mRNA_H-paniculata_contig18212.4432.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig18212.4432.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 102 bits (255), Expect = 1.090e-22 Identity = 50/117 (42.74%), Postives = 75/117 (64.10%), Query Frame = 1
Query: 1 MGATSVKRRITPSLSPMHRKNRVDFILDQAARNCITFRSGFQTIHIDEAWFSLIRDRNRVRMSRGGRV-GSTKVQHNSHISKVLFVCALSRPDPSHDFHGKIGIWCVRVIKQAQRNS 348
+GA RI PSLS +++R+DFI D+ + +H+DE+WF L+R++ +VR+ G V G +V H SH+ K++ + A +RPDP+HDF GKIGIW + VI+ AQR+S
Sbjct: 112 LGAAKKAGRIKPSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSS 228
BLAST of mRNA_H-paniculata_contig18212.4432.1 vs. uniprot
Match: W4FMD0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FMD0_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 3.620e-14 Identity = 59/196 (30.10%), Postives = 91/196 (46.43%), Query Frame = 1
Query: 25 RITPSLSPMHRKNRVDFIL-DQAARNCITFRSGFQTIHIDEAWFSLIRDRNRVRMSRGGRVGSTKVQHNSHISKVLFVCALSRP--DPSHD--FHGKIGIWCVRVIKQAQRNSAQRERGQKY------------EMPWLKGEEIVAQQGGATPHTE-KDTPQKLNKLGRDGGWSVNLVTQSVQSPDFNMNDLGLFA 558
R+ P L+ +R R++F D + + F +H+DE WF+ +DR +V +++G R+G + I KV+F+ A++RP D + + F GKIG+W A R S R G Y +MP + + +V Q A+PH D + GW + Q SPD N+ DLG FA
Sbjct: 336 RLKPLLTDENRTERIEFCRSDGSGLAELPFLDMHDVVHLDEKWFNADKDRRKVYLTKGERIGRRACKSKRFIPKVMFLAAVARPQYDDAGNLIFDGKIGMWPFVTSTPAIRTSRNRPAGTIYGHYSGQRERRGAKMPSV-SKRVVIQHDNASPHASVSDGVLDAIQGHFADGWEFRVRRQPPNSPDLNVLDLGFFA 530
BLAST of mRNA_H-paniculata_contig18212.4432.1 vs. uniprot
Match: A0A6H5KWV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWV2_9PHAE) HSP 1 Score: 76.6 bits (187), Expect = 5.670e-13 Identity = 55/175 (31.43%), Postives = 75/175 (42.86%), Query Frame = 1
Query: 109 FRSGFQTIHIDEAWFSLIRDRNRVRMSRGGRVGSTKVQHNSHISKVLFVCALSRP----DPSHDFHGKIGIWCVRVIKQAQRNSAQRERGQKYE-----------------MPWLKGEE-----IVAQQGGATPHTEKDTPQKLNKLGRDGGWSVNLVTQSVQSPDFNMNDLGLF 555
F F +H+DE WF + + R G + KVQH SH+ KV+F+ A++RP S F GKIGI+ V + AQRN G P ++ + I AQQ A H + P + G+ G + LV Q SPD N+ DLG F
Sbjct: 51 FHHFFDFLHLDEKWFYICKQGQRYYFYEGEHLPIRKVQHKSHVIKVMFLAAVARPRYDSSRSRQFDGKIGIYPFTVQRAAQRNGRNMAAGTMVTHSVEVNRTLYKKLNNNVFPDIRAKFPSSPIIFAQQENAPGHRAMEDPDVVAAAGQGAG-RIELVNQPPNSPDCNILDLGFF 224
BLAST of mRNA_H-paniculata_contig18212.4432.1 vs. uniprot
Match: UPI001C2541F4 (uncharacterized protein LOC121800620 n=4 Tax=Salvia splendens TaxID=180675 RepID=UPI001C2541F4) HSP 1 Score: 73.6 bits (179), Expect = 5.930e-12 Identity = 56/210 (26.67%), Postives = 89/210 (42.38%), Query Frame = 1
Query: 28 ITPSLSPMHRKNRVDFILDQAARNC----ITFRSGFQTIHIDEAWFSLIRDRNRVRMSRGGRVGSTKVQHNSHISKVLFVCALSRP----DPSHDFHGKIGIWCVRVIKQAQRNSAQRERGQ--------------------------KYEMPWLKGEEIVAQQGGATPHTEKDTPQKLNKLGRDGGWSVNLVTQSVQSPDFNMNDLGLF 555
I P+L+ ++ R+ + L + + + F S +HIDE WF + + +R + + I+KV+F+CA+SRP D F GK+GI+ + AQR S R +G K + P +EI QQ ATPH + + + G+ ++L+ Q SPD N+ DLG F
Sbjct: 131 IKPALTDANKLARLKWCLSKLEPHINAGRVQFESMHNVVHIDEKWFYMTKTSDRYYLLPDEVEPYRACKSKRFITKVMFMCAVSRPVFGLDGQTKFDGKLGIFPFTELVAAQRKSKNRAKGTLETKPISSVNKSVMRDCIINKIVPAIKAKWPEWASKEIYIQQDNATPHIN-GVDAEFEAIAKSDGFKIHLICQPPNSPDTNILDLGFF 339
BLAST of mRNA_H-paniculata_contig18212.4432.1 vs. uniprot
Match: A0A484N8H9_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484N8H9_9ASTE) HSP 1 Score: 70.1 bits (170), Expect = 9.640e-11 Identity = 50/179 (27.93%), Postives = 81/179 (45.25%), Query Frame = 1
Query: 106 TFRSGFQTIHIDEAWFSLIRDRNRVRMSRGGRVGSTKVQHNSHISKVLFVCALSRPDPSHD----FHGKIGIWCVRVIKQAQRNSAQRERGQ-------------------KYEMPWLKGE------EIVAQQGGATPHTEKDTPQKLNKLGRDGGWSVNLVTQSVQSPDFNMNDLGLF 555
TF + IHIDE WF++ +++ Q SHI K++F+ A+SRP +D + GKIGI+ QA+R+S R G + +P +K + +++ QQ A PH + + + + ++G W++ L Q SPD N+ DLG F
Sbjct: 202 TFHHFYDYIHIDEKWFNITKEKTTFYALPDEPDPYRTAQSKSHIPKIMFLAAVSRPRFGNDGAVVWDGKIGIFPFTYEAQAKRSSKNRPAGTLEVKATTSINRDEIKKMLLEKLLPAIKEKWPGPTRDVIIQQDNAKPHVDVNDTDFV-QAAQEGNWNIKLQFQPPNSPDLNVLDLGYF 379
BLAST of mRNA_H-paniculata_contig18212.4432.1 vs. uniprot
Match: A0A6A4YYS6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YYS6_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 1.180e-10 Identity = 52/181 (28.73%), Postives = 81/181 (44.75%), Query Frame = 1
Query: 103 ITFRSGFQTIHIDEAWFSLIRDRNRVRMSRGGRVGSTKVQHNSHISKVLFVCALSRP--DPSHD--FHGKIGIWCVRVIKQAQRNSAQRERG-----------QKYE-------MPWLKGE------EIVAQQGGATPHTE-KDTPQKLNKLGRDGGWSVNLVTQSVQSPDFNMNDLGLFA 558
+ F +H+DE WF+ +DR +V +++G R+G + I KV+F+ A++RP D + + F GKIG+W A R S R G ++Y+ +P +K + +V Q A+PH D + GW + Q SPD N+ DLG FA
Sbjct: 137 LPFLDMHDVVHLDEKWFNADKDRRKVYLTKGERIGRRACKSKRFIPKVMFLAAVARPQYDDAGNLIFDGKIGMWPFVTSTPAIRTSRNRPAGTMVTTLVNVNAEEYQNFVLNRVLPAIKAKMPSVSKRVVIQHDNASPHASVSDGVLDAIQGHFADGWEFRVRRQPPNSPDLNVLDLGFFA 317
BLAST of mRNA_H-paniculata_contig18212.4432.1 vs. uniprot
Match: A0A024TAS5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TAS5_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 4.790e-10 Identity = 45/141 (31.91%), Postives = 63/141 (44.68%), Query Frame = 1
Query: 217 VQHNSHISKVLFVCALSRPDPSHDFHGKIGIWCVRVIKQAQRNSAQRERGQ-------------------------KYEMPW---LKGEEIVAQQGGATPHTEKDTPQKLNKLGRDGGWSVNLVTQSVQSPDFNMNDLGLF 555
+Q SHI+KV+F+CA++RP D G++G W + A R+S R G K + W + G IV QQ A PH D + + DGGW++ + Q QSPD N+ DLG F
Sbjct: 21 LQSKSHITKVMFLCAVARPRNGWD--GRLGCWEIVERAAAVRSSHNRPAGTEVVKSVVVTKDVYRRILVDKVVPAIKSKWKWPVGVDGGAIVLQQDNARPHIAPDDAEFVT-ASEDGGWTIRIENQPAQSPDMNVLDLGFF 158
BLAST of mRNA_H-paniculata_contig18212.4432.1 vs. uniprot
Match: A0A024TJH6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TJH6_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.080e-8 Identity = 47/172 (27.33%), Postives = 72/172 (41.86%), Query Frame = 1
Query: 121 FQTIHIDEAWFSLIRDRNRVRMSRGGRVGSTKVQHNSHISKVLFVCALSRPDPSHDFHGKIGIWCVRVIKQAQRNSAQRERGQ--------------------------KYEMPWLKGEEIVAQQGGATPHTEKDTPQKLNKLGRDGGWSVNLVTQSVQSPDFNMNDLGLFA 558
+ + +DE WF+ +D + + G V + I+KV+F+CA++RP KIG+W +A+R+S R G K +P + + +V Q ATPH D L + DG W+ + Q SPD N+ DLG FA
Sbjct: 2 WDVVLLDEKWFNADKDCRKEYLLEGEEVPRRACKSKGFITKVMFLCAVARPQMDIGVDEKIGLWPFVSQSRARRSSRNRPAGSMVITTLINVDATTYRDYVLNKVVPAIKASLPCV-SKRVVLQHDNATPHRSVDD-DALAGVSTDG-WTFVVRRQPPNSPDLNVLDLGFFA 170
BLAST of mRNA_H-paniculata_contig18212.4432.1 vs. uniprot
Match: A0A1R3I5M9_9ROSI (Uncharacterized protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3I5M9_9ROSI) HSP 1 Score: 62.4 bits (150), Expect = 4.230e-8 Identity = 54/207 (26.09%), Postives = 86/207 (41.55%), Query Frame = 1
Query: 28 ITPSLSPMHRKNRVDFILDQAARNCITFRSGFQTIHIDEAWFSLIRDRNRVRMSRGGRVGSTKVQHNSHISKVLFVCALSRP--DPSHD--FHGKIGIWCVRVIKQAQRNSAQRERG----------QKYEMPWLKGEEIVAQQGGATPHTEKDTP----------------QKLNKLGRDGGWSVNLVTQSVQSPDFNMNDLGLFA 558
+ P+L+ ++ R+ F L N TF+ + TIHIDE WF LIR + + + I KV+F+ A++RP D + + F GKIG++ + + A+R+S R G K M +++ P +P K ++ G++V L Q SPD N+ DLG F
Sbjct: 139 LRPNLTFENKIARLRFCLKMLESNDSTFKGMYDTIHIDEKWFYLIRKSVNYYLLPDEEEPHRTCKSKNFIPKVMFLAAVARPRFDTAGNVLFSGKIGVFPLVTKEPAKRSSVNRHAGTLETKPITTVNKDVMKTFLINKVIPTIREKWPRDNMRSPIYIQQDNARPHVKFDDADFKKATKENGFNVILTNQPANSPDLNVLDLGFFC 345
BLAST of mRNA_H-paniculata_contig18212.4432.1 vs. uniprot
Match: A0A3R6XBS4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6XBS4_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 4.900e-7 Identity = 50/162 (30.86%), Postives = 72/162 (44.44%), Query Frame = 1
Query: 7 ATSVKRRIT---PSLSPMHRKNRVDFILD--QAARNCITFRSGFQTIHIDEAWFSLIRDRNRVRMSRGGRVGSTKVQHNSHISKVLFVCALSRPDPSHDF------HGKIGIWCVRVIKQAQRNSAQRERGQKYEMPWLKGEEIVAQQGGATPHTEKDTPQK 459
A ++RR T P LS + +R F+ QA S H+DE WF + + R + + KVQ HI+KV F+CA++RP DF GKIG+W + K A R S R++ K L+G+ + PH +KD K
Sbjct: 105 ANKLRRRTTRVKPMLSVKQKSDRFKFVKKFVQAGHGW----SWTMCTHLDEKWFYITQFNRRFYLWHDEPIPQRKVQSKRHITKVTFLCAVTRP--RFDFGRRVIWDGKIGLWPIVETKVAARRSKNRDQAFK-----LEGDNVYK-----LPHLKKDVQLK 250 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18212.4432.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig18212.4432.1 >prot_H-paniculata_contig18212.4432.1 ID=prot_H-paniculata_contig18212.4432.1|Name=mRNA_H-paniculata_contig18212.4432.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=188bp MGATSVKRRITPSLSPMHRKNRVDFILDQAARNCITFRSGFQTIHIDEAWback to top mRNA from alignment at H-paniculata_contig18212:3772..4410- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig18212.4432.1 ID=mRNA_H-paniculata_contig18212.4432.1|Name=mRNA_H-paniculata_contig18212.4432.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=639bp|location=Sequence derived from alignment at H-paniculata_contig18212:3772..4410- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig18212:3772..4410- >mRNA_H-paniculata_contig18212.4432.1 ID=mRNA_H-paniculata_contig18212.4432.1|Name=mRNA_H-paniculata_contig18212.4432.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1128bp|location=Sequence derived from alignment at H-paniculata_contig18212:3772..4410- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |