prot_H-paniculata_contig1823.4441.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1823.4441.1
Unique Nameprot_H-paniculata_contig1823.4441.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length451
Homology
BLAST of mRNA_H-paniculata_contig1823.4441.1 vs. uniprot
Match: D8LUD2_ECTSI (DRMBL domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUD2_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 2.800e-25
Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = 0
Query:    5 ARVHSLPYSEHSSYPQLKEFVRTVRPKKIVPTVNASSGPAVEKLLKHFLEFMDLSSDRKRLDSYFCKSSTATPSSTASR 83
            ARV+SLPYSEHSS+ QLK+FVRTVRPKKIVPTVNA S  +VEK+L HFLEFMDLSSDRKRL+SYFCK     PS+TASR
Sbjct:  375 ARVYSLPYSEHSSFTQLKDFVRTVRPKKIVPTVNAVSSASVEKMLSHFLEFMDLSSDRKRLESYFCKRDP--PSATASR 451          
BLAST of mRNA_H-paniculata_contig1823.4441.1 vs. uniprot
Match: A0A7S0PPJ7_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0PPJ7_MICPS)

HSP 1 Score: 83.2 bits (204), Expect = 4.810e-15
Identity = 35/64 (54.69%), Postives = 52/64 (81.25%), Query Frame = 0
Query:    6 RVHSLPYSEHSSYPQLKEFVRTVRPKKIVPTVNASSGPAVEKLLKHFLEFMDLSSDRKRLDSYF 69
            RV+S+PYSEHSS+ +L EFV+ +RP+++ PTVNA +    ++++KHFLEF DL++D+ RLD YF
Sbjct:   54 RVYSVPYSEHSSFVELVEFVKRIRPRRVTPTVNADTKADKDRIMKHFLEFTDLAADKNRLDHYF 117          
BLAST of mRNA_H-paniculata_contig1823.4441.1 vs. uniprot
Match: K8YRT5_NANGC (Hydrolase involved in interstrand cross-link repair n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YRT5_NANGC)

HSP 1 Score: 82.0 bits (201), Expect = 3.240e-14
Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 0
Query:    5 ARVHSLPYSEHSSYPQLKEFVRTVRPKKIVPTVNASSGPAVEKLLKHFLEFMDLSSDRKRLDSY 68
            A+++ +PYSEHSSY +L+ FVR +RP+KI+PTV A     VE+ LKHFL  MDLS DR RLD Y
Sbjct:   67 AKLYWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHFLADMDLSHDRSRLDRY 130          
BLAST of mRNA_H-paniculata_contig1823.4441.1 vs. uniprot
Match: W7THR8_9STRA (Dna cross-link repair 1a protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7THR8_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.700e-13
Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 0
Query:    5 ARVHSLPYSEHSSYPQLKEFVRTVRPKKIVPTVNASSGPAVEKLLKHFLEFMDLSSDRKRLDSY 68
            A+++ +PYSEHSSY +L+ FVR +RP+KI+PTV A     VE+ LKHFL  MDLS DR RLD Y
Sbjct:  236 AKLYWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHFLADMDLSHDRSRLDRY 299          
BLAST of mRNA_H-paniculata_contig1823.4441.1 vs. uniprot
Match: A0A4D9CSH8_9STRA (DRMBL domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSH8_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 8.890e-13
Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 0
Query:    5 ARVHSLPYSEHSSYPQLKEFVRTVRPKKIVPTVNASSGPAVEKLLKHFLEFMDLSSDRKRLDSYFCKSSTATP 77
            A+++ +PYSEHSSY +L+ FVR +RP+KI+PTV A     VE+ LKHFL  MDLS D+ RLD Y  +     P
Sbjct:  395 AKLYWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHFLADMDLSHDKSRLDRYLGRGEEKRP 467          
BLAST of mRNA_H-paniculata_contig1823.4441.1 vs. uniprot
Match: A0A7S0Z9D4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0Z9D4_9CHLO)

HSP 1 Score: 80.1 bits (196), Expect = 1.020e-12
Identity = 40/76 (52.63%), Postives = 54/76 (71.05%), Query Frame = 0
Query:    6 RVHSLPYSEHSSYPQLKEFVRTVRPKKIVPTVNASSGPAVEKLL-KHFLEFMDLSSDRKRLDSYFCKSSTATPSST 80
            R +S+PYSEHSSY +L+EFV+  +PKKI PTVNA++    +KL+ KHFL+ +DL  D  +LD YF    +A PS T
Sbjct:  102 RTYSVPYSEHSSYTELREFVKFFKPKKITPTVNAATRKERDKLVNKHFLDLVDLKQDSSKLDYYFKNKVSAAPSKT 177          
BLAST of mRNA_H-paniculata_contig1823.4441.1 vs. uniprot
Match: A0A8J9WR85_9CHLO (Probable DNA cross-link repair 1A protein at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WR85_9CHLO)

HSP 1 Score: 80.9 bits (198), Expect = 1.620e-12
Identity = 37/76 (48.68%), Postives = 56/76 (73.68%), Query Frame = 0
Query:    7 VHSLPYSEHSSYPQLKEFVRTVRPKKIVPTVNASSGPAVEKLLKHFLEFMDLSSDRKRLDSYFCKSSTATPSSTAS 82
            ++ +PYSEHSS+ +L++ V+T+RP++IVPTVNAS+  A   L+  F + MDLS DR RLD +  K+ TA P++ +S
Sbjct:  293 IYGIPYSEHSSFAELRDCVKTLRPRRIVPTVNASTPAAARSLVDRFADLMDLSKDRSRLDFFLRKAKTAPPATASS 368          
BLAST of mRNA_H-paniculata_contig1823.4441.1 vs. uniprot
Match: A0A7S2WPP5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPP5_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 7.070e-12
Identity = 32/67 (47.76%), Postives = 49/67 (73.13%), Query Frame = 0
Query:    2 GKNARVHSLPYSEHSSYPQLKEFVRTVRPKKIVPTVNASSGPAVEKLLKHFLEFMDLSSDRKRLDSY 68
            G+  R++ +PYSEHSS+PQL +FV  VRP +I PTVNA+     ++L++HFL  +DL +D +R++ Y
Sbjct:   72 GEATRLYMVPYSEHSSFPQLLQFVGRVRPLRITPTVNATDAAERDRLVRHFLHLLDLRADPRRMEYY 138          
BLAST of mRNA_H-paniculata_contig1823.4441.1 vs. uniprot
Match: Q00YR2_OSTTA (DNA repair metallo-beta-lactamase n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q00YR2_OSTTA)

HSP 1 Score: 76.6 bits (187), Expect = 2.980e-11
Identity = 36/65 (55.38%), Postives = 51/65 (78.46%), Query Frame = 0
Query:    6 RVHSLPYSEHSSYPQLKEFVRTVRPKKIVPTVNASSGPAVEKLL-KHFLEFMDLSSDRKRLDSYF 69
            R +++PYSEHSSY +L+EF++ ++PK+I PTVNAS+    EKL+ KHFL+ +DL  D KR+D YF
Sbjct:  337 RTYAVPYSEHSSYTELREFIKFLKPKRITPTVNASTENEREKLVNKHFLDLVDLKYDVKRIDFYF 401          
BLAST of mRNA_H-paniculata_contig1823.4441.1 vs. uniprot
Match: A0A7R9T7F0_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A0A7R9T7F0_9CHLO)

HSP 1 Score: 76.3 bits (186), Expect = 3.700e-11
Identity = 37/71 (52.11%), Postives = 53/71 (74.65%), Query Frame = 0
Query:    6 RVHSLPYSEHSSYPQLKEFVRTVRPKKIVPTVNASSGPAVEKLL-KHFLEFMDLSSDRKRLDSYFCKSSTA 75
            R +++PYSEHSSY +L+EF++ ++PKKI PTVNA +    EKL+ KHFL+ +DL  D  RLD YF  S+++
Sbjct:  339 RTYAIPYSEHSSYTELREFIKFLKPKKITPTVNAITPKDREKLVNKHFLDLVDLKQDVNRLDYYFKNSASS 409          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1823.4441.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LUD2_ECTSI2.800e-2578.48DRMBL domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A7S0PPJ7_MICPS4.810e-1554.69Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
K8YRT5_NANGC3.240e-1459.38Hydrolase involved in interstrand cross-link repai... [more]
W7THR8_9STRA2.700e-1359.38Dna cross-link repair 1a protein n=1 Tax=Nannochlo... [more]
A0A4D9CSH8_9STRA8.890e-1352.05DRMBL domain-containing protein n=1 Tax=Nannochlor... [more]
A0A7S0Z9D4_9CHLO1.020e-1252.63Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]
A0A8J9WR85_9CHLO1.620e-1248.68Probable DNA cross-link repair 1A protein at N-ter... [more]
A0A7S2WPP5_9STRA7.070e-1247.76Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
Q00YR2_OSTTA2.980e-1155.38DNA repair metallo-beta-lactamase n=2 Tax=Ostreoco... [more]
A0A7R9T7F0_9CHLO3.700e-1152.11Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011084DNA repair metallo-beta-lactamasePFAMPF07522DRMBLcoord: 4..40
e-value: 1.6E-10
score: 41.2
NoneNo IPR availablePANTHERPTHR23240DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATEDcoord: 5..96
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeSUPERFAMILY56281Metallo-hydrolase/oxidoreductasecoord: 3..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1823contigH-paniculata_contig1823:20936..23955 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1823.4441.1mRNA_H-paniculata_contig1823.4441.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1823 20636..24063 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1823.4441.1 ID=prot_H-paniculata_contig1823.4441.1|Name=mRNA_H-paniculata_contig1823.4441.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=451bp
MGKNARVHSLPYSEHSSYPQLKEFVRTVRPKKIVPTVNASSGPAVEKLLK
HFLEFMDLSSDRKRLDSYFCKSSTATPSSTASRSNIATPSAREVPLSVST
PVTKRIRKGARGDAGGKATAEADLFEAHNEAKLGAAAREAAATVVEEIST
RRRVQQQEKDDDKGAIVLLPPPRLRCVGAAAAPTALARAATAAAAAAVPT
VDNVDIVDMTSCSSAVTVAATTAIVNDVTAERETYISSSSMVEGLAASSI
DVEAQKAILADIERRNRLQSFQPPLLPPPQEERSKPNKTSATTTMPTVLN
PYATPPVRGGKGGSRGRDRGARKTSSGASAAGWAAKSTCDDENRRPMSSR
GKGRRGAKGRGVAKSARAAAYETGRGVEGDRPLGKGGMANKGSAAVLSGN
SVRQKRAGAVPGAAAAGAAVGAKRGGVMDGKRNSHPASPVATIRDFFGRI
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011084DRMBL
IPR036866RibonucZ/Hydroxyglut_hydro