEGMFLAKLTGPGTIYLQSLPFSRL 220          
BLAST of mRNA_H-paniculata_contig183.4477.1 vs. uniprot
Match: A0A4U7JC59_9FIRM (TIGR00266 family protein n=1 Tax=Ruminiclostridium herbifermentans TaxID=2488810 RepID=A0A4U7JC59_9FIRM)

HSP 1 Score: 95.9 bits (237), Expect = 7.560e-20
Identity = 66/221 (29.86%), Postives = 108/221 (48.87%), Query Frame = 0
Query:   25 FMSLGEGSEILQVALAPGDSIVAGERSFCYRGLGLKAAEVQNPNERGAI-GRALGWTMKQDKVVKWTNEGTAPTYLGLSSPLPGKVIPVDLRQAG-AILTKPQMFLCSVTDNQVTTQNLKLTPEGPFPVYHVDLRKVVGSGMCYIQAGGAAVQKTLGRGEAMMVEMGCVVAFAEKCKIVAEQRTGFIREPPYSQG-FNVKITGPGTVFLQSSHVGRLCQSM 242
            +  +G+  +I+++ L P + + A   +  Y    +    +Q   + GA+ G     T +   +  + N GT   ++  S+P PGK+IP+DL   G + L +   FLC     +V     +    G F      L+K+VG GM +I AGG  ++K L  G+ + V+ GC+VAF+       +   GF       +G F  K+TGPGTV+LQS  + RL   +
Sbjct:    7 YKIIGDDMQIVEIELDPSEGVRAEAGAMMYTDQNIV---MQTSTQGGALKGFKRMLTGESFFITTFYNTGTQKEHVAFSAPYPGKIIPIDLASVGGSFLCQKDAFLCCANGVEVEVAFTRKLGAGFFGGEGFILQKLVGDGMAFIHAGGTIIRKDLMPGQTLKVDTGCLVAFSPTVDYDIQFVGGFKNALFGGEGVFLAKMTGPGTVYLQSLPLARLADRL 224          
BLAST of mRNA_H-paniculata_contig183.4477.1 vs. uniprot
Match: A0A6P5FUF8_ANACO (Altered inheritance of mitochondria protein 24, mitochondrial n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5FUF8_ANACO)

HSP 1 Score: 95.9 bits (237), Expect = 1.190e-19
Identity = 70/237 (29.54%), Postives = 111/237 (46.84%), Query Frame = 0
Query:   25 FMSLGEGSEILQVALAPGDSIVAGERSFCYRGLGLKAAEVQNPNERGAIGRALGWTMKQDKVVKWTNEGTAPTYLGLSSPLPGKVIPVDLRQAGA-ILTKPQMFLCSVTDNQVTT---QNLKLTPEGPFPVYHVDLRKVVGSGMCYIQAGGAAVQKTLGRGEAMMVEMGCVVAFAEKCKIVAEQRTGFIREPPYS--QGFNVKITGPGTVFLQSSHVGRLCQSMAVERALVRPAMGD 255
            F  LG  S+I+Q+ L   + + A   + CY    ++      P   G + + L    K    + + N G    Y+G+++P P +++P+DL   G  IL +P  FLCSV D  VT    Q  +    G   +    LR   G G+ ++  GG+ VQK LG GE ++V++  +VA         +     +R   +         +TGPG VF+QS    RL Q +A  RA+  P++ D
Sbjct:   25 FQILGGDSQIVQIMLKSQEKVTAKPGTLCYMSGSIQMDNNYLPENEGGVWQWLFG--KSLTSIVFFNPGPEDGYVGIAAPSPARILPIDLANLGGEILCQPDAFLCSVNDVAVTNTVDQRARNIEVGAEVILKQKLR---GQGLAFLVGGGSVVQKILGVGEVVVVDVASIVAMTTAINFHLKNSNA-VRRAVFGGDNQLTATLTGPGVVFIQSLPFQRLSQRIA--RAVAAPSLRD 253          
BLAST of mRNA_H-paniculata_contig183.4477.1 vs. uniprot
Match: A0A521RJ11_9GAMM (TIGR00266 family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A521RJ11_9GAMM)

HSP 1 Score: 94.7 bits (234), Expect = 1.990e-19
Identity = 66/213 (30.99%), Postives = 103/213 (48.36%), Query Frame = 0
Query:   29 GEGSEILQVALAPGDSIVAGERSFCYRGLGLKAAEVQNPNERGAI-GRALGWTMKQDKVVKWTNEGTAPTYLGLSSPLPGKVIPVDLRQ-AGAILTKPQMFLCSVTDNQVTTQNLKLTPEGPFPVYHVDLRKVVGSGMCYIQAGGAAVQKTLGRGEAMMVEMGCVVAFAEKCKIVAEQRTGFIREPPYSQG-FNVKITGPGTVFLQSSHVGRL 238
            G+  ++++V L PG+ + A   +  Y   G+   E+Q     G   G     T +   +  + N G A   +  ++P PGK++P DL    G +L +   FLC+    ++     K    G F      L+K+ G+GM ++ AGG  ++K L  GE + V+ GC+VAFA       +   GF       +G F  K+TGPGTV+LQS    RL
Sbjct:   11 GDDLQLVEVELDPGEGVRAEAGTMTYMEQGI---EMQTDTGGGVFQGFKRMLTGESFFITTFMNSGKAKRRVAFAAPYPGKIVPFDLDSFGGQVLCQKDSFLCAARGTEIEIAFTKKIGAGLFGGEGFILQKLSGNGMVFVHAGGTVIRKDLAAGEELRVDTGCLVAFAMTVDYDIQFIGGFKNALFGGEGLFLAKMTGPGTVYLQSLPFSRL 220          
BLAST of mRNA_H-paniculata_contig183.4477.1 vs. uniprot
Match: B7KDN9_GLOC7 (Uncharacterized protein n=1 Tax=Gloeothece citriformis (strain PCC 7424) TaxID=65393 RepID=B7KDN9_GLOC7)

HSP 1 Score: 92.4 bits (228), Expect = 9.590e-19
Identity = 61/216 (28.24%), Postives = 104/216 (48.15%), Query Frame = 0
Query:   25 FMSLGEGSEILQVALAPGDSIVAGERSFCYRGLGLKAAEVQNPNERGAIGRALGWTMKQDKVVKWTNEGTAPTYLGLSSPLPGKVIPVDLRQ-AGAILTKPQMFLCSVTDNQVTTQNLKLTPEGPFPVYHVDLRKVVGSGMCYIQAGGAAVQKTLGRGEAMMVEMGCVVAFAEKCKIVAEQRTGFIREPPYSQG-FNVKITGPGTVFLQSSHVGRL 238
            +   G+  +++++ L  G+ + A   +  Y   G++              RAL    +   +  + N GT    +  ++P PGK+IP+ L Q  G  + +   F+C+    ++  +  K    G F      L+++ G G+ +I AGGA V+K L  GE + V+ GCVVAF+   +   E   GF       +G F  K+TGPGT++LQS  + +L
Sbjct:    7 YQIYGDDLQLVEITLDLGEGVRAEAGAMAYLEQGIEMQTSTGGGFLAGFKRALAG--EGFFITNFANRGTRRAKVAFAAPYPGKIIPLQLGQLGGTFICQKDAFICAAKGIEIDVEFTKRLGTGFFGGEGFILQRLQGDGLAFIHAGGALVEKRLMSGEDIRVDTGCVVAFSPTVRYEIEMVKGFKNVLFGGEGLFLAKLTGPGTIYLQSLPLSKL 220          
BLAST of mRNA_H-paniculata_contig183.4477.1 vs. uniprot
Match: UPI0003FAF81A (TIGR00266 family protein n=1 Tax=Desulfovibrio inopinatus TaxID=102109 RepID=UPI0003FAF81A)

HSP 1 Score: 92.4 bits (228), Expect = 1.460e-18
Identity = 66/238 (27.73%), Postives = 106/238 (44.54%), Query Frame = 0
Query:   25 FMSLGEGSEILQVALAPGDSIVAGERSFCYRGLGLKAAEVQNPNERGAI-GRALGWTMKQDKVVKWTNEGTAPTYLGLSSPLPGKVIPVDL-RQAGAILTKPQMFLCSVTDNQVTTQNLKLTPEGPFPVYHVDLRKVVGSGMCYIQAGGAAVQKTLGRGEAMMVEMGCVVAFAEKCKIVAEQRTGFIREPPYSQG-FNVKITGPGTVFLQSSHVGRLCQSMAVERALVRPAMGDAWKG 259
            +  LG+  +++++ L PG+++ A   +  Y     +   +Q     G   G     T +   +  + N G +   +   +P PGK+IP+DL R  G  L +   +LCS     +     K    G F      L+++ G G+ +I AGG+ V+KTLG GE + V+ GC+    ++     E   GF       +G F   +TGPGTVFLQS    RL   +       +    D   G
Sbjct:    7 YQILGDDMQLVEIELDPGEAVRAETGAMMYM---TRDIAMQTSTGGGLFKGFKRMLTGESFFITTFLNAGNSKAMVAFGAPYPGKIIPLDLARFGGHFLCQKDAYLCSAQGIDIEVAFTKKLGAGLFGGEGFILQRLTGDGLAFIHAGGSIVEKTLGPGEVLRVDTGCLAGLEDRVDYDIEFVGGFKNALFGGEGLFLATLTGPGTVFLQSLPFSRLADRIFAAAKFEQKGQQDGVAG 241          
BLAST of mRNA_H-paniculata_contig183.4477.1 vs. uniprot
Match: A0A2A2YE86_9BACT (TIGR00266 family protein n=2 Tax=Verrucomicrobiae TaxID=203494 RepID=A0A2A2YE86_9BACT)

HSP 1 Score: 93.6 bits (231), Expect = 1.710e-18
Identity = 71/226 (31.42%), Postives = 114/226 (50.44%), Query Frame = 0
Query:   25 FMSLGEGSEILQVALAPGDSIVAGERSFCYRGLGL----KAAEVQNPNERGAIGRALG-----WTMKQDKVVKWTNEGTAPTYLGLSSPLPGKVIPVDLRQAGA-ILTKPQMFLCSVTDNQVTTQNLKLTPEGPFPVYHVDLRKVVGSGMCYIQAGGAAVQKTLGRGEAMMVEMGCVVAFAEKCKIVAEQRTGFIREPPYS-QG-FNVKITGPGTVFLQSSHVGRL 238
            F  LGE  +++++ L PG+++VA   +  Y   G+    K  +   P+  G +G+ +       T +   +  +TN G     +  +SP PG +IPVDL Q G  +L +   FLC+    Q+     K    G F      L+++ G GM +I AGG  V+K L +GE ++V+ GC+VAF  +     E R G ++   +  +G F   + G GTV+LQS   GR+
Sbjct:   80 FTILGESMQMVEIELDPGETVVAEAGAMNYMEDGIAFETKMGDGSQPDS-GFMGKLMAVGKRALTGESLFMTHFTNRGAGKKTVAFASPYPGTIIPVDLSQLGGELLCQRDAFLCAAMGTQIGMAFNKKLGAGLFGGEGFILQRLNGDGMAFIHAGGMVVRKEL-KGEKLLVDTGCLVAFTNQINYSIE-RAGNLKSMVFGGEGLFLATLQGHGTVWLQSLPFGRM 302          
BLAST of mRNA_H-paniculata_contig183.4477.1 vs. uniprot
Match: A0A316CV55_9BACT (Uncharacterized protein (TIGR00266 family) n=1 Tax=Oceanotoga teriensis TaxID=515440 RepID=A0A316CV55_9BACT)

HSP 1 Score: 92.0 bits (227), Expect = 2.070e-18
Identity = 60/218 (27.52%), Postives = 106/218 (48.62%), Query Frame = 0
Query:   25 FMSLGEGSEILQVALAPGDSIVAGERSFCYRGLGLKAAEVQNPNERGAIGRALG--WTMKQDKVVKWTNEGTAPTYLGLSSPLPGKVIPVDLRQA-GAILTKPQMFLCSVTDNQVTTQNLKLTPEGPFPVYHVDLRKVVGSGMCYIQAGGAAVQKTLGRGEAMMVEMGCVVAFAEKCKIVAEQRTGFIREPPYSQG-FNVKITGPGTVFLQSSHVGRL 238
            +  +G+  +++++ L PG+ + A   +  Y    ++   +   N  G + R L   +T +   +  +   G+   ++   +P PGK++P++L    G  + +   FLC+    ++  +  K    G F      L+++ G GM +I AGGA V+K L  GE + V+ GC+V F+       E   GF       +G F  K++GPGTV+LQS    RL
Sbjct:    7 YKIVGDDMQLVEIELDPGEGVRAEAGAMMY----MENDIMMQTNTGGGLFRGLKRMFTGESFFITNFVQNGSGKGHVAFGAPYPGKIVPLNLTDFNGTFICQKDSFLCAANGIEIEIELTKKIGTGLFGGEGFILQRLQGHGMAFIHAGGALVEKQLNAGEILKVDTGCIVGFSNSIHYDIEFIGGFKNALFGGEGMFLAKLSGPGTVYLQSLPFSRL 220          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig183.4477.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIZ3_ECTSI1.840e-9057.60Altered inheritance of mitochondria protein 24, mi... [more]
A0A7Y5PVV1_9PLAN4.300e-2029.86TIGR00266 family protein n=1 Tax=Planctomycetaceae... [more]
A0A2K1NT36_9BACT5.230e-2028.44Uncharacterized protein n=1 Tax=Petrotoga sp. 9PWA... [more]
A0A4U7JC59_9FIRM7.560e-2029.86TIGR00266 family protein n=1 Tax=Ruminiclostridium... [more]
A0A6P5FUF8_ANACO1.190e-1929.54Altered inheritance of mitochondria protein 24, mi... [more]
A0A521RJ11_9GAMM1.990e-1930.99TIGR00266 family protein n=1 Tax=Gammaproteobacter... [more]
B7KDN9_GLOC79.590e-1928.24Uncharacterized protein n=1 Tax=Gloeothece citrifo... [more]
UPI0003FAF81A1.460e-1827.73TIGR00266 family protein n=1 Tax=Desulfovibrio ino... [more]
A0A2A2YE86_9BACT1.710e-1831.42TIGR00266 family protein n=2 Tax=Verrucomicrobiae ... [more]
A0A316CV55_9BACT2.070e-1827.52Uncharacterized protein (TIGR00266 family) n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002838Mitochondrial biogenesis protein AIM24PFAMPF01987AIM24coord: 26..233
e-value: 5.6E-29
score: 101.4
IPR036983Mitochondrial biogenesis AIM24 superfamilyGENE3D3.60.160.10coord: 18..250
e-value: 1.2E-31
score: 111.6
NoneNo IPR availablePANTHERPTHR43657FAMILY NOT NAMEDcoord: 24..246
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 256..274
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..255
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 275..276
NoneNo IPR availableTMHMMTMhelixcoord: 252..274
IPR016031Tryptophan RNA-binding attenuator protein-like domain superfamilySUPERFAMILY51219TRAP-likecoord: 28..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig183contigH-paniculata_contig183:16721..19939 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig183.4477.1mRNA_H-paniculata_contig183.4477.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig183 16396..20183 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig183.4477.1 ID=prot_H-paniculata_contig183.4477.1|Name=mRNA_H-paniculata_contig183.4477.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=277bp
MAANGNNTEAAAPLVEAAATASPRFMSLGEGSEILQVALAPGDSIVAGER
SFCYRGLGLKAAEVQNPNERGAIGRALGWTMKQDKVVKWTNEGTAPTYLG
LSSPLPGKVIPVDLRQAGAILTKPQMFLCSVTDNQVTTQNLKLTPEGPFP
VYHVDLRKVVGSGMCYIQAGGAAVQKTLGRGEAMMVEMGCVVAFAEKCKI
VAEQRTGFIREPPYSQGFNVKITGPGTVFLQSSHVGRLCQSMAVERALVR
PAMGDAWKGATLLVVIVAVLLVFFEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002838AIM24
IPR036983AIM24_sf
IPR016031Trp_RNA-bd_attenuator-like_dom