mRNA_H-paniculata_contig18207.4427.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig18207.4427.1
Unique NamemRNA_H-paniculata_contig18207.4427.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig18207.4427.1 vs. uniprot
Match: A0A6H5KSK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSK1_9PHAE)

HSP 1 Score: 330 bits (846), Expect = 1.290e-105
Identity = 193/343 (56.27%), Postives = 230/343 (67.06%), Query Frame = 1 
Query:    1 MSITSNGYVCVPRCVDERALCALRLEANHLFRLKKAQDSLSEDEYFDKGCALDFFTNTELPEEHEARLSMDAYMSERNRARLPRGPKDNRNISNPCDKA------REATKRNSETSAAV--TIPSNELTTWDDRHVSVVREVIFGTLARLAWEALRSADEFSAARSQKAQESAAVVGARPRGTAGKEELRRPLLFNEQYVVKPPQSSIEFGWHTASGPAWYLWSQDEREQLAMCVFAPGVQPPVYVSVWLALDDCDAANGCLEVYPQACDGRHQQPPGKEDGA-VQCLPSNSGDAVVFLSNVWHRSGPNRT----------YSTDVVRATPSDPRPLSLAVPC 972
            M+I+++G+V V  CV++ AL ALR EA+ LF LK+++D+L+EDEY  KGCALDFFTN ELPE+ EAR SM  YMS RN  R  R P  N ++    +KA      R A++ +S T + +  T PS     W +RH+SVVR+ IFGTLA LAW+AL+      A RS  A E  A+      G   + EL   LLFNEQYVVKPP+SSIEFGWHT           DEREQLAMCVFAPG  PPVYVSVWLALDDCDA NGCLEVYPQA +   QQ P +ED A V CLP+ +GDAVVFLSN+WHRSGPN+T          Y  D +RA PSDPRPLSLAVPC
Sbjct:    1 MAISTDGFVFVGDCVEDEALQALRTEADALFNLKRSEDALTEDEYLQKGCALDFFTNNELPEDDEARTSMAKYMSRRNGRRRRRTPGGN-DLHPSVEKAPPPGDSRGASRDSSGTMSGLSTTSPSCGGGGWTERHLSVVRDTIFGTLAALAWDALK------AERSAAADEDDALRNPDASGAGDRGEL---LLFNEQYVVKPPRSSIEFGWHT-----------DEREQLAMCVFAPGAGPPVYVSVWLALDDCDAVNGCLEVYPQARNQTRQQTPSEEDDASVVCLPAKAGDAVVFLSNLWHRSGPNQTDNPRRVFYAQYCLDAIRAAPSDPRPLSLAVPC 322
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BLAST of mRNA_H-paniculata_contig18207.4427.1 vs. uniprot
Match: D7FYI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYI7_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 3.280e-47
Identity = 108/214 (50.47%), Postives = 136/214 (63.55%), Query Frame = 1 
Query:    1 MSITSNGYVCVPRCVDERALCALRLEANHLFRLKKAQDSLSEDEYFDKGCALDFFTNTELPEEHEARLSMDAYMSERNRARLPRGPKDNRNISNPCDKA------REATKRNSETSAAV--TIPSNELTTWDDRHVSVVREVIFGTLARLAWEALRSADEFSAARSQKAQESAAVVGARPRGTAGKEELRRPLLFNEQYVVKPPQSSIEFGWHT 618
            M+I S+G+V V  CV++  L ALR EA+ LF LK+++D+L+EDEY +KGCALDFFTN ELPE+ EAR SM  YMS RN  R  R P  N +I    +KA      R A++    T + +  T PS     W +RH+SVVR+ IFGTLA LAW+AL  A+  +AA  + A  +    GA  RG          LLFNEQYVVKPP+SSIEFGWHT
Sbjct:    1 MAIASDGFVFVAGCVEDETLQALRTEADALFNLKRSEDALTEDEYLEKGCALDFFTNNELPEDDEARTSMAKYMSRRNGRRRRRFPGGN-DIHPSVEKAPPPGDSRGASRDGGGTMSGLSTTSPSCGGGGWTERHLSVVRDTIFGTLAALAWDALE-AERSAAADEEDAVRNPDASGAGERGGL--------LLFNEQYVVKPPRSSIEFGWHT 204
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BLAST of mRNA_H-paniculata_contig18207.4427.1 vs. uniprot
Match: D7FYI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYI8_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 3.990e-42
Identity = 78/111 (70.27%), Postives = 85/111 (76.58%), Query Frame = 1 
Query:  673 MCVFAPGVQPPVYVSVWLALDDCDAANGCLEVYPQACDGRHQQPPGKEDGA-VQCLPSNSGDAVVFLSNVWHRSGPNRT----------YSTDVVRATPSDPRPLSLAVPC 972
            MCVFAPG +PPVYVSVWLALDDCDA NGCLEVYPQA D   QQ P +ED A V CLP+ +GDAVVFLSN+WHRSGPN+T          Y  D +RA PSDPRPLSLAVPC
Sbjct:    1 MCVFAPGARPPVYVSVWLALDDCDAVNGCLEVYPQARDQTRQQTPSEEDDACVVCLPAKAGDAVVFLSNLWHRSGPNQTDNPRRVFYAQYCLDAIRAAPSDPRPLSLAVPC 111
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BLAST of mRNA_H-paniculata_contig18207.4427.1 vs. uniprot
Match: A0A836CGX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGX5_9STRA)

HSP 1 Score: 128 bits (322), Expect = 3.120e-29
Identity = 113/341 (33.14%), Postives = 147/341 (43.11%), Query Frame = 1 
Query:    4 SITSNGYVCVPRCVDERALCALRLEANHLFRLKKAQDSLSEDEYFDK-GCALDFFTNTELPEEHEARLSMDAYMSERNRARLPRGPKDNRNISNPCDKAREATKRNSETSAAVTIPSNELTTWDDRHVSVVREVIFGTLARLAWEALRSADEFSAARSQKAQESAAVVGARPRGTAGKEELRRPLLFNEQYVVKPPQSSIEFGWHTASGPAWYLWSQDEREQLAMCVFAPGVQPPV--YVSVWLALDDCDAANGCLEVYPQACDGRHQQPPGKEDGAVQ-----CLPSNSGDAVVFLSNVWHRSGPNRT----------YSTDVVRATPSDPRPLSLAVPC 972
            S+   GYV +P  ++E AL ALRLE++ LF       +L   E F+   CALDFF+  +LP+ H AR++   Y              D R      D  RE                         H S+V +V+F           R   E   + +Q                A   + R+ +LFNEQY+ KPP+S++ F WH           +D  EQLAM +     Q P   Y SVW+ALDD  A NGCL V P A    H  P  ++DGA        LP  +GDAV F S++WH SGPN T          YS   + A  S   PLS AVPC
Sbjct:   11 SLEQQGYVVIPAVLNEAALAALRLESDTLF------STLHRPEEFEACSCALDFFSECDLPDTHSARVNASKYQ-------------DLRWSRCGVDFGRE-------------------------HKSLVADVLF-----------RQLPELLLSLTQXXXXXXXXXXXXXXREAPAPQQRQLVLFNEQYICKPPRSAVNFRWH-----------RDADEQLAMVLATAPHQAPALHYYSVWVALDDAAADNGCLVVLP-ASSSAHAAP--EQDGAAADAEAVALPVRAGDAVAFTSDLWHCSGPNVTRRARRAFYAQYSAAPIMAGGS---PLSFAVPC 279
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BLAST of mRNA_H-paniculata_contig18207.4427.1 vs. uniprot
Match: A0A662YDX4_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YDX4_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.950e-22
Identity = 61/160 (38.12%), Postives = 79/160 (49.38%), Query Frame = 1 
Query:  526 AGKEELRRPLLFNEQYVVKPPQSSIEFGWHTASGPAWYLWSQDEREQLAMCVFAPGVQPPVYVSVWLALDDCDAANGCLEVYPQAC-DGRHQQPPGKEDGAVQCLPSNSGDAVVFLSNVWHRSGPNRT----------YSTDVVRATPSDPRPLSLAVPC 972
            A   +      FNE YVVKPPQS +EF WH           +D+ EQL MC+    + P  YVS W ALDD    NG L+    A  D  ++     +  A   L + +GD + FLSNVWH S  N +          YS+  + A P+DP PLS A+PC
Sbjct:   64 ASSSDASETCFFNEHYVVKPPQSHVEFRWH-----------RDDDEQLGMCLHRDALPP--YVSAWCALDDVTTVNGALQFASLAASDSENESVESLQRRASPPLSTQAGDVLFFLSNVWHCSSSNESDAPRRAFYAQYSSGRITAGPNDPAPLSFAIPC 210
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BLAST of mRNA_H-paniculata_contig18207.4427.1 vs. uniprot
Match: A0A484EAQ3_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EAQ3_BRELC)

HSP 1 Score: 104 bits (260), Expect = 6.560e-22
Identity = 60/151 (39.74%), Postives = 78/151 (51.66%), Query Frame = 1 
Query:  556 LFNEQYVVKPPQSSIEFGWHTASGPAWYLWSQDEREQLAMCVFAPGVQPPVYVSVWLALDDCDAANGCLEVYPQACDGRHQQPPGK--EDGAVQCLPSNSGDAVVFLSNVWHRSGPNRT----------YSTDVVRATPSDPRPLSLAVPC 972
             FNE YVVKPPQS +EF WH           +D+ EQL MCV    + P  YVS W+ALDD    NG L+   +    R  +   +  +  A + + + SGD + FLSNVWH S  N T          YS + + A P+D  PLS A+PC
Sbjct:  124 FFNEHYVVKPPQSHVEFRWH-----------RDDDEQLGMCVHREALSP--YVSAWIALDDVTEENGALQFVSRGTSSRQNEENVEHLKMHASKPVTAKSGDVLFFLSNVWHFSSSNDTENARRAFYAQYSKETITARPNDSAPLSFAIPC 261
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BLAST of mRNA_H-paniculata_contig18207.4427.1 vs. uniprot
Match: A0A662X224_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X224_9STRA)

HSP 1 Score: 104 bits (259), Expect = 2.470e-21
Identity = 90/331 (27.19%), Postives = 135/331 (40.79%), Query Frame = 1 
Query:   13 SNGYVCVPRCVDERALCALRLEANHLFRLKKAQDSLSEDEYFDKGCALDFFTNTELPEEHEARLSMDAYMSERNRARLPRGPKDNRNISNPCDKAREATKRNSETSAAVTIPSNELTTWDDRHVSVVREVIFGTLARLAWEALRSADEFSAARSQKAQESAAVVGARPRGTAGKEELRRPLLFNEQYVVKPPQSSIEFGWHTASGPAWYLWSQDEREQLAMCVFAPGVQPPVYVSVWLALDDCDAANGCLEVYPQAC-DGRHQQPPGKEDGAVQCLPSNSGDAVVFLSNVWHRSGPNRT----------YSTDVVRATPSDPRPLSLAVPC 972
            ++G+VC    +    L  L+ E++ L+    A    +      +GC LD      +  +  AR++M  Y++ R                    +   AT   +ETS A   P ++          V+  ++F  L  +A + L ++   S A                              FNE YVVKPPQS +EF WH           +D+ EQL MC+    + P  YVS W ALDD  + NG L+    A  D  ++     +  A   L + +GD + FLSNVWH S  N +          YS+  + A P+ P PLS A+PC
Sbjct:   29 THGWVCFRAFLSRPELRFLQRESHSLYANTHADPEQAAAAVVRQGCVLDVLAQCPVHAD-PARVNMSRYLAAR------------------AKQITSATGCKTETSPAADAPGDD----------VLARLLFDRLPTVAAQLLATSAPSSGAA-------------------------ETCFFNEHYVVKPPQSHVEFRWH-----------RDDDEQLGMCLHRDALPP--YVSAWCALDDVTSVNGALQFASLAASDSENESVESLQRRASPPLNTQAGDVLFFLSNVWHCSSSNESDAPRRAFYAQYSSGRITAGPNGPAPLSFAIPC 292
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BLAST of mRNA_H-paniculata_contig18207.4427.1 vs. uniprot
Match: K3WJG0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJG0_GLOUD)

HSP 1 Score: 95.5 bits (236), Expect = 4.230e-18
Identity = 70/220 (31.82%), Postives = 102/220 (46.36%), Query Frame = 1 
Query:  373 DRHVSVVREVIFGTLARLAWEALRSADEFSAARSQKAQESAAVVGARPRGTAGKEELRRPLLFNEQYVVKPPQSSIEFGWHTASGPAWYLWSQDEREQLAMCVFAPGVQPPVYVSVWLALDDCDAANGCLEVYPQACDGRHQQPPGKE------DGAVQCLPSN-----SGDAVVFLSNVWHRSGPNRT----------YSTDVVRATPSDPRPLSLAVP 969
            ++H +++ +  +  L +L +E L S       +S  A+E +         T G + L   L FNE YVVKPPQ+++EF WH           +D+ EQL MCV    + P  Y+S W ALDD    NG L    Q+       P   E      + A+  + +      +G  V FLSNVWH S  N +          YS   + A+P++P PLS A+P
Sbjct:  144 EQHAALLTDENYSVLEKLLFERLPSFAAQLMTKSSDAEEDS---------TPGSQGL---LFFNEHYVVKPPQTAVEFRWH-----------RDDDEQLGMCVHRASIPP--YISAWCALDDVTLENGPLRFVSQSSLAVQSNPENGERDANESEDALDTMATAPILVPAGAVVFFLSNVWHCSSANESQATRRAFYAQYSQSKIIASPANPWPLSFAIP 338
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BLAST of mRNA_H-paniculata_contig18207.4427.1 vs. uniprot
Match: A0A024GC10_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GC10_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 3.000e-17
Identity = 58/161 (36.02%), Postives = 83/161 (51.55%), Query Frame = 1 
Query:  556 LFNEQYVVKPPQSSIEFGWHTASGPAWYLWSQDEREQLAMCVFAPGVQPPVYVSVWLALDDCDAANGCLEVYPQACDGRHQQPPGKED----GAVQCLPSNS--GDAVVFLSNVWHRSGPNRT----------YSTDVVRATPSDPRPLSLAVPCCLEALS 990
            LFN+ Y+VKPPQS  +FGWH           +D+ +QLAM      ++P  Y SVW ALD     NG +E+ P +      + P K D      +  +P++   G  V+F S+VWH S PN+T          YS D +  + S+  PLS A+PC ++ LS
Sbjct:  126 LFNDHYIVKPPQSDSKFGWH-----------RDDEKQLAMISSWASIRP--YFSVWCALDSITKENGAIELVPIS------KTPQKIDFDTLEQLSMIPASIDIGTIVIFRSDVWHASFPNQTDSCRRVYYVQYSLDPITCSQSESEPLSFAIPCTIQDLS 267
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BLAST of mRNA_H-paniculata_contig18207.4427.1 vs. uniprot
Match: A0A067BSU6_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BSU6_SAPPC)

HSP 1 Score: 89.4 bits (220), Expect = 1.960e-16
Identity = 57/155 (36.77%), Postives = 73/155 (47.10%), Query Frame = 1 
Query:  556 LFNEQYVVKPPQSSIEFGWHTASGPAWYLWSQDEREQLAMCVFAPGVQPPVYVSVWLALDDCDAANGCLEVYPQACDGRHQQPPGKED-------GAVQCLPSNSGDAVVFLSNVWHRSGPNRT----------YSTDVVRATPSDPRPLSLAVP 969
             FNE YVVKPP++++EF WH           QD+ EQL MCV    +  P Y+S W+ALDD  A NG L   P         P G ED        A   L   +G AVVF S++WH S  N T          Y+   + ++P    PL  A+P
Sbjct:  120 FFNEHYVVKPPETNVEFRWH-----------QDDAEQLGMCVHRSSI--PWYLSAWVALDDITATNGALRFLPWT-----HHPDGVEDPADLDLSAATAPLAVAAGAAVVFRSDIWHFSAVNATSTARRAFYAQYTPQPIYSSPRTIDPLCSAIP 256
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18207.4427.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A6H5KSK1_9PHAE1.290e-10556.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYI7_ECTSI3.280e-4750.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FYI8_ECTSI3.990e-4270.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CGX5_9STRA3.120e-2933.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A662YDX4_9STRA1.950e-2238.13Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A484EAQ3_BRELC6.560e-2239.74Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A662X224_9STRA2.470e-2127.19Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
K3WJG0_GLOUD4.230e-1831.82Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A024GC10_9STRA3.000e-1736.02Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A067BSU6_SAPPC1.960e-1636.77Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18207contigH-paniculata_contig18207:432..3755 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score123.6
Seed ortholog evalue2.2e-25
Seed eggNOG ortholog115417.EPrPW00000014635
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Phytanoyl-CoA dioxygenase. Source PGD
EggNOG OGs1MFTF@121069,2B580@1,2S0IH@2759
Ec32 ortholog descriptionPhytanoyl-CoA dioxygenase
Ec32 orthologEc-23_003040.1
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Exons6
Model size1317
Cds size1284
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929415.3669891-CDS-H-paniculata_contig18207:431..5751622929415.3669891-CDS-H-paniculata_contig18207:431..575Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18207 432..575 +
1691480851.6576717-CDS-H-paniculata_contig18207:431..5751691480851.6576717-CDS-H-paniculata_contig18207:431..575Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18207 432..575 +
1622929415.4171586-CDS-H-paniculata_contig18207:1391..18731622929415.4171586-CDS-H-paniculata_contig18207:1391..1873Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18207 1392..1873 +
1691480851.6704888-CDS-H-paniculata_contig18207:1391..18731691480851.6704888-CDS-H-paniculata_contig18207:1391..1873Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18207 1392..1873 +
1622929415.4328816-CDS-H-paniculata_contig18207:2231..23701622929415.4328816-CDS-H-paniculata_contig18207:2231..2370Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18207 2232..2370 +
1691480851.6870055-CDS-H-paniculata_contig18207:2231..23701691480851.6870055-CDS-H-paniculata_contig18207:2231..2370Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18207 2232..2370 +
1622929415.4458652-CDS-H-paniculata_contig18207:2732..28421622929415.4458652-CDS-H-paniculata_contig18207:2732..2842Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18207 2733..2842 +
1691480851.7011206-CDS-H-paniculata_contig18207:2732..28421691480851.7011206-CDS-H-paniculata_contig18207:2732..2842Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18207 2733..2842 +
1622929415.4632993-CDS-H-paniculata_contig18207:3283..33141622929415.4632993-CDS-H-paniculata_contig18207:3283..3314Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18207 3284..3314 +
1691480851.7128713-CDS-H-paniculata_contig18207:3283..33141691480851.7128713-CDS-H-paniculata_contig18207:3283..3314Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18207 3284..3314 +
1622929415.4772892-CDS-H-paniculata_contig18207:3344..37221622929415.4772892-CDS-H-paniculata_contig18207:3344..3722Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18207 3345..3722 +
1691480851.7223668-CDS-H-paniculata_contig18207:3344..37221691480851.7223668-CDS-H-paniculata_contig18207:3344..3722Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18207 3345..3722 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929415.489127-UTR-H-paniculata_contig18207:3722..37551622929415.489127-UTR-H-paniculata_contig18207:3722..3755Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig18207 3723..3755 +
1691480851.7311535-UTR-H-paniculata_contig18207:3722..37551691480851.7311535-UTR-H-paniculata_contig18207:3722..3755Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig18207 3723..3755 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18207.4427.1prot_H-paniculata_contig18207.4427.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig18207 432..3722 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig18207.4427.1

>prot_H-paniculata_contig18207.4427.1 ID=prot_H-paniculata_contig18207.4427.1|Name=mRNA_H-paniculata_contig18207.4427.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=428bp
MSITSNGYVCVPRCVDERALCALRLEANHLFRLKKAQDSLSEDEYFDKGC
ALDFFTNTELPEEHEARLSMDAYMSERNRARLPRGPKDNRNISNPCDKAR
EATKRNSETSAAVTIPSNELTTWDDRHVSVVREVIFGTLARLAWEALRSA
DEFSAARSQKAQESAAVVGARPRGTAGKEELRRPLLFNEQYVVKPPQSSI
EFGWHTASGPAWYLWSQDEREQLAMCVFAPGVQPPVYVSVWLALDDCDAA
NGCLEVYPQACDGRHQQPPGKEDGAVQCLPSNSGDAVVFLSNVWHRSGPN
RTYSTDVVRATPSDPRPLSLAVPCCLEALSSNNTAALCAAEQLEAPESQD
KTTVAVEGTAVDLCSAKARELEGAGVDTRSVPLRGAKRRCLKLEVDDKQT
EKSTRTRASSSKRVRETGNDVIDIERS*
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mRNA from alignment at H-paniculata_contig18207:432..3755+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig18207.4427.1 ID=mRNA_H-paniculata_contig18207.4427.1|Name=mRNA_H-paniculata_contig18207.4427.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3324bp|location=Sequence derived from alignment at H-paniculata_contig18207:432..3755+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGATAACGAGCAACGGTTACGTGTGCGTGCCGAGATGTGTTGACGA
AAGGGCACTTTGTGCCCTTCGTCTTGAGGCCAATCACTTGTTCCGCCTGA
AGAAAGCCCAAGATTCTCTCTCAGAAGACGAGTACTTTGACAAGGTCAGA
CTCACAGATATCCAAGTTGCTGGAGGGAGCGTGTCAGGTTTCGGTCACAG
GCACACTTGCACCCGAAACGCGACAGAAGTGTGACCCCATAATGATACGC
TTATCTGTCATCAGTAATGGTTCTATTCGGCGCAATAACCGTGATAGGTA
GGACCTCTGCCAGCCAAGGCTGCGTGTACCGATATTTTGGTAGTACCAAA
GCCATCAAGCTACAAACCTGCGAGCACACATACCCTAGATTCTCTATGCG
ATTCTCATCATTTCACCTCGTAATCAACCATTTTTCAGACATGATAATGC
GACAGATTTGATAGATAAGTGGGTGGTCGTCTTTGCGTGTAATTAATGGA
CCACTTGACTTCAGTTAAAAGTAAGGGCGCGAACTTACTTAATAGTGCAG
TCGTGTGTCCCCGAAAAAGCAGGTCAGGGCCGTTGTGAACGAGGCCGGTT
TTTGTCCGGCTTTTCTCGTTTTTCTGTTTTCCTAAAATTGGAAATCATCA
TAGCAAGCTCGTAATTGAGGGAAAGTTGCAGAAACATGTGCATCACATTG
CCCTCACACATCTGATGCACTTTGGTCACAGTCAAGCGTTCAGCTCACTA
TCGCGATTTCCACTTTTTGGAAAAAGGAAACACGGAATAAATCGGACAAA
GAATAGACTCATTTCCAACACGCCTCAGAACCTAGGTGTGTCGGTTTGCC
TAGGTGCGCTGGTAATATGTCTGTACCTCAACCTAACATCTTCCCAGATT
TTTTTTGGCACAGTGCATGACCTGACTCTGTCTGACGCCGTAAAATGTAT
GTCGGAGCAGGGATGCGCTTTGGACTTTTTCACGAACACCGAGCTACCGG
AAGAACACGAAGCACGACTGTCAATGGACGCGTACATGTCTGAGCGAAAC
CGCGCCAGACTACCACGCGGTCCAAAAGATAATAGGAACATCAGTAATCC
ATGTGATAAGGCACGGGAAGCTACCAAGCGAAATAGCGAAACTTCCGCTG
CTGTCACTATTCCTAGTAACGAGTTGACGACATGGGACGACCGTCATGTG
TCGGTTGTGCGAGAGGTCATATTCGGGACGCTAGCAAGACTTGCTTGGGA
AGCCTTGAGATCGGCCGATGAATTTTCCGCTGCACGAAGCCAGAAGGCGC
AGGAATCAGCAGCAGTCGTGGGAGCGAGGCCAAGGGGGACCGCGGGAAAA
GAGGAGCTCAGGAGGCCGTTACTGTTCAACGAGCAATACGTGGTGAAACC
GCCGCAGAGCTCCATCGAGTTCGGATGGCACACGGCAAGTGGGTCTTGGT
AGCGTGGTGCATCCGTCGTAGCGCGGCGCTGATGCACCCTACTCGATGCG
TGCGCAAAGCACGTCGGCTTTTTGGTGAATTGTCTTGTCGAGGATGACTT
TAAACAATTACCACTATCTCCCAGGCTCTGAACACCCTAGTTCAGGTGGA
TTGAGACCGTACGGATCAGAAGCGACTTTTGCTGCTTGGGCATGACCAGC
AGGGCTGGTAGTAAATGCTCCGTTTCTTTCCTGGGGGGCATGCTCTGCAC
GTACGTGTCATAGATTCTGGTTCCAGGCAATGCGATTGCTATCGATAACT
CGTAGCAACGCAACTGCGGGTTATTTCGCGGCAGCCACCTCTTAGTCAAG
TCCTGCTTGGTATCTGTGGTCGCAGGATGAACGAGAGCAACTCGCGATGT
GCGTTTTCGCACCAGGTGTGCAGCCTCCGGTATACGTCAGCGTATGGCTC
GCCCTGGACGACTGTGACGCCGCCAATGGCTGCCTGGAGGTATTGTACAC
AGTTTTCAGGTTGCCTCGTACAAATACCTGTGTTTAACCAGTTTCCCTGA
CCTACTATACCTTCACGATGACCCCCGTACTATCGAGGTCATCTGTATTA
GGCAGTTTTTTATATGCAGGTGTTTACATGGATAGCTGTCCCCCCAGCGT
TCGGTATCGATGCAACCTTACACACCTGCCAAAGCGAAATCGCGGCAGTC
GCCCAAGTAGGTTTTTCAATTTCGCCGCTCTGAGCGAAACAAAATCACAT
AGACTGGGCAGCAAGGACAGCGCACATGCATTCAAGTTATGTCTGAGGGG
CGCGGTTGTTTGATAGCTCTCTGATCGCAGGTTTATTTTGCTCATGGCTA
GGTTTACCCTCAAGCGTGTGACGGACGGCACCAGCAACCTCCCGGCAAGG
AAGACGGTGCAGTACAATGCCTTCCATCCAATTCAGGAGACGCCGTCGTC
TTCTTATCCAAGTAAGTTACGCTTTGCCCTTTTATCCGGGTTTCAGCGAA
TTCTTTGTCGATTTGACACTGACAGCAGTCAGAGCTCACGCCATCCTGCT
GAACTATATAGAATTATGCTGATTGAAGGAGTTTGGTTTTCTGTTCTTCG
ATTCGGAGAGTTTGTACACGGCAACCGCCGCATTTGAATTTTTCCTTCGA
ATGAAATGGTTGCGGTACACAAACTCTTCAAGAAATTGGAGTATGGAAAA
CCAGGTTCGCCTGTTCAGCACGGCCCCTATATGAAAGGCATTACTACAAG
CAATGTTTCTTTGTGCATAGCACTAGGGGTTGCGAGATCGAGCGTCGGTG
GGCAAACTACCCTAGGTATTTATGTCCTGCGATAGTTCTCCCCGCCTATC
TTTAATGCTACTGATGCTGCCTTCTTGACTTTCGCAAAATGACACGGCAT
AGCGTATGGCATCGAAGTGGACCCAACCGCACGGCCAACCCCAGACGAGT
GTTCTACGCTCAGTACAGCACCGACGTCGTCCGGGCTACCCCGTCCGACC
CACGTCCTCTCAGCCTGGCGGTACCATGCTGCCTTGAAGCGCTTTCATCA
AACAATACCGCGGCCCTGTGTGCTGCTGAGCAGCTTGAGGCGCCCGAATC
TCAAGATAAGACCACGGTGGCGGTGGAAGGAACCGCTGTAGATCTGTGTT
CTGCAAAGGCACGAGAACTGGAGGGTGCAGGGGTTGACACGCGAAGTGTG
CCGCTTCGTGGCGCGAAGCGAAGGTGTCTAAAGCTGGAAGTTGACGACAA
ACAGACGGAAAAATCGACACGCACAAGAGCAAGCAGCAGTAAGCGGGTTC
GCGAGACGGGAAACGACGTGATAGATATAGAGAGATCGTGAACTGGGGAA
GTGGTGGTACTCTTGATGGCTGTG
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Coding sequence (CDS) from alignment at H-paniculata_contig18207:432..3755+

>mRNA_H-paniculata_contig18207.4427.1 ID=mRNA_H-paniculata_contig18207.4427.1|Name=mRNA_H-paniculata_contig18207.4427.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2568bp|location=Sequence derived from alignment at H-paniculata_contig18207:432..3755+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGATAACGAGCAACGGTTACGTGTGCGTGCCGAGATGTGTTGACGA
AAGGGCACTTTGTGCCCTTCGTCTTGAGGCCAATCACTTGTTCCGCCTGA
AGAAAGCCCAAGATTCTCTCTCAGAAGACGAGTACTTTGACAAGATGTCG
ATAACGAGCAACGGTTACGTGTGCGTGCCGAGATGTGTTGACGAAAGGGC
ACTTTGTGCCCTTCGTCTTGAGGCCAATCACTTGTTCCGCCTGAAGAAAG
CCCAAGATTCTCTCTCAGAAGACGAGTACTTTGACAAGGGATGCGCTTTG
GACTTTTTCACGAACACCGAGCTACCGGAAGAACACGAAGCACGACTGTC
AATGGACGCGTACATGTCTGAGCGAAACCGCGCCAGACTACCACGCGGTC
CAAAAGATAATAGGAACATCAGTAATCCATGTGATAAGGCACGGGAAGCT
ACCAAGCGAAATAGCGAAACTTCCGCTGCTGTCACTATTCCTAGTAACGA
GTTGACGACATGGGACGACCGTCATGTGTCGGTTGTGCGAGAGGTCATAT
TCGGGACGCTAGCAAGACTTGCTTGGGAAGCCTTGAGATCGGCCGATGAA
TTTTCCGCTGCACGAAGCCAGAAGGCGCAGGAATCAGCAGCAGTCGTGGG
AGCGAGGCCAAGGGGGACCGCGGGAAAAGAGGAGCTCAGGAGGCCGTTAC
TGTTCAACGAGCAATACGTGGTGAAACCGCCGCAGAGCTCCATCGAGTTC
GGATGGCACACGGCAAGTGGGGATGCGCTTTGGACTTTTTCACGAACACC
GAGCTACCGGAAGAACACGAAGCACGACTGTCAATGGACGCGTACATGTC
TGAGCGAAACCGCGCCAGACTACCACGCGGTCCAAAAGATAATAGGAACA
TCAGTAATCCATGTGATAAGGCACGGGAAGCTACCAAGCGAAATAGCGAA
ACTTCCGCTGCTGTCACTATTCCTAGTAACGAGTTGACGACATGGGACGA
CCGTCATGTGTCGGTTGTGCGAGAGGTCATATTCGGGACGCTAGCAAGAC
TTGCTTGGGAAGCCTTGAGATCGGCCGATGAATTTTCCGCTGCACGAAGC
CAGAAGGCGCAGGAATCAGCAGCAGTCGTGGGAGCGAGGCCAAGGGGGAC
CGCGGGAAAAGAGGAGCTCAGGAGGCCGTTACTGTTCAACGAGCAATACG
TGGTGAAACCGCCGCAGAGCTCCATCGAGTTCGGATGGCACACGGCAAGT
GGTCCTGCTTGGTATCTGTGGTCGCAGGATGAACGAGAGCAACTCGCGAT
GTGCGTTTTCGCACCAGGTGTGCAGCCTCCGGTATACGTCAGCGTATGGC
TCGCCCTGGACGACTGTGACGCCGCCAATGGCTGCCTGGAGTCCTGCTTG
GTATCTGTGGTCGCAGGATGAACGAGAGCAACTCGCGATGTGCGTTTTCG
CACCAGGTGTGCAGCCTCCGGTATACGTCAGCGTATGGCTCGCCCTGGAC
GACTGTGACGCCGCCAATGGCTGCCTGGAGGTTTACCCTCAAGCGTGTGA
CGGACGGCACCAGCAACCTCCCGGCAAGGAAGACGGTGCAGTACAATGCC
TTCCATCCAATTCAGGAGACGCCGTCGTCTTCTTATCCAAGTTTACCCTC
AAGCGTGTGACGGACGGCACCAGCAACCTCCCGGCAAGGAAGACGGTGCA
GTACAATGCCTTCCATCCAATTCAGGAGACGCCGTCGTCTTCTTATCCAA
CGTATGGCATCGAAGTGGACCCAACCGCACGCGTATGGCATCGAAGTGGA
CCCAACCGCACGTACAGCACCGACGTCGTCCGGGCTACCCCGTCCGACCC
ACGTCCTCTCAGCCTGGCGGTACCATGCTGCCTTGAAGCGCTTTCATCAA
ACAATACCGCGGCCCTGTGTGCTGCTGAGCAGCTTGAGGCGCCCGAATCT
CAAGATAAGACCACGGTGGCGGTGGAAGGAACCGCTGTAGATCTGTGTTC
TGCAAAGGCACGAGAACTGGAGGGTGCAGGGGTTGACACGCGAAGTGTGC
CGCTTCGTGGCGCGAAGCGAAGGTGTCTAAAGCTGGAAGTTGACGACAAA
CAGACGGAAAAATCGACACGCACAAGAGCAAGCAGCAGTAAGCGGGTTCG
CGAGACGGGAAACGACGTGATAGATATAGAGAGATCGTGATACAGCACCG
ACGTCGTCCGGGCTACCCCGTCCGACCCACGTCCTCTCAGCCTGGCGGTA
CCATGCTGCCTTGAAGCGCTTTCATCAAACAATACCGCGGCCCTGTGTGC
TGCTGAGCAGCTTGAGGCGCCCGAATCTCAAGATAAGACCACGGTGGCGG
TGGAAGGAACCGCTGTAGATCTGTGTTCTGCAAAGGCACGAGAACTGGAG
GGTGCAGGGGTTGACACGCGAAGTGTGCCGCTTCGTGGCGCGAAGCGAAG
GTGTCTAAAGCTGGAAGTTGACGACAAACAGACGGAAAAATCGACACGCA
CAAGAGCAAGCAGCAGTAAGCGGGTTCGCGAGACGGGAAACGACGTGATA
GATATAGAGAGATCGTGA
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