prot_H-paniculata_contig1822.4436.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1822.4436.1
Unique Nameprot_H-paniculata_contig1822.4436.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length205
Homology
BLAST of mRNA_H-paniculata_contig1822.4436.1 vs. uniprot
Match: A0A6H5KN23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN23_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 6.440e-41
Identity = 79/146 (54.11%), Postives = 91/146 (62.33%), Query Frame = 0
Query:   26 EVFFGDYNGHMRPLSRMYFSSDSRCLVADHPQSVQEEVESHFCPHCNSLWAWQEAQGIGNRCLQCFECPDCDCVLTPSPTSLESLAXXXXXXXXXSLKNLPPLSPAGKYASSTASTALEFCLRCLYCHWSSEDELAVVAPDLASLA 171
            EV +GDYNG++RPLS MYFS DSRCLVADHP+SVQEEVESHFCPHC S +   +A    NRC  CFECP C CVL PSP SL+                        + ASS +S    +CLRCLYC W+SED   +VA D A LA
Sbjct:    3 EVLYGDYNGYLRPLSLMYFSLDSRCLVADHPRSVQEEVESHFCPHCTSFFRTPDAVSTENRCPHCFECPCCRCVLVPSPVSLD------------------------RSASSFSSAGTSYCLRCLYCQWTSEDS-GLVAQDPAGLA 123          
BLAST of mRNA_H-paniculata_contig1822.4436.1 vs. uniprot
Match: D7FRF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRF1_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 2.350e-20
Identity = 42/60 (70.00%), Postives = 48/60 (80.00%), Query Frame = 0
Query:   26 EVFFGDYNGHMRPLSRMYFSSDSRCLVADHPQSVQEEVESHFCPHCNSLWAWQEAQGIGN 85
            EV +GDYNG++RPLS MYFS DSRCLVADHP+SVQEEVESHFCPHC S +   +A    N
Sbjct:    3 EVLYGDYNGYLRPLSLMYFSLDSRCLVADHPRSVQEEVESHFCPHCTSFFRTPDAMSAEN 62          
BLAST of mRNA_H-paniculata_contig1822.4436.1 vs. uniprot
Match: W7T460_9STRA (Dynactin p62 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T460_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 4.990e-15
Identity = 45/138 (32.61%), Postives = 66/138 (47.83%), Query Frame = 0
Query:   26 EVFFGDYNGHMRPLSRMYFSSDSRCLVADHPQSVQEEVESHFCPHCNSLWAWQEAQGIGNRCLQCFECPDCDCVLTPSPTSLESLAXXXXXXXXXSLKNLPPLSPAGKYASSTASTALEFCLRCLYCHWSSEDELAVV 163
            +V F DY G   PL+ +++S+ S+CLV+ HP+S  EEVES +C HC + +A  EA    +RC +CF+CP C   L       ES                        +  + A     +  RC YC WSS D + ++
Sbjct:   37 KVVFTDYQGWWAPLTHLFYSNASQCLVSAHPESSIEEVESFYCSHCLNYFADAEAASSYHRCPRCFDCPQCTSALLIISVDEES-----------------------NHEENDAG----YTFRCGYCRWSSADSIGLI 147          
BLAST of mRNA_H-paniculata_contig1822.4436.1 vs. uniprot
Match: A0A7S1ISB2_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1ISB2_9EUGL)

HSP 1 Score: 52.4 bits (124), Expect = 3.580e-5
Identity = 25/85 (29.41%), Postives = 42/85 (49.41%), Query Frame = 0
Query:   24 PTEVFFGDYNGHMRPLSRMYFSSDSRCLVADHPQSVQEEVESHFCPHCNSLWAWQEAQGIGNRCLQCFECPDCDCVLTPSPTSLE 108
            P   ++G        L  ++ S  +  LV     S+Q+E+E+++CP C   +  Q    IG RCL C +CP C   L+ S  +++
Sbjct:    9 PVAAYYGTSGAQRLRLHDLFLSPVTWTLVTR--DSLQQEIETYYCPQCLQEFRTQTQLDIGGRCLDCCDCPVCGTGLSDSVRTVD 91          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1822.4436.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KN23_9PHAE6.440e-4154.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRF1_ECTSI2.350e-2070.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7T460_9STRA4.990e-1532.61Dynactin p62 n=2 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A7S1ISB2_9EUGL3.580e-529.41Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008603Dynactin subunit 4PANTHERPTHR13034DYNACTIN P62 SUBUNITcoord: 34..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1822contigH-paniculata_contig1822:3092..9744 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1822.4436.1mRNA_H-paniculata_contig1822.4436.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1822 3090..9744 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1822.4436.1 ID=prot_H-paniculata_contig1822.4436.1|Name=mRNA_H-paniculata_contig1822.4436.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=205bp
SVYAESNEARVPAATMTSSAQPHPTEVFFGDYNGHMRPLSRMYFSSDSRC
LVADHPQSVQEEVESHFCPHCNSLWAWQEAQGIGNRCLQCFECPDCDCVL
TPSPTSLESLALAFSPSPSPSLKNLPPLSPAGKYASSTASTALEFCLRCL
YCHWSSEDELAVVAPDLASLAEAMSAGEKKRADGGAGVVGLVAAAKQREM
LALRE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008603DCTN4