prot_H-paniculata_contig18233.4442.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18233.4442.1
Unique Nameprot_H-paniculata_contig18233.4442.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length146
Homology
BLAST of mRNA_H-paniculata_contig18233.4442.1 vs. uniprot
Match: D8LM73_ECTSI (MCM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM73_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 5.190e-21
Identity = 50/57 (87.72%), Postives = 52/57 (91.23%), Query Frame = 0
Query:   89 VVTVKANAHIRIIRLPPLSDLCKSNISSIRGTDLGSLIQIQGTVIRSGAAKMLEVSR 145
            V+TVK NAHIRI  LPPLSDLCK NIS+IRGTDLG LIQIQGTVIRSGAAKMLEVSR
Sbjct:   94 VLTVKGNAHIRITHLPPLSDLCKPNISAIRGTDLGVLIQIQGTVIRSGAAKMLEVSR 150          
BLAST of mRNA_H-paniculata_contig18233.4442.1 vs. uniprot
Match: A0A835Z090_9STRA (MCM2/3/5 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z090_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.870e-9
Identity = 37/81 (45.68%), Postives = 46/81 (56.79%), Query Frame = 0
Query:   90 VTVKANAHIRIIRLPPLSDLCKSNISSIRGTDLGSLIQ-------------------------IQGTVIRSGAAKMLEVSR 145
            ++VK NAH+R+  LP +SDLCK N+SSIR TDL  +IQ                         IQGTVIR+G  KMLEV+R
Sbjct:  176 LSVKRNAHVRLAHLPSVSDLCKPNVSSIRNTDLNRVIQVQPILYMSTPADVIVCHKMRLLIYRIQGTVIRTGMVKMLEVTR 256          
BLAST of mRNA_H-paniculata_contig18233.4442.1 vs. uniprot
Match: A0A7S2WCY2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCY2_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 4.040e-8
Identity = 28/56 (50.00%), Postives = 38/56 (67.86%), Query Frame = 0
Query:   90 VTVKANAHIRIIRLPPLSDLCKSNISSIRGTDLGSLIQIQGTVIRSGAAKMLEVSR 145
            ++VK N  +R   LP + + CK N+SSIR +D+G L+QI GTVIR+   KMLE  R
Sbjct:  138 LSVKQNVTVRFTHLPAIPEFCKPNVSSIRASDVGGLVQICGTVIRTSTVKMLEYMR 193          
BLAST of mRNA_H-paniculata_contig18233.4442.1 vs. uniprot
Match: R1ESQ6_EMIHU (MCM_OB domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ESQ6_EMIHU)

HSP 1 Score: 60.1 bits (144), Expect = 6.630e-8
Identity = 29/61 (47.54%), Postives = 42/61 (68.85%), Query Frame = 0
Query:   85 EKQYVVTVKANAHIRIIRLPPLSDLCKSNISSIRGTDLGSLIQIQGTVIRSGAAKMLEVSR 145
            E  + ++VK + H R+ RLP  ++L K N+SS+R  D   LIQ+ GTVIR+G  KML++SR
Sbjct:   97 EDGHFMSVKPSVHARLYRLPHCTELRKLNVSSLRADDSNCLIQVPGTVIRTGQLKMLQLSR 157          
BLAST of mRNA_H-paniculata_contig18233.4442.1 vs. uniprot
Match: A0A7S3JRI9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRI9_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 7.530e-8
Identity = 31/71 (43.66%), Postives = 46/71 (64.79%), Query Frame = 0
Query:   83 EREKQYVVTVKAN--------AHIRIIRLPPLSDLCKSNISSIRGTDLGSLIQIQGTVIRSGAAKMLEVSR 145
            E ++QY+ +   N        AH R+  LPPLS   K N+S+IR  D+G L+QI G+++RSG+ +MLEV+R
Sbjct:  221 EAQEQYLRSGVCNDSWIPIVRAHARLYHLPPLSLFEKKNVSAIRSKDVGHLVQITGSIVRSGSTRMLEVAR 291          
BLAST of mRNA_H-paniculata_contig18233.4442.1 vs. uniprot
Match: R1DH10_EMIHU (MCM domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DH10_EMIHU)

HSP 1 Score: 60.1 bits (144), Expect = 9.830e-8
Identity = 29/61 (47.54%), Postives = 42/61 (68.85%), Query Frame = 0
Query:   85 EKQYVVTVKANAHIRIIRLPPLSDLCKSNISSIRGTDLGSLIQIQGTVIRSGAAKMLEVSR 145
            E  + ++VK + H R+ RLP  ++L K N+SS+R  D   LIQ+ GTVIR+G  KML++SR
Sbjct:   97 EDGHFMSVKPSVHARLYRLPHCTELRKLNVSSLRADDSNCLIQVPGTVIRTGQLKMLQLSR 157          
BLAST of mRNA_H-paniculata_contig18233.4442.1 vs. uniprot
Match: A0A5A8DW00_CAFRO (MCM domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DW00_CAFRO)

HSP 1 Score: 59.3 bits (142), Expect = 1.860e-7
Identity = 26/56 (46.43%), Postives = 39/56 (69.64%), Query Frame = 0
Query:   90 VTVKANAHIRIIRLPPLSDLCKSNISSIRGTDLGSLIQIQGTVIRSGAAKMLEVSR 145
            ++ K + H R+  LP + +  K N+SSIR TD+GS +Q+ GTVIR+GA ++LE  R
Sbjct:  120 LSFKPHVHARLSHLPGVPEYSKPNVSSIRATDIGSFVQVPGTVIRTGATRVLEAER 175          
BLAST of mRNA_H-paniculata_contig18233.4442.1 vs. uniprot
Match: A0A5A8CLM3_CAFRO (MCM domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CLM3_CAFRO)

HSP 1 Score: 59.3 bits (142), Expect = 1.910e-7
Identity = 26/56 (46.43%), Postives = 39/56 (69.64%), Query Frame = 0
Query:   90 VTVKANAHIRIIRLPPLSDLCKSNISSIRGTDLGSLIQIQGTVIRSGAAKMLEVSR 145
            ++ K + H R+  LP + +  K N+SSIR TD+GS +Q+ GTVIR+GA ++LE  R
Sbjct:  128 LSFKPHVHARLSHLPGVPEYSKPNVSSIRATDIGSFVQVPGTVIRTGATRVLEAER 183          
BLAST of mRNA_H-paniculata_contig18233.4442.1 vs. uniprot
Match: A0A812ZUJ1_9DINO (Mcm9 protein n=2 Tax=Sar TaxID=2698737 RepID=A0A812ZUJ1_9DINO)

HSP 1 Score: 59.3 bits (142), Expect = 1.940e-7
Identity = 26/56 (46.43%), Postives = 39/56 (69.64%), Query Frame = 0
Query:   90 VTVKANAHIRIIRLPPLSDLCKSNISSIRGTDLGSLIQIQGTVIRSGAAKMLEVSR 145
            ++ K + H R+  LP + +  K N+SSIR TD+GS +Q+ GTVIR+GA ++LE  R
Sbjct:   35 LSFKPHVHARLSHLPGVPEYSKPNVSSIRATDIGSFVQVPGTVIRTGATRVLEAER 90          
BLAST of mRNA_H-paniculata_contig18233.4442.1 vs. uniprot
Match: M4BLH4_HYAAE (MCM domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BLH4_HYAAE)

HSP 1 Score: 54.7 bits (130), Expect = 7.630e-6
Identity = 29/65 (44.62%), Postives = 42/65 (64.62%), Query Frame = 0
Query:   83 EREKQYVVTVKANAH--IRIIRLPPLSDLCKSNISSIRGTDLGSLIQIQGTVIRSGAAKMLEVSR 145
            ER +  V+ +K      +R+  LPP++ L KS+IS+IR  D+  L+QI GTV+R+G  KM EV R
Sbjct:  126 ERGELPVIPLKVRRRLKVRVEHLPPVAPLQKSSISAIRSNDVKQLVQIAGTVVRTGVMKMQEVER 190          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18233.4442.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LM73_ECTSI5.190e-2187.72MCM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835Z090_9STRA1.870e-945.68MCM2/3/5 family-domain-containing protein n=1 Tax=... [more]
A0A7S2WCY2_9STRA4.040e-850.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
R1ESQ6_EMIHU6.630e-847.54MCM_OB domain-containing protein n=1 Tax=Emiliania... [more]
A0A7S3JRI9_9STRA7.530e-843.66Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
R1DH10_EMIHU9.830e-847.54MCM domain-containing protein n=1 Tax=Emiliania hu... [more]
A0A5A8DW00_CAFRO1.860e-746.43MCM domain-containing protein n=1 Tax=Cafeteria ro... [more]
A0A5A8CLM3_CAFRO1.910e-746.43MCM domain-containing protein n=2 Tax=Cafeteria ro... [more]
A0A812ZUJ1_9DINO1.940e-746.43Mcm9 protein n=2 Tax=Sar TaxID=2698737 RepID=A0A81... [more]
M4BLH4_HYAAE7.630e-644.62MCM domain-containing protein n=1 Tax=Hyaloperonos... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18233contigH-paniculata_contig18233:4131..4930 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18233.4442.1mRNA_H-paniculata_contig18233.4442.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18233 2821..5033 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18233.4442.1 ID=prot_H-paniculata_contig18233.4442.1|Name=mRNA_H-paniculata_contig18233.4442.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=146bp
MRQRKYIRNMYALICLPSSRTLRGRFTRASQLMREALDLVQSRIVAQAEE
IRASRSRSGSSGSSGGGRSSAANGGDIPNGGEEREKQYVVTVKANAHIRI
IRLPPLSDLCKSNISSIRGTDLGSLIQIQGTVIRSGAAKMLEVSR*
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