mRNA_H-paniculata_contig1825.4447.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1825.4447.1 vs. uniprot
Match: D7FPB8_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPB8_ECTSI) HSP 1 Score: 406 bits (1044), Expect = 4.530e-131 Identity = 223/416 (53.61%), Postives = 275/416 (66.11%), Query Frame = 1
Query: 1 GLSADEASTLDSVAICGDRNGVILAFLRHSKFNVKKAKESMRRCCKWRRETEADSMFARGASSAKVRKHRKHWPTGFHREDREGRPVFYDRVGQVDLATLCAEPDGLDMDDMVQIFCQNMEV----KNPSYNYCL--------LSRMTQSRAMSAPPRRVERNMIPFLETC-----------------------GEGTVRPKTFRGRFDSVTLSKY-HPRFCCCVSPQYDFFNTSRWRPAVSSLNPKSCKARRRFVLTRLSREAGCPVDQTTTVLDLSGMGMKHM--SKDALTYTRRISDIFQDNYSGMTTSLLVVNTPWVFSTGWQMIQGFLSEDTAAKVKVLGKGEAGLEKLAEYIPTENIPDFLGGPSRTTMGPEDPLWAEVDRATLAWANGSDPFVDKRALRAVGARLRKER 1134
GLS +E L++VAICGDR+GV+LAFLRHSKF+V+KAKESMRRCC WR+E EAD +F R S AK++K+R HWPTGFH++DR GRPVFYDRVGQ DL+ L +PDGLD D+MVQIF QNME+ +N Y LSR+T A ++V +M L+ C GE T R + + TL K HP+ ++P + S R V L + RRRFVLTRLSREAG PVDQ TTVLDL+G+GMKHM +K+A+ YTRRISDIFQDNYSGMT SLL++N PWVFS GWQ+++ FLSEDT AKVKVLGKGEAGL++L EYIP ENIP+FLGG SR +GP DPLW++ DRA W + DPF+D ++ V R+ ER
Sbjct: 227 GLSEEEVEALNTVAICGDRDGVVLAFLRHSKFDVRKAKESMRRCCAWRKENEADDLFKRAVSPAKMKKYRTHWPTGFHKQDRAGRPVFYDRVGQSDLSKLREDPDGLDQDEMVQIFTQNMEILKMPENQQYAVLAEMRPLIGELSRLTALDPALAAGQKVVLDMATALDHCEHIIQPDTGAMWLHEELLSPSEEGEQTDREQIVK---QLTTLFKLVHPKGLPGLAPGGSEASASSRRQRVQLL----MQVRRRFVLTRLSREAGRPVDQMTTVLDLTGLGMKHMRQAKEAMAYTRRISDIFQDNYSGMTCSLLILNAPWVFSKGWQVVESFLSEDTVAKVKVLGKGEAGLQQLEEYIPKENIPEFLGGESRAVIGPSDPLWSDFDRAVRLWGDDGDPFLDPSEVKRVSRRIAGER 635
BLAST of mRNA_H-paniculata_contig1825.4447.1 vs. uniprot
Match: A0A6H5JMA2_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA2_9PHAE) HSP 1 Score: 379 bits (974), Expect = 1.640e-120 Identity = 199/380 (52.37%), Postives = 240/380 (63.16%), Query Frame = 1
Query: 1 GLSADEASTLDSVAICGDRNGVILAFLRHSKFNVKKAKESMRRCCKWRRETEADSMFARGASSAKVRKHRKHWPTGFHREDREGRPVFYDRVGQVDLATLCAEPDGLDMDDMVQIFCQNMEVKNPSYNYCLLSRMTQSRAMSAPPRRVERNMIPFLETCGEGTVRPKTFRGRFDSVTLSKYHPRFCCCVSPQYDFFNTSRWRPAVSSLNPKSCKARRRFVLTRLSREAGCPVDQTTTVLDLSGMGMKHM--SKDALTYTRRISDIFQDNYSGMTTSLLVVNTPWVFSTGWQMIQGFLSEDTAAKVKVLGKGEAGLEKLAEYIPTENIPDFLGGPSRTTMGPEDPLWAEVDRATLAWANGSDPFVDKRALRAVGARLRKER 1134
GLS +E L++VAICGDR+GV+LAFLRHSKF+V+KAKESMRRCC WR+E EAD +F R S AK++K+R HWPTGFH++DR GRPVFYDRVGQ DL+ L +PDGLD D+MVQIF QNMEV RRRFVLTRLSREAG PVDQ TTVLDL+G+GMKHM +K+A+ YTRRISD+FQDNYSGMT+SLL++N PWVFS GWQ+++ FLSEDT AKVKVLGKGEAGL++L EYIP ENIP+FLGG SR +GP DPLW++VDRA W + DPF+D ++ V R+ +ER
Sbjct: 363 GLSEEEVEALNTVAICGDRDGVVLAFLRHSKFDVRKAKESMRRCCAWRKENEADDLFKRAVSPAKMKKYRTHWPTGFHKQDRAGRPVFYDRVGQSDLSKLREDPDGLDQDEMVQIFTQNMEV---------------------------------------------------------------------------------------------RRRFVLTRLSREAGRPVDQMTTVLDLTGLGMKHMRQAKEAMAYTRRISDVFQDNYSGMTSSLLILNAPWVFSKGWQVVESFLSEDTVAKVKVLGKGEAGLKQLEEYIPKENIPEFLGGESRAVIGPSDPLWSDVDRAVRLWGDDGDPFLDPSEVKRVSRRIARER 649
BLAST of mRNA_H-paniculata_contig1825.4447.1 vs. uniprot
Match: A0A836C941_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C941_9STRA) HSP 1 Score: 180 bits (457), Expect = 2.640e-47 Identity = 115/382 (30.10%), Postives = 164/382 (42.93%), Query Frame = 1
Query: 4 LSADEASTLDSVAICGDRNGVILAFLRHSKFNVKKAKESMRRCCKWRRETEADSMFARGASSAKVRKHRKHWPTGFHREDREGRPVFYDRVGQVDLATLCAEPDGLDMDDMVQIFCQNMEVKNPSYNYCLLSRMTQSRAMSAPPRRVERNMIPFLETCGEGTVRPKTFRGRFDSVTLSKYHPRFCCCVSPQYDFFNTSRWRPAVSSLNPKSCKARRRFVLTRLSREAGCPVDQTTTVLDLSGMGMKHMSKDALTYTR-----------------RISDIFQDNYSGMTTSLLVVNTPWVFSTGWQMIQGFLSEDTAAKVKVLGKGEAGLEKLA---EYIPTENIPDFLGGPSRTTMGPEDPLWAEVDRATLAWANGSDPFVD 1089
L +++ L +V +CGD +G++L+FLR SK++++KAK+ MR +WRR+ A++MFAR K+ +HR+HWPT FH DREGRPV YDR+G D+ + +P GL +D++V I+C NMEV RRR +L +SR G PV Q TVLDL G+G +H+S A Y R + IF NY M L +VN PW F+ W+ Q LS T ++ L+ + I E+IP LGG S +GP++P+W E+D A A + F D
Sbjct: 204 LPSEDLEALAAVVMCGDTDGMLLSFLRPSKYDLEKAKDLMRAAARWRRDNAANAMFARRPPPHKLARHRRHWPTSFHGLDREGRPVLYDRIGSADVGAMLRDPGGLTLDEVVLIYCLNMEV---------------------------------------------------------------------------------------------RRRLILPEMSRAHGRPVTQFVTVLDLKGIGARHLSVAARAYIRGRIXXXXXXXXXXXXMAAVGAIFDVNYRDMVARLYIVNAPWAFAAAWRAAQAVLSAHTLEXXXXXXXXXXXIQVLSNLEDVIAPEHIPRELGGLSPAAIGPDNPMWLEIDAAMARLAGETSGFND 492
BLAST of mRNA_H-paniculata_contig1825.4447.1 vs. uniprot
Match: A0A7R9Y9D9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9D9_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 1.350e-18 Identity = 45/159 (28.30%), Postives = 84/159 (52.83%), Query Frame = 1
Query: 646 RRRFVLTRLSREAGCPVDQTTTVLDLSGMGMKHMSKDALTYTRRISDIFQDNYSGMTTSLLVVNTPWVFSTGWQMIQGFLSEDTAAKVKVLGKGEAGLEKLAEYIPTENIPDFLGGPSRTTMGPEDP----------LWAEVDRATLAWANGSDPFVDK 1092
+RR++L +LSR+AG V + + +LDL+G+ + S Y +RIS F +NY + +++V N P +F W +++GF+ ++T KV++L + E++ + + +P F GG S +G +D ++DRA G P +++
Sbjct: 6 KRRYLLPKLSRQAGRRVGRFSVLLDLTGLDGRFFSTSVFGYLQRISKAFSNNYEELQHTIVVANAPRIFQRFWSLVKGFVPKETLQKVRILDSNKPAAEQIGDLVEVSQLPQFFGGTSLCGIGEKDDGGFKLDSGAAYERDIDRAKQWLREGKQPEIEE 164
BLAST of mRNA_H-paniculata_contig1825.4447.1 vs. uniprot
Match: A0A7N2RDR5_QUELO (CRAL-TRIO domain-containing protein n=5 Tax=Fagaceae TaxID=3503 RepID=A0A7N2RDR5_QUELO) HSP 1 Score: 93.6 bits (231), Expect = 4.270e-17 Identity = 81/314 (25.80%), Postives = 119/314 (37.90%), Query Frame = 1
Query: 52 DRNGVILAFLRHSKFNVKKAKESMRRCCKWRRETEADSMFARGASSAKVRKHRKHWPTGFHREDREGRPVFYDRVGQVDLATLCAEPDGLDMDDMVQIFCQNMEVKNPSYNYCLLSRMTQSRAMSAPPRRVERNMIPFLETCGEGTVRPKTFRGRFDSVTLSKYHPRFCCCVSPQYDFFNTSRWRPAVSSLNPKSCKARRRFVLTRLSREAGCPVDQTTTVLDLSGMGMKHMSKDALTYTRRISDIFQDNYSGMTTSLLVVNTPWVFSTGWQMIQGFLSEDTAAKVKVLGKGEAGLEKLAEYIPTENIPDFLGG 993
D + ++L FLR KF+++K K+ +WR+E EAD++ ++ + K++P G H D+EGRPV+ +R+GQVD L M+V T R + R ER L C S+ K +DQ+TT+LD+ G+G+KH+SK A R+ I DNY + ++N F W ++ FL TAAK+ VLG KL E I +PDF GG
Sbjct: 96 DDHHMMLRFLRARKFDIEKTKQMWTDMLQWRKEYEADTIME-DFEFKEIDEVLKYYPQGHHGVDKEGRPVYIERLGQVDSTKL-------------------MQVT------------TMDRYLKYHVREFERTFAVKLPAC---------------SIAAKKL--------------------------------------------------IDQSTTILDVQGVGLKHLSKSARELLLRLQKIDGDNYPESLNRMFIINAGSGFRILWNTVKSFLDPKTAAKIHVLGNKYQS--KLLEIIDASELPDFFGG 310
BLAST of mRNA_H-paniculata_contig1825.4447.1 vs. uniprot
Match: A0A2N9J3G4_FAGSY (CRAL-TRIO domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9J3G4_FAGSY) HSP 1 Score: 92.4 bits (228), Expect = 1.060e-16 Identity = 82/314 (26.11%), Postives = 120/314 (38.22%), Query Frame = 1
Query: 52 DRNGVILAFLRHSKFNVKKAKESMRRCCKWRRETEADSMFARGASSAKVRKHRKHWPTGFHREDREGRPVFYDRVGQVDLATLCAEPDGLDMDDMVQIFCQNMEVKNPSYNYCLLSRMTQSRAMSAPPRRVERNMIPFLETCGEGTVRPKTFRGRFDSVTLSKYHPRFCCCVSPQYDFFNTSRWRPAVSSLNPKSCKARRRFVLTRLSREAGCPVDQTTTVLDLSGMGMKHMSKDALTYTRRISDIFQDNYSGMTTSLLVVNTPWVFSTGWQMIQGFLSEDTAAKVKVLGKGEAGLEKLAEYIPTENIPDFLGG 993
D + ++L FLR KF+++KAK+ +WR+E EAD++ ++ + K++P G H D+EGRPV+ +R+GQVD P+ L L T R + R ER L C S+ K+ +DQ+TT+LD+ G+G+K+ SK A +RI I DNY + ++N F W I+ FL T AK+ VLG KL E I +PDF GG
Sbjct: 96 DDHHMMLRFLRARKFDIEKAKQMWTDMLQWRKEFEADTIME-DFDFQEIDEVLKYYPQGHHGVDKEGRPVYIERLGQVD-------PNKL------------------------LQVTTMDRYLKYHVREFERTFAVKLPAC---------------SIAAKKH--------------------------------------------------IDQSTTILDVQGVGLKNFSKSARELIQRIQKIDGDNYPESLHRMFIINAGSGFRLLWNTIKSFLDPKTTAKIHVLGNKYQS--KLLEVIDASELPDFFGG 310
BLAST of mRNA_H-paniculata_contig1825.4447.1 vs. uniprot
Match: A0A0G4FEM2_VITBC (CRAL-TRIO domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FEM2_VITBC) HSP 1 Score: 90.1 bits (222), Expect = 1.090e-16 Identity = 81/350 (23.14%), Postives = 145/350 (41.43%), Query Frame = 1
Query: 67 ILAFLRHSKFNVKKAKESMRRCCKWRRETEADSMFARGASSAKVRKHRKHWPTGFHREDREGRPVFYDRVGQVDLATLCAEPDGLDMDDMVQIFCQNMEVKNPSYNYCLLSRMTQSRAMSAPPRRVERNMIPFLETCGEGTVRPKTFRGRFDSVTLSKYHPRFCCCVSPQYDFFNTSRWRPAVSSLNPKSCKARRRFVLTRLSREAGCPVDQTTTVLDLSGMGMKHMSKDALTYTRRISDIFQDNYSGMTTSLLVVNTPWVFSTGWQMIQGFLSEDTAAKVKVLGKGEAGLEKLAEYIPTENIPDFLGGPSRTTMGPEDPLWAEVDRATLAWANG--SDPFV--DKRALR 1104
+L FLR KF++ K+ ++ KWR E D + G + R RK +P G+H ++GRP++ +R+G +D+A+L + + + +++ + Q+ E LE RF C S ++G + Q+ TVLDLSG+G++H T ++++ + QD Y ++++VNTP VF+ WQ ++ L E T K+++ G ++ L+++ + +PDFLGG ++ + PE+ W ++W G +DP + D R LR
Sbjct: 37 LLRFLRARKFDLDKSLIMIKNYIKWREEFGVDRIVNEG-EFPETRVIRKFYPHGYHGVAKDGRPIYVERIGSIDVASLL---ENCNFERLLEYWVQDYE--------------------------------KLLEV-------------------------RFPAC------------------------------------SVKSGKRISQSLTVLDLSGLGLRHFGTQTRTIVKKLTGVCQDYYPESLGNMIIVNTPTVFNVIWQFVKPLLDEKTVKKIQLCGDIKSFKPILSQFADDDQLPDFLGGTNKYS-NPEE--W-------MSWNRGPWNDPKILEDLRRLR 279
BLAST of mRNA_H-paniculata_contig1825.4447.1 vs. uniprot
Match: UPI001929B2E4 (phosphatidylinositol/phosphatidylcholine transfer protein SFH3-like n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929B2E4) HSP 1 Score: 90.5 bits (223), Expect = 4.880e-16 Identity = 80/311 (25.72%), Postives = 125/311 (40.19%), Query Frame = 1
Query: 64 VILAFLRHSKFNVKKAKESMRRCCKWRRETEADSMFARGASSAKVRKHRKHWPTGFHREDREGRPVFYDRVGQVDLATLCAEPDGLDMDDMVQIFCQNMEVKNPSYNYCLLSRMTQSRAMSAPPRRVERNMIPFLETCGEGTVRPKTFRGRFDSVTLS-KYHPRFCCCVSPQYDFFNTSRWRPAVSSLNPKSCKARRRFVLTRLSREAGCPVDQTTTVLDLSGMGMKHMSKDALTYTRRISDIFQDNYSGMTTSLLVVNTPWVFSTGWQMIQGFLSEDTAAKVKVLGKGEAGLEKLAEYIPTENIPDFLGG 993
++L FLR KF+++KAK+ +WR+E +AD++ A++ + +H+P G H D++GRPV+ +R+GQ+D+ L M+V T R + + ER TF+ +F + +L+ K H +DQ+TT+LD+ G+G KH++K A R+ I DNY + ++N F W I+ FL T AK+ VLG KL E I +PDFLGG
Sbjct: 108 MMLRFLRARKFDIEKAKQMWSDMLQWRKEFDADAILE-DFEFAEIDQVLQHYPQGHHGVDKQGRPVYIERLGQIDVNKL-------------------MQVT------------TMDRYVKYHVKEFER-----------------TFKVKFPACSLAAKKH-------------------------------------------------IDQSTTILDVQGVGYKHLTKTARELIGRLQKIDGDNYPETLNQMFIINAGNGFRLLWNTIKTFLDPKTTAKIHVLGNKYQS--KLLEVIDASELPDFLGG 318
BLAST of mRNA_H-paniculata_contig1825.4447.1 vs. uniprot
Match: B6K2U6_SCHJY (Sec14 cytosolic factor family Sec14 n=1 Tax=Schizosaccharomyces japonicus (strain yFS275 / FY16936) TaxID=402676 RepID=B6K2U6_SCHJY) HSP 1 Score: 87.8 bits (216), Expect = 6.230e-16 Identity = 83/333 (24.92%), Postives = 125/333 (37.54%), Query Frame = 1
Query: 58 NGVILAFLRHSKFNVKKAKESMRRCCKWRRETEADSMFARGASSAKVRKHRKHWPTGFHREDREGRPVFYDRVGQVDLATLCAEPDGLDMDDMVQIFCQNMEVKNPSYNYCLLSRMTQSRAMSAPPRRVERNMIPFLETCGEGTVRPKTFRGRFDSVTLSKYHPRFCCCVSPQYDFFNTSRWRPAVSSLNPKSCKARRRFVLTRLSREAGCPVDQTTTVLDLSGMGMKHMSKDALTYTRRISDIFQDNYSGMTTSLLVVNTPWVFSTGWQMIQGFLSEDTAAKVKVLGKGEAGLEKLAEYIPTENIP-------DFLGGPSRTTMGP-EDPLW 1032
+ +L FLR KFN+ + E C KWR E D + K + ++P +H+ D+EGRPV+ +++G++DL M QI Q ++N Y Y +L+ RF C SR +G ++ + T++DL G+G+ + +Y ++ S I QD Y L +VN PW FS+ + +I+GFL EDT K+ VLG + L IP EN+P D GG + GP DP W
Sbjct: 53 DATLLRFLRARKFNIHQMLEMFTNCEKWRTEFGVDDLVKNFKYEEKEAVFQ-YYPQFYHKTDKEGRPVYIEQLGKIDLKK------------MYQITTQERMLQNLVYEYEVLAE------------------------------------------------ERFPAC------------------------------------SRMSGGLIETSCTIMDLKGVGLTSIHS-VYSYVKQASRISQDYYPERMGKLYLVNAPWGFSSAFNLIKGFLDEDTVKKIHVLGSSYQ--KHLLAQIPAENLPLRFGGKCDCPGGCEFSDAGPWHDPQW 285
BLAST of mRNA_H-paniculata_contig1825.4447.1 vs. uniprot
Match: A0A833RBS7_9POAL (Phosphatidylinositol/phosphatidylcholine transfer protein SFH3-like protein n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833RBS7_9POAL) HSP 1 Score: 88.6 bits (218), Expect = 2.000e-15 Identity = 82/311 (26.37%), Postives = 120/311 (38.59%), Query Frame = 1
Query: 64 VILAFLRHSKFNVKKAKESMRRCCKWRRETEADSMFARGASSAKVRKHRKHWPTGFHREDREGRPVFYDRVGQVDLATLCAEPDGLDMDDMVQIFCQNMEVKNPSYNYCLLSRMTQSRAMSAPPRRVERNMIPFLETCGEGTVRPKTFRGRFDSVTLS-KYHPRFCCCVSPQYDFFNTSRWRPAVSSLNPKSCKARRRFVLTRLSREAGCPVDQTTTVLDLSGMGMKHMSKDALTYTRRISDIFQDNYSGMTTSLLVVNTPWVFSTGWQMIQGFLSEDTAAKVKVLGKGEAGLEKLAEYIPTENIPDFLGG 993
++L FL+ KF+++K KE +WR+E AD++ +V + K++P G H D+EGRPV+ +R+GQVD L MEV T R + R E KTF +F + +++ K H +DQ+TT+LD+ G+GMKH SK A R+ I DNY + ++N F W ++ FL T AK+ VLG KL E I +P+FLGG
Sbjct: 104 MLLRFLKARKFDIEKTKEMWTNMLQWRKEFGADAIMDE-FEFKEVDEVVKYYPQGNHGVDKEGRPVYIERLGQVDATKL-------------------MEVT------------TMDRYVQYHVREFE-----------------KTFAVKFPACSIAAKRH-------------------------------------------------IDQSTTILDVQGVGMKHFSKLARELIGRLQKIDSDNYPETLNRMFIINAGQGFRLLWNSVKSFLDPKTTAKIHVLGNKYQS--KLLEIIDASELPEFLGG 314 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1825.4447.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1825.4447.1 >prot_H-paniculata_contig1825.4447.1 ID=prot_H-paniculata_contig1825.4447.1|Name=mRNA_H-paniculata_contig1825.4447.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=378bp GLSADEASTLDSVAICGDRNGVILAFLRHSKFNVKKAKESMRRCCKWRREback to top mRNA from alignment at H-paniculata_contig1825:466..6151- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1825.4447.1 ID=mRNA_H-paniculata_contig1825.4447.1|Name=mRNA_H-paniculata_contig1825.4447.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5686bp|location=Sequence derived from alignment at H-paniculata_contig1825:466..6151- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1825:466..6151- >mRNA_H-paniculata_contig1825.4447.1 ID=mRNA_H-paniculata_contig1825.4447.1|Name=mRNA_H-paniculata_contig1825.4447.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2268bp|location=Sequence derived from alignment at H-paniculata_contig1825:466..6151- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |