mRNA_H-paniculata_contig18210.4430.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig18210.4430.1 vs. uniprot
Match: A0A6H5L9W7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9W7_9PHAE) HSP 1 Score: 119 bits (299), Expect = 6.270e-30 Identity = 59/68 (86.76%), Postives = 63/68 (92.65%), Query Frame = 1
Query: 1 SGMPPFMAAWAGQQLRKINGKDDLTLLEFCMSLTDASEIRQYLAAYLGSTPEVSSFATEFLQRKQSLR 204
SGM P MA+WA QQL+K++GKDDLTLLEFCMSLTDASEIRQYLAAYLGSTPEVSSFATEFLQRKQ R
Sbjct: 556 SGMSPAMASWASQQLKKMSGKDDLTLLEFCMSLTDASEIRQYLAAYLGSTPEVSSFATEFLQRKQQGR 623
BLAST of mRNA_H-paniculata_contig18210.4430.1 vs. uniprot
Match: A0A835ZDV0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDV0_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.990e-26 Identity = 47/65 (72.31%), Postives = 57/65 (87.69%), Query Frame = 1
Query: 4 GMPPFMAAWAGQQLRKINGKDDLTLLEFCMSLTDASEIRQYLAAYLGSTPEVSSFATEFLQRKQS 198
GMPP MAAWA +L+K+ G +D+TLL+FCMS TDASE+R+ LAAYLGSTP+VSSFAT FLQRKQ+
Sbjct: 2 GMPPDMAAWAQAELKKLGGGEDITLLDFCMSSTDASEVREVLAAYLGSTPQVSSFATNFLQRKQA 66
BLAST of mRNA_H-paniculata_contig18210.4430.1 vs. uniprot
Match: A0A2D4BK92_PYTIN (GYF domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK92_PYTIN) HSP 1 Score: 92.8 bits (229), Expect = 1.970e-20 Identity = 43/67 (64.18%), Postives = 52/67 (77.61%), Query Frame = 1
Query: 1 SGMPPFMAAWAGQQLRKINGKDDLTLLEFCMSLTDASEIRQYLAAYLGSTPEVSSFATEFLQRKQSL 201
S MP AW + L+ ING DDLTL+E+C +L D EIR+YLAAYLGSTP VS+FATEF+QRK+SL
Sbjct: 780 SSMPSEFMAWCAKNLKAINGSDDLTLVEYCATLEDPGEIREYLAAYLGSTPRVSAFATEFIQRKKSL 846
BLAST of mRNA_H-paniculata_contig18210.4430.1 vs. uniprot
Match: A0A7S2LIW4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LIW4_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 3.280e-20 Identity = 38/59 (64.41%), Postives = 49/59 (83.05%), Query Frame = 1
Query: 7 MPPFMAAWAGQQLRKINGKDDLTLLEFCMSLTDASEIRQYLAAYLGSTPEVSSFATEFL 183
M P M W Q++K+NG DDLTL+ FCM+LTD+ EIRQYL+AYLGSTP+V++FATEF+
Sbjct: 108 MTPTMEKWCKDQMQKLNGSDDLTLVTFCMTLTDSDEIRQYLSAYLGSTPQVNNFATEFI 166
BLAST of mRNA_H-paniculata_contig18210.4430.1 vs. uniprot
Match: A0A7S2RY64_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RY64_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 3.650e-20 Identity = 41/62 (66.13%), Postives = 50/62 (80.65%), Query Frame = 1
Query: 7 MPPFMAAWAGQQLRKINGKDDLTLLEFCMSLTDASEIRQYLAAYLGSTPEVSSFATEFLQRK 192
M P + AW +Q+RK+NG DDLTL+ FCM+LTD EIRQYL AYLGSTP+V+SFATEF+ K
Sbjct: 585 MTPALEAWCREQMRKLNGSDDLTLVAFCMTLTDTVEIRQYLTAYLGSTPQVNSFATEFINHK 646
BLAST of mRNA_H-paniculata_contig18210.4430.1 vs. uniprot
Match: A0A7S1GGJ9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1GGJ9_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 6.080e-19 Identity = 39/62 (62.90%), Postives = 51/62 (82.26%), Query Frame = 1
Query: 7 MPPFMAAWAGQQLRKINGKDDLTLLEFCMSLTDASEIRQYLAAYLGSTPEVSSFATEFLQRK 192
M M W Q++K+NG DDLTL+ FCM+LTD+ EIRQYL+AYLGSTP+V++FATEF++RK
Sbjct: 1016 MTSTMEKWCKDQMQKLNGSDDLTLVTFCMTLTDSDEIRQYLSAYLGSTPQVNNFATEFIKRK 1077
BLAST of mRNA_H-paniculata_contig18210.4430.1 vs. uniprot
Match: A0A8K1C681_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C681_PYTOL) HSP 1 Score: 88.2 bits (217), Expect = 8.290e-19 Identity = 41/61 (67.21%), Postives = 52/61 (85.25%), Query Frame = 1
Query: 16 FMAAWAGQQLRKINGKDDLTLLEFCMSLTDASEIRQYLAAYLGSTPEVSSFATEFLQRKQS 198
FM+ W +QL+ ING DDLTL+E+C +L D EIR+YLAAYLGSTP+VS+FATEF+QRK+S
Sbjct: 936 FMS-WCAKQLKSINGSDDLTLVEYCATLEDPGEIREYLAAYLGSTPKVSAFATEFIQRKKS 995
BLAST of mRNA_H-paniculata_contig18210.4430.1 vs. uniprot
Match: A0A5D6Y3L8_9STRA (GYF domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3L8_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.130e-18 Identity = 40/65 (61.54%), Postives = 53/65 (81.54%), Query Frame = 1
Query: 1 SGMPPFMAAWAGQQLRKINGKDDLTLLEFCMSLTDASEIRQYLAAYLGSTPEVSSFATEFLQRKQ 195
+G+ AWA +Q + I+G+DDLTL+E+C+SL D EIR+YLAAYLGSTP VS+FATEF+QRK+
Sbjct: 766 AGVSSEFMAWAAKQYQLISGRDDLTLVEYCVSLEDPGEIREYLAAYLGSTPRVSAFATEFIQRKK 830
BLAST of mRNA_H-paniculata_contig18210.4430.1 vs. uniprot
Match: A0A7S1CZA9_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZA9_CYCTE) HSP 1 Score: 86.3 bits (212), Expect = 1.280e-18 Identity = 37/62 (59.68%), Postives = 49/62 (79.03%), Query Frame = 1
Query: 7 MPPFMAAWAGQQLRKINGKDDLTLLEFCMSLTDASEIRQYLAAYLGSTPEVSSFATEFLQRK 192
M P + +W +Q+ K+NG DDLTL+ FCM+LTD EIRQYL AYLGSTP+V +FATEF+ ++
Sbjct: 228 MSPALESWCKEQMTKLNGSDDLTLVAFCMTLTDPVEIRQYLTAYLGSTPQVGNFATEFISKR 289
BLAST of mRNA_H-paniculata_contig18210.4430.1 vs. uniprot
Match: A0A7S2EIP2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EIP2_TRICV) HSP 1 Score: 83.2 bits (204), Expect = 1.670e-18 Identity = 36/62 (58.06%), Postives = 49/62 (79.03%), Query Frame = 1
Query: 7 MPPFMAAWAGQQLRKINGKDDLTLLEFCMSLTDASEIRQYLAAYLGSTPEVSSFATEFLQRK 192
M P + W +Q+RKI+G +DLTL+ FCM+L+D EIRQYL AYLG+TP+V++FA EF+ RK
Sbjct: 85 MSPALENWCKEQMRKISGSEDLTLVSFCMTLSDPVEIRQYLTAYLGTTPQVNNFAAEFINRK 146 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18210.4430.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig18210.4430.1 >prot_H-paniculata_contig18210.4430.1 ID=prot_H-paniculata_contig18210.4430.1|Name=mRNA_H-paniculata_contig18210.4430.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=66bp MPPFMAAWAGQQLRKINGKDDLTLLEFCMSLTDASEIRQYLAAYLGSTPEback to top mRNA from alignment at H-paniculata_contig18210:4004..4641- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig18210.4430.1 ID=mRNA_H-paniculata_contig18210.4430.1|Name=mRNA_H-paniculata_contig18210.4430.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=638bp|location=Sequence derived from alignment at H-paniculata_contig18210:4004..4641- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig18210:4004..4641- >mRNA_H-paniculata_contig18210.4430.1 ID=mRNA_H-paniculata_contig18210.4430.1|Name=mRNA_H-paniculata_contig18210.4430.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=396bp|location=Sequence derived from alignment at H-paniculata_contig18210:4004..4641- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |