prot_H-paniculata_contig18216.4433.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18216.4433.1
Unique Nameprot_H-paniculata_contig18216.4433.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length76
Homology
BLAST of mRNA_H-paniculata_contig18216.4433.1 vs. uniprot
Match: A0A2G9H6K9_9LAMI (DNA polymerase n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9H6K9_9LAMI)

HSP 1 Score: 62.8 bits (151), Expect = 9.870e-10
Identity = 26/70 (37.14%), Postives = 50/70 (71.43%), Query Frame = 0
Query:    1 LSELYDVVGNNERALSYQRAASILRSLPRRLLAAKQIRHVPGIGKQIAENIDEILETGKLERLDRLRQEE 70
            L ++Y  +G++ R+ SY +A +++  LP ++ +A Q++H+PGIGK + ++I EI+ TGKL +L+   ++E
Sbjct:  220 LIDIYRALGDDRRSFSYHKAITVIEKLPFKIESADQVKHLPGIGKSLQDHIQEIVNTGKLSKLEHFEKDE 289          
BLAST of mRNA_H-paniculata_contig18216.4433.1 vs. uniprot
Match: A0A022QLW0_ERYGU (DNA polymerase n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QLW0_ERYGU)

HSP 1 Score: 62.0 bits (149), Expect = 1.840e-9
Identity = 27/70 (38.57%), Postives = 47/70 (67.14%), Query Frame = 0
Query:    1 LSELYDVVGNNERALSYQRAASILRSLPRRLLAAKQIRHVPGIGKQIAENIDEILETGKLERLDRLRQEE 70
            L ++Y  +G+  R+ SY +A  ++  LP R+ +A Q++H+PGIGK + ++I EI+ TGKL +L+    +E
Sbjct:  215 LIDIYRALGDERRSFSYYKAIPVIEKLPFRIESADQVKHLPGIGKSLQDHIQEIVNTGKLSKLEHFENDE 284          
BLAST of mRNA_H-paniculata_contig18216.4433.1 vs. uniprot
Match: A0A2Z7BVJ5_9LAMI (DNA polymerase n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7BVJ5_9LAMI)

HSP 1 Score: 61.6 bits (148), Expect = 2.520e-9
Identity = 26/70 (37.14%), Postives = 49/70 (70.00%), Query Frame = 0
Query:    1 LSELYDVVGNNERALSYQRAASILRSLPRRLLAAKQIRHVPGIGKQIAENIDEILETGKLERLDRLRQEE 70
            L ++Y  +G++ R+ SY +A  ++  LP R+ +A +++H+PGIGK + ++I EI+ TGKL +L+   ++E
Sbjct:  217 LIDIYRALGDDRRSFSYYKAIPVIEKLPFRIESADEVKHLPGIGKSLQDHIQEIVNTGKLSKLEHFEKDE 286          
BLAST of mRNA_H-paniculata_contig18216.4433.1 vs. uniprot
Match: A0A4D9BPL1_SALSN (DNA polymerase n=4 Tax=Salvia TaxID=21880 RepID=A0A4D9BPL1_SALSN)

HSP 1 Score: 61.2 bits (147), Expect = 3.470e-9
Identity = 27/76 (35.53%), Postives = 51/76 (67.11%), Query Frame = 0
Query:    1 LSELYDVVGNNERALSYQRAASILRSLPRRLLAAKQIRHVPGIGKQIAENIDEILETGKLERLDRLRQEEMNVVCQ 76
            L ++Y  +G + R+ SY +A  ++  LP ++ +A Q++H+PGIGK + ++I EI+ TG+L +L+   ++E   +CQ
Sbjct:  225 LIDIYRALGEDRRSFSYYKAIPVIEKLPFKIESADQVKHLPGIGKSLQDHIQEIVNTGRLSKLEHFEKDEK--ICQ 298          
BLAST of mRNA_H-paniculata_contig18216.4433.1 vs. uniprot
Match: UPI000643401E (DNA polymerase lambda isoform X2 n=1 Tax=Condylura cristata TaxID=143302 RepID=UPI000643401E)

HSP 1 Score: 59.7 bits (143), Expect = 1.170e-8
Identity = 29/66 (43.94%), Postives = 47/66 (71.21%), Query Frame = 0
Query:    1 LSELYDVVGNNERALSYQRAASILRSLPRRLLAAKQIRHVPGIGKQIAENIDEILETGKLERLDRL 66
            L++ Y V G+  RALSY +A + L+S  + + + ++  H+PGIGK++AE I+EILE+G L +LD +
Sbjct:   93 LAKAYSVQGDKWRALSYAKAINALKSFHKAVTSYQEACHIPGIGKRMAEKIEEILESGHLRKLDHI 158          
BLAST of mRNA_H-paniculata_contig18216.4433.1 vs. uniprot
Match: A0A328E9F3_9ASTE (DNA polymerase n=1 Tax=Cuscuta australis TaxID=267555 RepID=A0A328E9F3_9ASTE)

HSP 1 Score: 58.9 bits (141), Expect = 1.240e-8
Identity = 26/70 (37.14%), Postives = 46/70 (65.71%), Query Frame = 0
Query:    1 LSELYDVVGNNERALSYQRAASILRSLPRRLLAAKQIRHVPGIGKQIAENIDEILETGKLERLDRLRQEE 70
            L  +Y  +G++ R+ SY +A S++  LP +++   Q+RH+P IGK + ++I EI+ TGKL +L+    +E
Sbjct:   34 LVSIYRALGDDRRSFSYNKAISVIEKLPFKIVNVDQVRHLPSIGKSMQDHIMEIVNTGKLSKLENFENDE 103          
BLAST of mRNA_H-paniculata_contig18216.4433.1 vs. uniprot
Match: A0A484MY99_9ASTE (DNA polymerase n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484MY99_9ASTE)

HSP 1 Score: 58.9 bits (141), Expect = 2.230e-8
Identity = 26/70 (37.14%), Postives = 46/70 (65.71%), Query Frame = 0
Query:    1 LSELYDVVGNNERALSYQRAASILRSLPRRLLAAKQIRHVPGIGKQIAENIDEILETGKLERLDRLRQEE 70
            L  +Y  +G++ R+ SY +A S++  LP +++   Q+RH+P IGK + ++I EI+ TGKL +L+    +E
Sbjct:  210 LVSIYRALGDDRRSFSYNKAISVIEKLPFKIVNVDQVRHLPSIGKSMQDHIMEIVNTGKLSKLENFENDE 279          
BLAST of mRNA_H-paniculata_contig18216.4433.1 vs. uniprot
Match: A0A6A4L9A0_9ERIC (DNA polymerase (Fragment) n=2 Tax=Rhododendron TaxID=4346 RepID=A0A6A4L9A0_9ERIC)

HSP 1 Score: 58.5 bits (140), Expect = 3.070e-8
Identity = 25/70 (35.71%), Postives = 46/70 (65.71%), Query Frame = 0
Query:    1 LSELYDVVGNNERALSYQRAASILRSLPRRLLAAKQIRHVPGIGKQIAENIDEILETGKLERLDRLRQEE 70
            L  +Y  +G++ R+ SY +A +++  LP R+ +  Q++H+P IGK + ++I EI+ TGKL +L+    +E
Sbjct:  225 LMNIYRALGDDRRSFSYSKAIAVIEKLPFRIESVDQVKHLPAIGKSMQDHIQEIVNTGKLSKLEHFETDE 294          
BLAST of mRNA_H-paniculata_contig18216.4433.1 vs. uniprot
Match: A0A833VN95_9POAL (DNA polymerase n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833VN95_9POAL)

HSP 1 Score: 58.2 bits (139), Expect = 4.200e-8
Identity = 25/70 (35.71%), Postives = 46/70 (65.71%), Query Frame = 0
Query:    1 LSELYDVVGNNERALSYQRAASILRSLPRRLLAAKQIRHVPGIGKQIAENIDEILETGKLERLDRLRQEE 70
            L  +Y  +G++ R+ SY +A  ++  LP ++ +  Q++H+P IGK + ++IDEI+ TGKL +L+    +E
Sbjct:  226 LINIYRALGDDRRSFSYYKAIPVIEKLPFKIESVDQVKHLPAIGKSLQDHIDEIVNTGKLSKLEYFENDE 295          
BLAST of mRNA_H-paniculata_contig18216.4433.1 vs. uniprot
Match: A0A8J6DZX3_GALPY (DNA polymerase n=5 Tax=Talpidae TaxID=9373 RepID=A0A8J6DZX3_GALPY)

HSP 1 Score: 58.2 bits (139), Expect = 4.220e-8
Identity = 28/66 (42.42%), Postives = 46/66 (69.70%), Query Frame = 0
Query:    1 LSELYDVVGNNERALSYQRAASILRSLPRRLLAAKQIRHVPGIGKQIAENIDEILETGKLERLDRL 66
            L++ Y V G+  RAL Y +A + L+S  + + + ++  H+PGIGK++AE I+EILE+G L +LD +
Sbjct:  277 LAKAYSVQGDKWRALGYAKAINALKSFHKAVTSYQEACHIPGIGKRMAEKIEEILESGHLRKLDHI 342          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18216.4433.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2G9H6K9_9LAMI9.870e-1037.14DNA polymerase n=1 Tax=Handroanthus impetiginosus ... [more]
A0A022QLW0_ERYGU1.840e-938.57DNA polymerase n=1 Tax=Erythranthe guttata TaxID=4... [more]
A0A2Z7BVJ5_9LAMI2.520e-937.14DNA polymerase n=1 Tax=Dorcoceras hygrometricum Ta... [more]
A0A4D9BPL1_SALSN3.470e-935.53DNA polymerase n=4 Tax=Salvia TaxID=21880 RepID=A0... [more]
UPI000643401E1.170e-843.94DNA polymerase lambda isoform X2 n=1 Tax=Condylura... [more]
A0A328E9F3_9ASTE1.240e-837.14DNA polymerase n=1 Tax=Cuscuta australis TaxID=267... [more]
A0A484MY99_9ASTE2.230e-837.14DNA polymerase n=1 Tax=Cuscuta campestris TaxID=13... [more]
A0A6A4L9A0_9ERIC3.070e-835.71DNA polymerase (Fragment) n=2 Tax=Rhododendron Tax... [more]
A0A833VN95_9POAL4.200e-835.71DNA polymerase n=1 Tax=Carex littledalei TaxID=544... [more]
A0A8J6DZX3_GALPY4.220e-842.42DNA polymerase n=5 Tax=Talpidae TaxID=9373 RepID=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010996DNA polymerase beta-like, N-terminal domainPFAMPF14716HHH_8coord: 2..56
e-value: 1.6E-13
score: 50.8
IPR027421DNA polymerase lambda lyase domain superfamilyGENE3D1.10.150.110coord: 1..69
e-value: 8.0E-20
score: 72.7
IPR027421DNA polymerase lambda lyase domain superfamilySUPERFAMILY47802DNA polymerase beta, N-terminal domain-likecoord: 2..67
NoneNo IPR availablePANTHERPTHR11276DNA POLYMERASE TYPE-X FAMILY MEMBERcoord: 2..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18216contigH-paniculata_contig18216:2745..3710 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18216.4433.1mRNA_H-paniculata_contig18216.4433.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18216 2744..3710 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18216.4433.1 ID=prot_H-paniculata_contig18216.4433.1|Name=mRNA_H-paniculata_contig18216.4433.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=76bp
LSELYDVVGNNERALSYQRAASILRSLPRRLLAAKQIRHVPGIGKQIAEN
IDEILETGKLERLDRLRQEEMNVVCQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010996DNA_pol_b-like_N
IPR027421DNA_pol_lamdba_lyase_dom_sf