prot_H-paniculata_contig18264.4456.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig18264.4456.1
Unique Name	prot_H-paniculata_contig18264.4456.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	107

Homology

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BLAST of mRNA_H-paniculata_contig18264.4456.1 vs. uniprot
Match: D7FT77_ECTSI (Aspartate--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT77_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 2.980e-53
Identity = 88/107 (82.24%), Postives = 99/107 (92.52%), Query Frame = 0

Query:    1 KVLEVFSELFIHIFDGLNRCCKDEIEAVRQQHPFKDLRYSRPTLRLTFQEGIQLLRDAGYDADMDDDLTTVHEKKLGDLVAEKYGTDFFMMDKYPLEVRPFYSMPCP 107
            +VLEVFS+LFI+IFD +NR CK+E+EAVR QHPF+DLRY+RPTLRLTFQEGIQLL DAGYDAD   DL+T HEKKLGDLVAEKYGTDFFMMDKYPL+VRPFY+MPCP
Sbjct:  414 EVLEVFSDLFINIFDEVNRNCKEELEAVRTQHPFEDLRYARPTLRLTFQEGIQLLIDAGYDADPLGDLSTEHEKKLGDLVAEKYGTDFFMMDKYPLDVRPFYTMPCP 520

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BLAST of mRNA_H-paniculata_contig18264.4456.1 vs. uniprot
Match: X1RS97_9ZZZZ (tRNA-synt_2 domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X1RS97_9ZZZZ)

HSP 1 Score: 160 bits (404), Expect = 9.150e-49
Identity = 74/107 (69.16%), Postives = 91/107 (85.05%), Query Frame = 0

Query:    1 KVLEVFSELFIHIFDGLNRCCKDEIEAVRQQHPFKDLRYSRPTLRLTFQEGIQLLRDAGYDADMDDDLTTVHEKKLGDLVAEKYGTDFFMMDKYPLEVRPFYSMPCP 107
            +VLEVFS+LFI IFDGLN+ CK EIE VR+QHPF+DL+Y  PTL++T+ EG +LLR+AG D D  +DL+T +EKKLGD+V EK+GTDFF MDKYPL VRPFY+MPCP
Sbjct:    8 EVLEVFSDLFISIFDGLNQRCKTEIERVREQHPFEDLKYLTPTLKITYAEGCKLLREAGIDQDDYEDLSTPNEKKLGDIVKEKFGTDFFFMDKYPLSVRPFYTMPCP 114

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BLAST of mRNA_H-paniculata_contig18264.4456.1 vs. uniprot
Match: A0A7S1Y1R3_9STRA (Aspartate--tRNA ligase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y1R3_9STRA)

HSP 1 Score: 169 bits (427), Expect = 6.790e-48
Identity = 78/107 (72.90%), Postives = 92/107 (85.98%), Query Frame = 0

Query:    1 KVLEVFSELFIHIFDGLNRCCKDEIEAVRQQHPFKDLRYSRPTLRLTFQEGIQLLRDAGYDADMDDDLTTVHEKKLGDLVAEKYGTDFFMMDKYPLEVRPFYSMPCP 107
            +VLEVFS+LFIHIFDG+N  CKDE+E VR+QHPF+DL+Y RPTL+LT+ EG  LLR+AG D D  +DL+T +EKKLGDLV EKYGTDFF MDKYPL VRPFY+MPCP
Sbjct:  322 EVLEVFSDLFIHIFDGINERCKDELERVREQHPFEDLKYLRPTLKLTYAEGCALLREAGVDQDDYEDLSTKNEKKLGDLVKEKYGTDFFFMDKYPLSVRPFYTMPCP 428

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BLAST of mRNA_H-paniculata_contig18264.4456.1 vs. uniprot
Match: A0A1E7FID9_9STRA (Aspartate--tRNA ligase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FID9_9STRA)

HSP 1 Score: 169 bits (427), Expect = 2.290e-47
Identity = 79/107 (73.83%), Postives = 92/107 (85.98%), Query Frame = 0

Query:    1 KVLEVFSELFIHIFDGLNRCCKDEIEAVRQQHPFKDLRYSRPTLRLTFQEGIQLLRDAGYDADMDDDLTTVHEKKLGDLVAEKYGTDFFMMDKYPLEVRPFYSMPCP 107
            +VL+VFS+LFIHIFDGLN+ CK EIEAVR+QHPF+DL+Y  PTL+LT+ EG  LLR AG D D  DDL+T +EKKLGDLV+EKYGTDFF MDKYPL VRPFY+MPCP
Sbjct:  409 EVLDVFSDLFIHIFDGLNKRCKTEIEAVREQHPFEDLKYLNPTLKLTYAEGCALLRSAGVDQDDYDDLSTENEKKLGDLVSEKYGTDFFFMDKYPLSVRPFYTMPCP 515

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BLAST of mRNA_H-paniculata_contig18264.4456.1 vs. uniprot
Match: A0A448Z4S0_9STRA (Aspartate--tRNA ligase n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448Z4S0_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.240e-43
Identity = 75/107 (70.09%), Postives = 91/107 (85.05%), Query Frame = 0

Query:    1 KVLEVFSELFIHIFDGLNRCCKDEIEAVRQQHPFKDLRYSRPTLRLTFQEGIQLLRDAGYDADMDDDLTTVHEKKLGDLVAEKYGTDFFMMDKYPLEVRPFYSMPCP 107
            +VL++FSELFIHIFDGLN+ CK E+EAVR+QHPF+DLRY  PTL+LT+ EG  LLR+AG +    +DL+T +EK LGDLVAEKYGTDFF MDKYPL+VRPFY+MP P
Sbjct:  410 EVLDLFSELFIHIFDGLNKHCKRELEAVREQHPFEDLRYCNPTLKLTYAEGCALLREAGVEQGDYEDLSTENEKLLGDLVAEKYGTDFFFMDKYPLDVRPFYTMPDP 516

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BLAST of mRNA_H-paniculata_contig18264.4456.1 vs. uniprot
Match: A0A7S1D4Z3_CYCTE (Aspartate--tRNA ligase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D4Z3_CYCTE)

HSP 1 Score: 155 bits (393), Expect = 5.170e-43
Identity = 72/107 (67.29%), Postives = 90/107 (84.11%), Query Frame = 0

Query:    1 KVLEVFSELFIHIFDGLNRCCKDEIEAVRQQHPFKDLRYSRPTLRLTFQEGIQLLRDAGYDADMDDDLTTVHEKKLGDLVAEKYGTDFFMMDKYPLEVRPFYSMPCP 107
            +VL+VFS+LFI+IFDG+N  CK E+E VR+QHPF+DL Y RPTL+LT+ EG  +LR+AG D D  +DL+T +EKKLG+LV +KYGTDFF MDKYPLEVRPFY+MP P
Sbjct:  311 EVLDVFSDLFIYIFDGINERCKSELERVREQHPFEDLTYLRPTLKLTYAEGCAMLREAGVDQDDYEDLSTENEKKLGELVKQKYGTDFFFMDKYPLEVRPFYTMPDP 417

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BLAST of mRNA_H-paniculata_contig18264.4456.1 vs. uniprot
Match: A0A7S1UJ39_9STRA (Aspartate--tRNA ligase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJ39_9STRA)

HSP 1 Score: 152 bits (385), Expect = 5.220e-43
Identity = 71/107 (66.36%), Postives = 87/107 (81.31%), Query Frame = 0

Query:    1 KVLEVFSELFIHIFDGLNRCCKDEIEAVRQQHPFKDLRYSRPTLRLTFQEGIQLLRDAGYDADMDDDLTTVHEKKLGDLVAEKYGTDFFMMDKYPLEVRPFYSMPCP 107
            +VLEVFS LF +IFDGLN   +DEIEAVR Q+PF+DL+Y  P+LR+TFQEG+ LLR+AGY+ D ++D TT  EK LG +V EKY TDF+MMDKYPL  RPFY+MPCP
Sbjct:  163 EVLEVFSNLFCYIFDGLNERYRDEIEAVRSQYPFEDLKYKNPSLRITFQEGMALLREAGYEVDDNEDPTTEQEKALGRIVKEKYDTDFYMMDKYPLAARPFYTMPCP 269

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BLAST of mRNA_H-paniculata_contig18264.4456.1 vs. uniprot
Match: A0A7S0CMP8_9STRA (Aspartate--tRNA ligase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CMP8_9STRA)

HSP 1 Score: 154 bits (388), Expect = 2.110e-42
Identity = 71/107 (66.36%), Postives = 88/107 (82.24%), Query Frame = 0

Query:    1 KVLEVFSELFIHIFDGLNRCCKDEIEAVRQQHPFKDLRYSRPTLRLTFQEGIQLLRDAGYDADMDDDLTTVHEKKLGDLVAEKYGTDFFMMDKYPLEVRPFYSMPCP 107
            +VL+VFS+LFIHIFDGLN  C  EIE VR+QHPF+DL+Y RPTL++T+ EG  LLR+AG + D  +DL+T +EKKLG +V +KY TDFF MDKYPL VRPFY+MPCP
Sbjct:  295 EVLQVFSDLFIHIFDGLNTRCAAEIERVREQHPFEDLKYLRPTLKITYAEGCALLREAGIEQDDYEDLSTENEKKLGGIVKQKYDTDFFFMDKYPLSVRPFYTMPCP 401

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BLAST of mRNA_H-paniculata_contig18264.4456.1 vs. uniprot
Match: A0A7S2ERB4_TRICV (Aspartate--tRNA ligase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ERB4_TRICV)

HSP 1 Score: 155 bits (392), Expect = 2.530e-42
Identity = 72/107 (67.29%), Postives = 90/107 (84.11%), Query Frame = 0

Query:    1 KVLEVFSELFIHIFDGLNRCCKDEIEAVRQQHPFKDLRYSRPTLRLTFQEGIQLLRDAGYDADMDDDLTTVHEKKLGDLVAEKYGTDFFMMDKYPLEVRPFYSMPCP 107
            +VLEVFS++FI +FDG+N  CK+E+E VR+QHPF+DL+Y RPTL++T+ EG +LLRDAG D    DDL+T +EKKLGD+V EKYGTDFF MDKYPL VRPFY+MP P
Sbjct:  414 EVLEVFSDMFIAMFDGINERCKNELERVREQHPFEDLKYLRPTLKITYAEGCKLLRDAGVDQGDLDDLSTENEKKLGDIVKEKYGTDFFFMDKYPLAVRPFYTMPDP 520

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BLAST of mRNA_H-paniculata_contig18264.4456.1 vs. uniprot
Match: A0A7S4JC71_9STRA (Aspartate--tRNA ligase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JC71_9STRA)

HSP 1 Score: 155 bits (391), Expect = 3.370e-42
Identity = 71/107 (66.36%), Postives = 89/107 (83.18%), Query Frame = 0

Query:    1 KVLEVFSELFIHIFDGLNRCCKDEIEAVRQQHPFKDLRYSRPTLRLTFQEGIQLLRDAGYDADMDDDLTTVHEKKLGDLVAEKYGTDFFMMDKYPLEVRPFYSMPCP 107
            +VL VFS+LFI IFDG+N  C +E+E +R+QHPF+DL+Y RPTL++T+ EG +LLRDAG D D  +DL+T +EKKLGD+V EKYGTDFF MDKYPL VRPFY+MP P
Sbjct:  410 EVLNVFSDLFISIFDGINERCSNELERIREQHPFEDLKYLRPTLKITYAEGCKLLRDAGVDQDDLEDLSTENEKKLGDIVKEKYGTDFFFMDKYPLSVRPFYTMPDP 516

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig18264.4456.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig18264.4456.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FT77_ECTSI	2.980e-53	82.24	Aspartate--tRNA ligase n=2 Tax=Ectocarpus TaxID=28...	[more]
X1RS97_9ZZZZ	9.150e-49	69.16	tRNA-synt_2 domain-containing protein (Fragment) n...	[more]
A0A7S1Y1R3_9STRA	6.790e-48	72.90	Aspartate--tRNA ligase n=1 Tax=Grammatophora ocean...	[more]
A0A1E7FID9_9STRA	2.290e-47	73.83	Aspartate--tRNA ligase n=1 Tax=Fragilariopsis cyli...	[more]
A0A448Z4S0_9STRA	1.240e-43	70.09	Aspartate--tRNA ligase n=2 Tax=Pseudo-nitzschia Ta...	[more]
A0A7S1D4Z3_CYCTE	5.170e-43	67.29	Aspartate--tRNA ligase n=1 Tax=Cyclophora tenuis T...	[more]
A0A7S1UJ39_9STRA	5.220e-43	66.36	Aspartate--tRNA ligase n=2 Tax=Phaeomonas parva Ta...	[more]
A0A7S0CMP8_9STRA	2.110e-42	66.36	Aspartate--tRNA ligase n=1 Tax=Proboscia inermis T...	[more]
A0A7S2ERB4_TRICV	2.530e-42	67.29	Aspartate--tRNA ligase n=1 Tax=Trieres chinensis T...	[more]
A0A7S4JC71_9STRA	3.370e-42	66.36	Aspartate--tRNA ligase n=2 Tax=Odontella aurita Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004364	Aminoacyl-tRNA synthetase, class II (D/K/N)	PFAM	PF00152	tRNA-synt_2	coord: 2..105 e-value: 2.7E-5 score: 23.4
None	No IPR available	GENE3D	3.30.930.10		coord: 1..107 e-value: 8.1E-22 score: 79.8
None	No IPR available	PANTHER	PTHR43450:SF1	ASPARTATE--TRNA LIGASE, CYTOPLASMIC	coord: 2..107
None	No IPR available	SUPERFAMILY	55681	Class II aaRS and biotin synthetases	coord: 3..107
IPR004523	Aspartate-tRNA synthetase, type 2	PANTHER	PTHR43450	FAMILY NOT NAMED	coord: 2..107

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig18264	contig	H-paniculata_contig18264:844..1852 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig18264.4456.1	mRNA_H-paniculata_contig18264.4456.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig18264 844..1852 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig18264.4456.1 ID=prot_H-paniculata_contig18264.4456.1|Name=mRNA_H-paniculata_contig18264.4456.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=107bp
KVLEVFSELFIHIFDGLNRCCKDEIEAVRQQHPFKDLRYSRPTLRLTFQE
GIQLLRDAGYDADMDDDLTTVHEKKLGDLVAEKYGTDFFMMDKYPLEVRP
FYSMPCP

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004364	aa-tRNA-synt_II
IPR004523	Asp-tRNA_synthase_2