mRNA_H-paniculata_contig1823.4441.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1823.4441.1
Unique NamemRNA_H-paniculata_contig1823.4441.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig1823.4441.1 vs. uniprot
Match: D8LUD2_ECTSI (DRMBL domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUD2_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 2.190e-26
Identity = 82/150 (54.67%), Postives = 93/150 (62.00%), Query Frame = 1 
Query:  148 DDLDDEAAAWGAGNFGEPAEGKPAGEEGQLEAVGGEGSLTEKD----------------WKGEKPRHMGKNARVHSLPYSEHSSYPQLKEFVRTVRPKKIVPTVNASSGPAVEKLLKHFLEFMDLSSDRKRLDSYFCKSSTATPSSTASR 549
            +D DDEAAAWGAG        +   EE       G G +                    W G+KP   G  ARV+SLPYSEHSS+ QLK+FVRTVRPKKIVPTVNA S  +VEK+L HFLEFMDLSSDRKRL+SYFCK     PS+TASR
Sbjct:  311 EDQDDEAAAWGAGLE------EDGNEETMQVTANGVGVVPXXXXXXXXXXTVAGPAVGPWTGKKPWVDGV-ARVYSLPYSEHSSFTQLKDFVRTVRPKKIVPTVNAVSSASVEKMLSHFLEFMDLSSDRKRLESYFCKRDP--PSATASR 451
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BLAST of mRNA_H-paniculata_contig1823.4441.1 vs. uniprot
Match: A0A7S0PPJ7_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0PPJ7_MICPS)

HSP 1 Score: 82.8 bits (203), Expect = 1.010e-14
Identity = 35/64 (54.69%), Postives = 52/64 (81.25%), Query Frame = 1 
Query:  316 RVHSLPYSEHSSYPQLKEFVRTVRPKKIVPTVNASSGPAVEKLLKHFLEFMDLSSDRKRLDSYF 507
            RV+S+PYSEHSS+ +L EFV+ +RP+++ PTVNA +    ++++KHFLEF DL++D+ RLD YF
Sbjct:   54 RVYSVPYSEHSSFVELVEFVKRIRPRRVTPTVNADTKADKDRIMKHFLEFTDLAADKNRLDHYF 117
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BLAST of mRNA_H-paniculata_contig1823.4441.1 vs. uniprot
Match: K8YRT5_NANGC (Hydrolase involved in interstrand cross-link repair n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YRT5_NANGC)

HSP 1 Score: 81.6 bits (200), Expect = 6.870e-14
Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 1 
Query:  313 ARVHSLPYSEHSSYPQLKEFVRTVRPKKIVPTVNASSGPAVEKLLKHFLEFMDLSSDRKRLDSY 504
            A+++ +PYSEHSSY +L+ FVR +RP+KI+PTV A     VE+ LKHFL  MDLS DR RLD Y
Sbjct:   67 AKLYWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHFLADMDLSHDRSRLDRY 130
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BLAST of mRNA_H-paniculata_contig1823.4441.1 vs. uniprot
Match: W7THR8_9STRA (Dna cross-link repair 1a protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7THR8_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 6.440e-13
Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 1 
Query:  313 ARVHSLPYSEHSSYPQLKEFVRTVRPKKIVPTVNASSGPAVEKLLKHFLEFMDLSSDRKRLDSY 504
            A+++ +PYSEHSSY +L+ FVR +RP+KI+PTV A     VE+ LKHFL  MDLS DR RLD Y
Sbjct:  236 AKLYWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHFLADMDLSHDRSRLDRY 299
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BLAST of mRNA_H-paniculata_contig1823.4441.1 vs. uniprot
Match: A0A4D9CSH8_9STRA (DRMBL domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSH8_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 2.330e-12
Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 1 
Query:  313 ARVHSLPYSEHSSYPQLKEFVRTVRPKKIVPTVNASSGPAVEKLLKHFLEFMDLSSDRKRLDSYFCKSSTATP 531
            A+++ +PYSEHSSY +L+ FVR +RP+KI+PTV A     VE+ LKHFL  MDLS D+ RLD Y  +     P
Sbjct:  395 AKLYWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHFLADMDLSHDKSRLDRYLGRGEEKRP 467
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BLAST of mRNA_H-paniculata_contig1823.4441.1 vs. uniprot
Match: A0A7S0Z9D4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0Z9D4_9CHLO)

HSP 1 Score: 79.7 bits (195), Expect = 2.360e-12
Identity = 40/76 (52.63%), Postives = 54/76 (71.05%), Query Frame = 1 
Query:  316 RVHSLPYSEHSSYPQLKEFVRTVRPKKIVPTVNASSGPAVEKLL-KHFLEFMDLSSDRKRLDSYFCKSSTATPSST 540
            R +S+PYSEHSSY +L+EFV+  +PKKI PTVNA++    +KL+ KHFL+ +DL  D  +LD YF    +A PS T
Sbjct:  102 RTYSVPYSEHSSYTELREFVKFFKPKKITPTVNAATRKERDKLVNKHFLDLVDLKQDSSKLDYYFKNKVSAAPSKT 177
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BLAST of mRNA_H-paniculata_contig1823.4441.1 vs. uniprot
Match: A0A8J9WR85_9CHLO (Probable DNA cross-link repair 1A protein at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WR85_9CHLO)

HSP 1 Score: 80.5 bits (197), Expect = 4.480e-12
Identity = 37/76 (48.68%), Postives = 56/76 (73.68%), Query Frame = 1 
Query:  319 VHSLPYSEHSSYPQLKEFVRTVRPKKIVPTVNASSGPAVEKLLKHFLEFMDLSSDRKRLDSYFCKSSTATPSSTAS 546
            ++ +PYSEHSS+ +L++ V+T+RP++IVPTVNAS+  A   L+  F + MDLS DR RLD +  K+ TA P++ +S
Sbjct:  293 IYGIPYSEHSSFAELRDCVKTLRPRRIVPTVNASTPAAARSLVDRFADLMDLSKDRSRLDFFLRKAKTAPPATASS 368
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BLAST of mRNA_H-paniculata_contig1823.4441.1 vs. uniprot
Match: A0A7S2WPP5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPP5_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.850e-11
Identity = 32/67 (47.76%), Postives = 49/67 (73.13%), Query Frame = 1 
Query:  304 GKNARVHSLPYSEHSSYPQLKEFVRTVRPKKIVPTVNASSGPAVEKLLKHFLEFMDLSSDRKRLDSY 504
            G+  R++ +PYSEHSS+PQL +FV  VRP +I PTVNA+     ++L++HFL  +DL +D +R++ Y
Sbjct:   72 GEATRLYMVPYSEHSSFPQLLQFVGRVRPLRITPTVNATDAAERDRLVRHFLHLLDLRADPRRMEYY 138
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BLAST of mRNA_H-paniculata_contig1823.4441.1 vs. uniprot
Match: Q00YR2_OSTTA (DNA repair metallo-beta-lactamase n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q00YR2_OSTTA)

HSP 1 Score: 76.3 bits (186), Expect = 7.510e-11
Identity = 36/65 (55.38%), Postives = 51/65 (78.46%), Query Frame = 1 
Query:  316 RVHSLPYSEHSSYPQLKEFVRTVRPKKIVPTVNASSGPAVEKLL-KHFLEFMDLSSDRKRLDSYF 507
            R +++PYSEHSSY +L+EF++ ++PK+I PTVNAS+    EKL+ KHFL+ +DL  D KR+D YF
Sbjct:  337 RTYAVPYSEHSSYTELREFIKFLKPKRITPTVNASTENEREKLVNKHFLDLVDLKYDVKRIDFYF 401
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BLAST of mRNA_H-paniculata_contig1823.4441.1 vs. uniprot
Match: A0A7R9T7F0_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A0A7R9T7F0_9CHLO)

HSP 1 Score: 75.9 bits (185), Expect = 9.180e-11
Identity = 37/71 (52.11%), Postives = 53/71 (74.65%), Query Frame = 1 
Query:  316 RVHSLPYSEHSSYPQLKEFVRTVRPKKIVPTVNASSGPAVEKLL-KHFLEFMDLSSDRKRLDSYFCKSSTA 525
            R +++PYSEHSSY +L+EF++ ++PKKI PTVNA +    EKL+ KHFL+ +DL  D  RLD YF  S+++
Sbjct:  339 RTYAIPYSEHSSYTELREFIKFLKPKKITPTVNAITPKDREKLVNKHFLDLVDLKQDVNRLDYYFKNSASS 409
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1823.4441.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LUD2_ECTSI2.190e-2654.67DRMBL domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A7S0PPJ7_MICPS1.010e-1454.69Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
K8YRT5_NANGC6.870e-1459.38Hydrolase involved in interstrand cross-link repai... [more]
W7THR8_9STRA6.440e-1359.38Dna cross-link repair 1a protein n=1 Tax=Nannochlo... [more]
A0A4D9CSH8_9STRA2.330e-1252.05DRMBL domain-containing protein n=1 Tax=Nannochlor... [more]
A0A7S0Z9D4_9CHLO2.360e-1252.63Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]
A0A8J9WR85_9CHLO4.480e-1248.68Probable DNA cross-link repair 1A protein at N-ter... [more]
A0A7S2WPP5_9STRA1.850e-1147.76Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
Q00YR2_OSTTA7.510e-1155.38DNA repair metallo-beta-lactamase n=2 Tax=Ostreoco... [more]
A0A7R9T7F0_9CHLO9.180e-1152.11Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1823contigH-paniculata_contig1823:20636..24063 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score121.3
Seed ortholog evalue1.1e-24
Seed eggNOG ortholog2880.D8LUD2
KEGG koko:K15340
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protection from non-homologous end joining at telomere
EggNOG OGsCOG1236@1,KOG1361@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03400
Exons2
Model size1761
Cds size1353
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1823.4441.1prot_H-paniculata_contig1823.4441.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1823 20936..23955 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929416.8137124-UTR-H-paniculata_contig1823:20635..209351622929416.8137124-UTR-H-paniculata_contig1823:20635..20935Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1823 20636..20935 +
1691480852.2427192-UTR-H-paniculata_contig1823:20635..209351691480852.2427192-UTR-H-paniculata_contig1823:20635..20935Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1823 20636..20935 +
1622929416.8692875-UTR-H-paniculata_contig1823:23955..240631622929416.8692875-UTR-H-paniculata_contig1823:23955..24063Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1823 23956..24063 +
1691480852.2768786-UTR-H-paniculata_contig1823:23955..240631691480852.2768786-UTR-H-paniculata_contig1823:23955..24063Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1823 23956..24063 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929416.8295314-CDS-H-paniculata_contig1823:20935..210271622929416.8295314-CDS-H-paniculata_contig1823:20935..21027Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1823 20936..21027 +
1691480852.253396-CDS-H-paniculata_contig1823:20935..210271691480852.253396-CDS-H-paniculata_contig1823:20935..21027Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1823 20936..21027 +
1622929416.849776-CDS-H-paniculata_contig1823:22694..239551622929416.849776-CDS-H-paniculata_contig1823:22694..23955Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1823 22695..23955 +
1691480852.267404-CDS-H-paniculata_contig1823:22694..239551691480852.267404-CDS-H-paniculata_contig1823:22694..23955Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1823 22695..23955 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1823.4441.1

>prot_H-paniculata_contig1823.4441.1 ID=prot_H-paniculata_contig1823.4441.1|Name=mRNA_H-paniculata_contig1823.4441.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=451bp
MGKNARVHSLPYSEHSSYPQLKEFVRTVRPKKIVPTVNASSGPAVEKLLK
HFLEFMDLSSDRKRLDSYFCKSSTATPSSTASRSNIATPSAREVPLSVST
PVTKRIRKGARGDAGGKATAEADLFEAHNEAKLGAAAREAAATVVEEIST
RRRVQQQEKDDDKGAIVLLPPPRLRCVGAAAAPTALARAATAAAAAAVPT
VDNVDIVDMTSCSSAVTVAATTAIVNDVTAERETYISSSSMVEGLAASSI
DVEAQKAILADIERRNRLQSFQPPLLPPPQEERSKPNKTSATTTMPTVLN
PYATPPVRGGKGGSRGRDRGARKTSSGASAAGWAAKSTCDDENRRPMSSR
GKGRRGAKGRGVAKSARAAAYETGRGVEGDRPLGKGGMANKGSAAVLSGN
SVRQKRAGAVPGAAAAGAAVGAKRGGVMDGKRNSHPASPVATIRDFFGRI
*
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mRNA from alignment at H-paniculata_contig1823:20636..24063+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1823.4441.1 ID=mRNA_H-paniculata_contig1823.4441.1|Name=mRNA_H-paniculata_contig1823.4441.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3428bp|location=Sequence derived from alignment at H-paniculata_contig1823:20636..24063+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACGAGCAGGTGCGGGGGGGAAGCAAGAGAGAAGCAACGAAACTAGCAAA
AGGTTCTGGTTTAGAGAAGGAACCTCGCGATCTAGCGGAGGAAAGCTCTC
CAGGAATACGACATAGTTGTGGGGATAACTCCTTAGAAGGGTATGGGGAT
GATCTAGATGATGAGGCGGCGGCATGGGGAGCGGGGAATTTCGGCGAACC
GGCGGAGGGAAAGCCTGCGGGAGAGGAGGGGCAATTAGAGGCGGTCGGGG
GTGAGGGATCCTTGACGGAGAAGGATTGGAAAGGGGAAAAGCCGCGGCAT
ATGGGCAAAAATGCGAGGGTGCACTCATTGCCGTACTCGGAACACAGCTC
CTACCCGCAGCTGAAGGAGTTCGTGAGGACGGTCAGGCCCAAGTGAGTCA
CGCATGGAAGAACATTGGTATGTAGAAGTAGTGCTGGTGGAGTCATGTCT
ATTGCGTTGGTGTATCAAGGACGCTCTTCTTGAGTTCGTTGAGGCCATAT
TACTTCTGTCCCATAAGTCTGATTTACAACGGTAAAATGGTAACATCTTG
TGCAATTTTGGGTTTCGTGAAAAAGACAGGATCTCATTCGAAAGCCTATA
CGTTTAACTTGCATATACATATCTCCAAAATGATTTTTGAATTCGAATGG
TTGAGAACCAGGTATCTCAATACGTTAGTTTTTTTTTTGGAAATGTCAGA
TTTTGTAAAAACAGCCGAATAGGTCGAAATCGGTTGAAATTGATGGTTGA
TGGTTGATAAAGTCTCAACGAGACTTCCGGTTTGTTGCGTTTCGTACTTC
GTAGTACAATTAATTCAGTTCATTAGTGCTATCCTCCATATCAATCCACC
AATTGAAGACTACGTTGTAAGTGACGCTGTCAATCAGGACCAAGTGGTCC
AAAAGCCCCTCCCGCTGCCCCCCAGCGATTTCAACATTTGGTTGTACCGC
TTGAAGAGACTTTGCCAAACCAACTATAGAGTATCCGCGTCATACTGACC
GTACATGCTCTTGACCCGGCGTCCAACGTATGGTAGCCCTCCCTCCACAC
TCTAAATGTCAGGGATGCGAAAAACCTCAAATCATTGATATTGAGATCGG
GAGATTGCGCTGGCTGCGTTACGAGCTCGGTGTTCCATCCGTCCTCCCTT
CCTGCCAGGTTAAGCTTTCTCGGCATGCCCTTGTCCGTGTGCGCGCTCGT
GCCGTCCTCCTGTACGGCCACTTTCTCCTCAAACCATGGTATATTTCTCT
TGGGCGTGAGGAGGAAAACCTCAGTGTACCACTGCTGGTACCACTCGCTG
TCGATGGTGGGGTCGACCTCGTACTTATCACCCCTTTCGCGACGAGCAGC
TTGGTATGATTGGGGGGCTTCGCTTGCGCTTTTGCTCATGTGGAAACTCT
ACGTACACGTGGAGAAATGGCTCGCGAAGCAATGGAAAACCCTGATTTTC
AGCCGATTTCAGTCTATTCGGTTATTTTTCAAAATTTGCCATTTCCGACA
AAAAAAAATAATTGTTGAGGTACCATACCTGTTAGTTTAAATACTGTTTG
ACCCGCAGATAAGTCACCAACCCAGTGATCAATTTCACCTTTACCTTTAC
CCACCCTAGATGCGGAGGATTTATGGCTTACACCGGATATCAGTAAATAA
ATGTATTTTTAGTCTTCCTTGTCGTTTAATTTTTAGTCTTATTCCTTGCC
GAGCTGCTTCAATTTGACTTCTATTTAAGTAAAAAAGCGGATTCTAGAGC
AACTAGTCGGTTCGCAACCACTGTGAATTCAACAACATTTTAAGATAACT
ACATGCAAGCTGGACGTAAAGGCTTGGGAATGATATGCGTGAAACCCCCG
ATTTTCAAAATATATTCCCAAAATACCGTTACATGTCTAGACTTATGGGA
CAGAGAAAGTACGACGTAACCGGTCGAGTAATGAAAATATCTTTGCTTCC
CTTCCCACCCCCTCCCATGCTAGTTATACTATTCAGTACGACGACACTCT
TGAAAACATAACCATGCGGTTATTTCTTGTCGTTCTCCTTTCTGTTGTGA
ATCACGCAGGAAAATCGTTCCAACAGTAAATGCCTCCTCGGGCCCCGCGG
TGGAAAAACTCCTCAAGCACTTTCTCGAGTTCATGGACCTGTCGTCTGAC
CGCAAGCGCCTAGACTCGTACTTTTGCAAGTCCTCCACAGCGACCCCGAG
CAGCACTGCTTCGAGGTCGAACATCGCCACTCCTAGTGCAAGAGAGGTGC
CGCTATCCGTGTCCACGCCGGTGACAAAGAGGATACGAAAAGGTGCACGC
GGCGACGCAGGGGGTAAAGCTACGGCGGAAGCTGATTTGTTTGAGGCGCA
CAATGAAGCAAAGCTCGGGGCGGCTGCCAGGGAGGCAGCGGCGACAGTAG
TAGAAGAAATCTCAACGCGTCGCCGCGTTCAGCAACAGGAAAAAGACGAT
GACAAGGGGGCGATTGTATTACTGCCACCCCCGCGGTTACGATGCGTAGG
AGCAGCAGCGGCGCCCACTGCTTTAGCGCGGGCGGCGACCGCGGCGGCGG
CGGCGGCGGTTCCTACAGTCGATAATGTTGATATCGTCGATATGACTTCT
TGTAGCAGTGCTGTTACTGTTGCTGCTACTACTGCTATTGTGAATGATGT
CACGGCGGAACGGGAAACTTACATTAGCTCTTCTTCAATGGTAGAGGGGC
TAGCGGCAAGTTCAATAGACGTGGAGGCTCAGAAGGCTATCCTCGCGGAC
ATCGAAAGACGAAATAGGCTTCAAAGCTTTCAGCCACCTCTACTGCCGCC
GCCGCAAGAAGAAAGGTCAAAACCGAACAAGACATCAGCGACGACGACGA
TGCCAACGGTCCTAAATCCATACGCAACGCCCCCCGTGCGAGGAGGCAAA
GGCGGGAGTAGGGGAAGGGATAGGGGTGCTCGAAAAACCTCCTCGGGAGC
AAGCGCAGCAGGATGGGCCGCCAAAAGCACTTGTGATGACGAGAACCGCC
GTCCCATGTCATCGAGGGGGAAAGGTCGCCGCGGTGCGAAGGGTAGGGGG
GTGGCCAAGTCCGCGAGGGCCGCTGCTTACGAAACAGGACGAGGTGTGGA
AGGCGATCGACCGCTGGGCAAAGGGGGCATGGCAAACAAGGGGTCAGCAG
CTGTATTAAGCGGAAACTCTGTGCGGCAGAAGCGTGCGGGTGCGGTCCCT
GGGGCAGCGGCGGCCGGGGCAGCGGTTGGGGCGAAACGAGGGGGTGTTAT
GGATGGGAAGAGGAATAGTCACCCAGCCTCTCCTGTGGCGACGATTCGTG
ACTTCTTCGGTCGTATCTGAGAAGTGTCAACAAAATGTACCCGGTCGGTT
CTACCTGCAGGCAGCAAGCAGTGGGGCCATGAATTAATTGTATTTTTACA
TGCATATATTATTTCCCTTAATGCGGCC
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Coding sequence (CDS) from alignment at H-paniculata_contig1823:20636..24063+

>mRNA_H-paniculata_contig1823.4441.1 ID=mRNA_H-paniculata_contig1823.4441.1|Name=mRNA_H-paniculata_contig1823.4441.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2706bp|location=Sequence derived from alignment at H-paniculata_contig1823:20636..24063+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGCAAAAATGCGAGGGTGCACTCATTGCCGTACTCGGAACACAGCTC
CTACCCGCAGCTGAAGGAGTTCGTGAGGACGGTCAGGCCCAAATGGGCAA
AAATGCGAGGGTGCACTCATTGCCGTACTCGGAACACAGCTCCTACCCGC
AGCTGAAGGAGTTCGTGAGGACGGTCAGGCCCAAGAAAATCGTTCCAACA
GTAAATGCCTCCTCGGGCCCCGCGGTGGAAAAACTCCTCAAGCACTTTCT
CGAGTTCATGGACCTGTCGTCTGACCGCAAGCGCCTAGACTCGTACTTTT
GCAAGTCCTCCACAGCGACCCCGAGCAGCACTGCTTCGAGGTCGAACATC
GCCACTCCTAGTGCAAGAGAGGTGCCGCTATCCGTGTCCACGCCGGTGAC
AAAGAGGATACGAAAAGGTGCACGCGGCGACGCAGGGGGTAAAGCTACGG
CGGAAGCTGATTTGTTTGAGGCGCACAATGAAGCAAAGCTCGGGGCGGCT
GCCAGGGAGGCAGCGGCGACAGTAGTAGAAGAAATCTCAACGCGTCGCCG
CGTTCAGCAACAGGAAAAAGACGATGACAAGGGGGCGATTGTATTACTGC
CACCCCCGCGGTTACGATGCGTAGGAGCAGCAGCGGCGCCCACTGCTTTA
GCGCGGGCGGCGACCGCGGCGGCGGCGGCGGCGGTTCCTACAGTCGATAA
TGTTGATATCGTCGATATGACTTCTTGTAGCAGTGCTGTTACTGTTGCTG
CTACTACTGCTATTGTGAATGATGTCACGGCGGAACGGGAAACTTACATT
AGCTCTTCTTCAATGGTAGAGGGGCTAGCGGCAAGTTCAATAGACGTGGA
GGCTCAGAAGGCTATCCTCGCGGACATCGAAAGACGAAATAGGCTTCAAA
GCTTTCAGCCACCTCTACTGCCGCCGCCGCAAGAAGAAAGGTCAAAACCG
AACAAGACATCAGCGACGACGACGATGCCAACGGTCCTAAATCCATACGC
AACGCCCCCCGTGCGAGGAGGCAAAGGCGGGAGTAGGGGAAGGGATAGGG
GTGCTCGAAAAACCTCCTCGGGAGCAAGCGCAGCAGGATGGGCCGCCAAA
AGCACTTGTGATGACGAGAACCGCCGTCCCATGTCATCGAGGGGGAAAGG
TCGCCGCGGTGCGAAGGGTAGGGGGGTGGCCAAGTCCGCGAGGGCCGCTG
CTTACGAAACAGGACGAGGTGTGGAAGGCGATCGACCGCTGGGCAAAGGG
GGCATGGCAAACAAGGGGTCAGCAGCTGTATTAAGCGGAAACTCTGTGCG
GCAGAAGCGTGCGGGTGCGGTCCCTGGGGCAGCGGCGGCCGGGGCAGCGG
TTGGGGCGAAACGAGGGGGTGTTATGGATGGGAAGAGGAATAGTCACCCA
GCCTCTCCTGTGGCGACGATTCGTGACTTCTTCGGTCGTATCTGAGAAAA
TCGTTCCAACAGTAAATGCCTCCTCGGGCCCCGCGGTGGAAAAACTCCTC
AAGCACTTTCTCGAGTTCATGGACCTGTCGTCTGACCGCAAGCGCCTAGA
CTCGTACTTTTGCAAGTCCTCCACAGCGACCCCGAGCAGCACTGCTTCGA
GGTCGAACATCGCCACTCCTAGTGCAAGAGAGGTGCCGCTATCCGTGTCC
ACGCCGGTGACAAAGAGGATACGAAAAGGTGCACGCGGCGACGCAGGGGG
TAAAGCTACGGCGGAAGCTGATTTGTTTGAGGCGCACAATGAAGCAAAGC
TCGGGGCGGCTGCCAGGGAGGCAGCGGCGACAGTAGTAGAAGAAATCTCA
ACGCGTCGCCGCGTTCAGCAACAGGAAAAAGACGATGACAAGGGGGCGAT
TGTATTACTGCCACCCCCGCGGTTACGATGCGTAGGAGCAGCAGCGGCGC
CCACTGCTTTAGCGCGGGCGGCGACCGCGGCGGCGGCGGCGGCGGTTCCT
ACAGTCGATAATGTTGATATCGTCGATATGACTTCTTGTAGCAGTGCTGT
TACTGTTGCTGCTACTACTGCTATTGTGAATGATGTCACGGCGGAACGGG
AAACTTACATTAGCTCTTCTTCAATGGTAGAGGGGCTAGCGGCAAGTTCA
ATAGACGTGGAGGCTCAGAAGGCTATCCTCGCGGACATCGAAAGACGAAA
TAGGCTTCAAAGCTTTCAGCCACCTCTACTGCCGCCGCCGCAAGAAGAAA
GGTCAAAACCGAACAAGACATCAGCGACGACGACGATGCCAACGGTCCTA
AATCCATACGCAACGCCCCCCGTGCGAGGAGGCAAAGGCGGGAGTAGGGG
AAGGGATAGGGGTGCTCGAAAAACCTCCTCGGGAGCAAGCGCAGCAGGAT
GGGCCGCCAAAAGCACTTGTGATGACGAGAACCGCCGTCCCATGTCATCG
AGGGGGAAAGGTCGCCGCGGTGCGAAGGGTAGGGGGGTGGCCAAGTCCGC
GAGGGCCGCTGCTTACGAAACAGGACGAGGTGTGGAAGGCGATCGACCGC
TGGGCAAAGGGGGCATGGCAAACAAGGGGTCAGCAGCTGTATTAAGCGGA
AACTCTGTGCGGCAGAAGCGTGCGGGTGCGGTCCCTGGGGCAGCGGCGGC
CGGGGCAGCGGTTGGGGCGAAACGAGGGGGTGTTATGGATGGGAAGAGGA
ATAGTCACCCAGCCTCTCCTGTGGCGACGATTCGTGACTTCTTCGGTCGT
ATCTGA
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