prot_H-paniculata_contig1824.4445.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1824.4445.1
Unique Nameprot_H-paniculata_contig1824.4445.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length386
Homology
BLAST of mRNA_H-paniculata_contig1824.4445.1 vs. uniprot
Match: A0A6H5JNJ8_9PHAE (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNJ8_9PHAE)

HSP 1 Score: 296 bits (758), Expect = 4.960e-94
Identity = 182/400 (45.50%), Postives = 247/400 (61.75%), Query Frame = 0
Query:   10 TKVWKELRVLGKS--PPLN--------DQD---LYEDHVAYESLRQVSITVAPLAELPRQHFITFFSMLVDGPLLDELVDLLKGSRR--HPALQYATLLVLHGVVELVDKRLVILSRQDVVEELLHVLASPQRRRITPPTSFP---YFVNSAGGAMSTITGLFTSNTPGLEPRYARVWIDLGAVPSLASGLESHSEFDQSSTLTADIPLLMFAIATSLLASAASAGVPIKTGDKVRLSVAILTLFIDRTEWISEHASMNLASLFSTVEWLLPAVDRIPVELRKRAVATARRCELAG-----GAWKSGDADAVALALSGGNAKLQDS---LFGKMCAGPGCGNVQQ---QEGAPSKTAAVATASKGVFATVFKRCSRCHTKLYCSRECQAAHWKVGHKREC 380
            +K+W+ELR L     PP++        DQ+    Y+D  A+ +  +V + +   + LPR  F+  F  LV GP LDEL++L K SR   HPALQYA L+ LHGV EL D+R  +L+R DVV+EL  V+ASP++R +TP ++       VN+A GA++TITGLFTSN P LEP YA++W++LGAV +LAS LE+H+ FD+S+ ++ D+PL  F IATSLLA AA +   +   DK+RL  A LT+F++ T WI++ A+  LA  ++   WL   V+R+P +LR  AVA AR CE  G       WK G AD +ALAL  GNA   D+   L G+ CAGP C  VQ+     G P   A+      G  +  FKRCS+CH   YCSRECQ A WK  H++ C
Sbjct:    9 SKIWQELRKLRDDIPPPVDNNTGSNKGDQESSTCYKDFAAFAACNEVRVAIGRSSALPRDQFLAIFRQLVAGPRLDELLELFKFSRSPPHPALQYACLVALHGVAELSDRRKDLLTRPDVVKELCAVMASPRQRLVTPTSAGAGGVEIVNAAAGAVTTITGLFTSNGP-LEPPYAKLWVELGAVSALASCLENHAVFDRSNPVSGDLPLCFFLIATSLLAGAADS---VSEEDKLRLGKAWLTVFLEATRWIADEAADLLADFYTRPNWLKNIVERMPEKLRASAVAAARECEREGTGSGSSPWKGGKADRLALALLCGNAYNWDAGGELVGRRCAGPRCDRVQKCGHGGGNPHPAASEDEGGDGAASVAFKRCSQCHAVGYCSRECQKAGWKK-HRKAC 403          
BLAST of mRNA_H-paniculata_contig1824.4445.1 vs. uniprot
Match: A0A6H5KPW0_9PHAE (MYND-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPW0_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 9.640e-31
Identity = 121/423 (28.61%), Postives = 194/423 (45.86%), Query Frame = 0
Query:   12 VWKELRVLGKSPPLNDQDLYEDHVAYESLRQVSITVAPLAELPRQHFITFFSMLVDGPLLDELVDLLKGSRRHPALQYATLLVLHGVVELVDKRLVILSRQDVVEELLHVLASPQRRRITPPTSFPYFVNSAGGAMSTITGLFTSNTPGLEPRYARVWIDLGAVPSLASGLESHSEFDQSSTLTADIPLLMFAIATSLLASAASAGVPIKTGDKVRLSVAILTLFIDRTEWISEHASMNLASLFSTVEWLL--PAVDRIPVELRKRAVATARRCELAG---GAWK---------------SGDADAVA---------------------LALSGG-------NAKLQDSLFGKMCAGPGCGNVQQQEGAPSKTAAVATASK------GVFATVFKRCSRCHTKLYCSRECQAAHWKVGHKREC 380
            +W ++R L    P+ + + Y D    ++L  +S+ + P +   R+  ++ ++ + DG  LD+L+ L  GS+ HPAL+YA L +L  V +L      +L R DV++ LL VL  P+   I+P         +A  A   +  +  +   GL+  +A  W+ LGA+ +++S LE ++      T   D P++MF I+  LL+ A  A   +   D+ R++   L L+++R  W++ +A  +L SLF   E  L   A+ R P+ELR +AV  A      G   G W                 G  D VA                      A +GG       +  ++ S   ++ +  G  NV   +      AAV  + +      G     FKRC RC T +YCS++CQ AHWK  HK EC
Sbjct:   24 LWDQIRKLRDCAPM-EGEFYPDEEPAKALAAISVALKPWSSASRETLLSMYAKIADGKRLDDLISLFLGSQEHPALRYACLELLGFVGQLKQTHRRLLCRMDVIKTLLTVLERPRIVPISPYCPSNDICPAAEAAR--VLSVLCAAEGGLKGAHAEEWVSLGALGAISSALEFNAAIPDYFT---DFPMVMFMISGVLLSEAGHA---VSLDDRARVAETSLGLWVERRRWVAPYAG-SLGSLF---EGPLRGEALMRAPLELRNQAVKQAEDFIAEGFSLGGWAVRLVAAILSESPADGGGGGDGVAGNXXXXXXXXXXXXXXVTDSASATAGGVGPTSGVSGPVRPSGGKQVPSTRGHLNVVLSDIKRGADAAVLCSRETCGRRQGDVKEGFKRCGRCRTTVYCSKDCQVAHWKEKHKMEC 433          
BLAST of mRNA_H-paniculata_contig1824.4445.1 vs. uniprot
Match: A0A196SGB7_BLAHN (MYND-type zinc finger protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SGB7_BLAHN)

HSP 1 Score: 62.8 bits (151), Expect = 4.990e-8
Identity = 28/66 (42.42%), Postives = 35/66 (53.03%), Query Frame = 0
Query:  316 KMCAGPGCGNVQQQEGAPSKTAAVATASKGVFATVFKRCSRCHTKLYCSRECQAAHWKVGHKRECV 381
            + C+ P CGN + + G                   FK+CSRC T  YCS+ECQ  HWK GHK+ECV
Sbjct:    5 RTCSNPNCGNTESKPGE------------------FKKCSRCKTACYCSKECQLEHWKNGHKKECV 52          
BLAST of mRNA_H-paniculata_contig1824.4445.1 vs. uniprot
Match: D8LGK8_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK8_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 1.060e-6
Identity = 57/182 (31.32%), Postives = 72/182 (39.56%), Query Frame = 0
Query:  227 RLSVAILTLFIDRTEWISEHASM-----------------------NLASLFSTVEWLLPAVDRI-PVELRKRAVATARRCELAGGAWKSGDADAVALALSGGNAKLQDSLFGKMCAGPGCGNVQQQEGAPSKTAAVATASK----GVFATVFKRCSRCHTKLYCSRECQAAHWKVGHKREC 380
            RL+ A L L  +R EW++   +M                       NL         LL A  R+ PV LR +AVA AR+CE  G       A    L   GG  +L   + G          ++ +E A +     A   K          FK CSRC   +YCS ECQ AHWK  HK EC
Sbjct:  297 RLAEAFLRLLAERREWVARSLAMAANASPTDLSGGGATAAAPVTINNLLVNSLAHADLLGAFTRLTPVRLRAQAVAAARQCETDGTFAPGFGAQLARLLGLGGQQELNRRMAGHTVQ-----KIKNKEAARAANIKCAMCGKRQGNASGGAKFKVCSRCQVAMYCSGECQKAHWKT-HKMEC 472          
BLAST of mRNA_H-paniculata_contig1824.4445.1 vs. uniprot
Match: D8M496_BLAHO (MYND-type domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M496_BLAHO)

HSP 1 Score: 57.0 bits (136), Expect = 4.940e-6
Identity = 25/65 (38.46%), Postives = 35/65 (53.85%), Query Frame = 0
Query:  316 KMCAGPGCGNVQQQEGAPSKTAAVATASKGVFATVFKRCSRCHTKLYCSRECQAAHWKVGHKREC 380
            + C+ P CGN + + G                   FK+CSRC +  YCS++CQ+AHWK GH+ EC
Sbjct:    5 RSCSNPLCGNTESRPGE------------------FKKCSRCKSACYCSKKCQSAHWKNGHREEC 51          
BLAST of mRNA_H-paniculata_contig1824.4445.1 vs. uniprot
Match: A0A443HZP6_BYSSP (MYND-type zinc finger protein samB n=1 Tax=Byssochlamys spectabilis TaxID=264951 RepID=A0A443HZP6_BYSSP)

HSP 1 Score: 57.0 bits (136), Expect = 8.210e-6
Identity = 20/30 (66.67%), Postives = 23/30 (76.67%), Query Frame = 0
Query:  352 KRCSRCHTKLYCSRECQAAHWKVGHKRECV 381
            KRC+RCH  +YCSRECQ AHWK  HK  C+
Sbjct:   42 KRCARCHITIYCSRECQKAHWKADHKNRCI 71          
BLAST of mRNA_H-paniculata_contig1824.4445.1 vs. uniprot
Match: E1ZA90_CHLVA (MYND-type domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZA90_CHLVA)

HSP 1 Score: 57.4 bits (137), Expect = 1.410e-5
Identity = 27/50 (54.00%), Postives = 30/50 (60.00%), Query Frame = 0
Query:  332 APSKTAAVATASKGVFATVFKRCSRCHTKLYCSRECQAAHWKVGHKRECV 381
            AP+  AA  T   G  A   K+CSRC    YC RECQ AHW+ GHKREC 
Sbjct:  251 APNAKAACGTC--GQHAAELKKCSRCRAVAYCCRECQMAHWRRGHKRECA 298          
BLAST of mRNA_H-paniculata_contig1824.4445.1 vs. uniprot
Match: A0A835XUH3_9CHLO (MYND-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XUH3_9CHLO)

HSP 1 Score: 54.7 bits (130), Expect = 1.810e-5
Identity = 21/29 (72.41%), Postives = 22/29 (75.86%), Query Frame = 0
Query:  352 KRCSRCHTKLYCSRECQAAHWKVGHKREC 380
            KRC  C    YC RECQAAHW+VGHKREC
Sbjct:  111 KRCGGCEAARYCCRECQAAHWEVGHKREC 139          
BLAST of mRNA_H-paniculata_contig1824.4445.1 vs. uniprot
Match: A0A166FNB7_9AGAM (MYND-type domain-containing protein n=2 Tax=Sistotremastrum TaxID=139133 RepID=A0A166FNB7_9AGAM)

HSP 1 Score: 57.8 bits (138), Expect = 2.130e-5
Identity = 21/37 (56.76%), Postives = 27/37 (72.97%), Query Frame = 0
Query:  347 FATVFKRCSRCHTKLYCSRECQAAHWKVGHKRECVSP 383
            ++   K+CSRC    YC +ECQAAHWK GHK +C+SP
Sbjct:  580 YSVGLKKCSRCGKVKYCGKECQAAHWKAGHKAKCISP 616          
BLAST of mRNA_H-paniculata_contig1824.4445.1 vs. uniprot
Match: A0A165ZXJ2_9AGAM (MYND-type domain-containing protein n=1 Tax=Sistotremastrum suecicum HHB10207 ss-3 TaxID=1314776 RepID=A0A165ZXJ2_9AGAM)

HSP 1 Score: 54.3 bits (129), Expect = 2.270e-5
Identity = 19/32 (59.38%), Postives = 25/32 (78.12%), Query Frame = 0
Query:  352 KRCSRCHTKLYCSRECQAAHWKVGHKRECVSP 383
            K+C+ C    YC++ECQ+ HWK+ HKRECVSP
Sbjct:  109 KKCANCGEAKYCNKECQSRHWKLSHKRECVSP 140          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1824.4445.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5JNJ8_9PHAE4.960e-9445.50MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5KPW0_9PHAE9.640e-3128.61MYND-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A196SGB7_BLAHN4.990e-842.42MYND-type zinc finger protein n=1 Tax=Blastocystis... [more]
D8LGK8_ECTSI1.060e-631.32MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
D8M496_BLAHO4.940e-638.46MYND-type domain-containing protein n=1 Tax=Blasto... [more]
A0A443HZP6_BYSSP8.210e-666.67MYND-type zinc finger protein samB n=1 Tax=Byssoch... [more]
E1ZA90_CHLVA1.410e-554.00MYND-type domain-containing protein n=1 Tax=Chlore... [more]
A0A835XUH3_9CHLO1.810e-572.41MYND-type domain-containing protein n=1 Tax=Edapho... [more]
A0A166FNB7_9AGAM2.130e-556.76MYND-type domain-containing protein n=2 Tax=Sistot... [more]
A0A165ZXJ2_9AGAM2.270e-559.38MYND-type domain-containing protein n=1 Tax=Sistot... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.60.180coord: 316..382
e-value: 1.6E-10
score: 42.7
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 219..385
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 156..197
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 136..155
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 198..218
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..135
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 351..381
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 349..380
e-value: 6.6E-10
score: 38.9
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 320..380
score: 10.782

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1824contigH-paniculata_contig1824:14622..15779 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1824.4445.1mRNA_H-paniculata_contig1824.4445.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1824 14115..16118 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1824.4445.1 ID=prot_H-paniculata_contig1824.4445.1|Name=mRNA_H-paniculata_contig1824.4445.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=386bp
MRMTSPDVRTKVWKELRVLGKSPPLNDQDLYEDHVAYESLRQVSITVAPL
AELPRQHFITFFSMLVDGPLLDELVDLLKGSRRHPALQYATLLVLHGVVE
LVDKRLVILSRQDVVEELLHVLASPQRRRITPPTSFPYFVNSAGGAMSTI
TGLFTSNTPGLEPRYARVWIDLGAVPSLASGLESHSEFDQSSTLTADIPL
LMFAIATSLLASAASAGVPIKTGDKVRLSVAILTLFIDRTEWISEHASMN
LASLFSTVEWLLPAVDRIPVELRKRAVATARRCELAGGAWKSGDADAVAL
ALSGGNAKLQDSLFGKMCAGPGCGNVQQQEGAPSKTAAVATASKGVFATV
FKRCSRCHTKLYCSRECQAAHWKVGHKRECVSPST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND