prot_H-paniculata_contig18292.4473.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18292.4473.1
Unique Nameprot_H-paniculata_contig18292.4473.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length116
Homology
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BLAST of mRNA_H-paniculata_contig18292.4473.1 vs. uniprot
Match: D8LGU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGU4_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 3.730e-34
Identity = 62/92 (67.39%), Postives = 73/92 (79.35%), Query Frame = 0 
Query:    1 GLVTLFLDKERDHLCWCPPGAAELVPDSRYRLNVHDIVEVSPGDENRRRCISLRSSDRPHALVLEIDSDELFDVLYQGFRRILERNKLRLTL 92
            GLVTLFLDKER++LCWCPPGAAELVPD RY L+V  +VEV PGD    R +SLRS+ R + LV E+DSD+L+D+L QG  RILERN LR TL
Sbjct:  339 GLVTLFLDKERENLCWCPPGAAELVPDERYSLSVRSLVEVVPGDSVHPRVLSLRSAGRANPLVFELDSDDLYDILSQGIVRILERNHLRDTL 430
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BLAST of mRNA_H-paniculata_contig18292.4473.1 vs. uniprot
Match: A0A6H5L4E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4E4_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 1.310e-33
Identity = 61/92 (66.30%), Postives = 73/92 (79.35%), Query Frame = 0 
Query:    1 GLVTLFLDKERDHLCWCPPGAAELVPDSRYRLNVHDIVEVSPGDENRRRCISLRSSDRPHALVLEIDSDELFDVLYQGFRRILERNKLRLTL 92
            GLVTLFLDKER++LCWCPPGAAELVPD RY L+V  +VEV PGD    R +SLRS+ R + LV E+DSD+L+D+L +G  RILERN LR TL
Sbjct:  358 GLVTLFLDKERENLCWCPPGAAELVPDERYSLSVRSLVEVVPGDSVHPRVLSLRSTGRANPLVFELDSDDLYDILSEGIVRILERNHLRDTL 449
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18292.4473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGU4_ECTSI3.730e-3467.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4E4_9PHAE1.310e-3366.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18292contigH-paniculata_contig18292:433..1749 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18292.4473.1mRNA_H-paniculata_contig18292.4473.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18292 433..2149 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18292.4473.1 ID=prot_H-paniculata_contig18292.4473.1|Name=mRNA_H-paniculata_contig18292.4473.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=116bp
GLVTLFLDKERDHLCWCPPGAAELVPDSRYRLNVHDIVEVSPGDENRRRC
ISLRSSDRPHALVLEIDSDELFDVLYQGFRRILERNKLRLTLSATNQARV
ANITGDASITQGEVV*
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