mRNA_H-paniculata_contig1819.4421.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig1819.4421.1 vs. uniprot
Match: D7G910_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G910_ECTSI) HSP 1 Score: 132 bits (333), Expect = 1.160e-36 Identity = 65/135 (48.15%), Postives = 81/135 (60.00%), Query Frame = 1
Query: 1 MTRYLLLVIAYLLGMAICCNASRGRIGLNGRGGWVRKPVAHGVFGGGIPSAEPHLLEFHGANCDHCEAMVPLIEKVRKMFNIKIKRYMVWENTKAFHYMSVLDSDTGCKGLPFFYNRRTRQTICGATTWDNFRKW 405
M RYL +V + +C + G G + R P+A G G EPHLLEFHG CDHCEAM PL ++ + +KR+MVWE+T F MS+ D + C+GLPFFYNRRT QTICGATTW NF+ W
Sbjct: 1 MQRYLSVV-----ALLLCLLTTSGTRGSSSARKISRTPMAVGALSGLRIGLEPHLLEFHGEQCDHCEAMKPLFRRLFLETRLVVKRHMVWEDTANFRLMSIYDLKSRCRGLPFFYNRRTGQTICGATTWSNFKNW 130
BLAST of mRNA_H-paniculata_contig1819.4421.1 vs. uniprot
Match: A9BL77_HEMAN (Uncharacterized protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A9BL77_HEMAN) HSP 1 Score: 99.4 bits (246), Expect = 4.480e-24 Identity = 41/87 (47.13%), Postives = 55/87 (63.22%), Query Frame = 1
Query: 145 PSAEPHLLEFHGANCDHCEAMVPLIEKVRKMFNIKIKRYMVWENTKAFHYMSVLDSDTGCKGLPFFYNRRTRQTICGATTWDNFRKW 405
P + HLLEF+G CDHC M PL+ ++ + NI I+R+ VW NT+ + LD C G+PFFYN++TR ICGATT N + W
Sbjct: 4 PKKQSHLLEFYGIECDHCVDMEPLMSEIEEELNIPIRRFEVWYNTENARLLQKLDKGGACGGVPFFYNKKTRSWICGATTAPNLKAW 90
BLAST of mRNA_H-paniculata_contig1819.4421.1 vs. uniprot
Match: M2W7T7_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W7T7_GALSU) HSP 1 Score: 99.4 bits (246), Expect = 1.720e-23 Identity = 41/84 (48.81%), Postives = 54/84 (64.29%), Query Frame = 1
Query: 154 EPHLLEFHGANCDHCEAMVPLIEKVRKMFNIKIKRYMVWENTKAFHYMSVLDSDTGCKGLPFFYNRRTRQTICGATTWDNFRKW 405
EP+LLEFHG CDHC M+PL+ K+ K + + + VW N + + LDS + C G+PFFYNR +RQ ICGATT+ N W
Sbjct: 12 EPYLLEFHGTECDHCVDMLPLVHKIEKELGVTMLKLEVWHNPRNNRLLQKLDSSSVCGGVPFFYNRISRQFICGATTYKNLLSW 95
BLAST of mRNA_H-paniculata_contig1819.4421.1 vs. uniprot
Match: Q9AW19_GUITH (Uncharacterized protein n=1 Tax=Guillardia theta TaxID=55529 RepID=Q9AW19_GUITH) HSP 1 Score: 95.9 bits (237), Expect = 1.020e-22 Identity = 38/82 (46.34%), Postives = 53/82 (64.63%), Query Frame = 1
Query: 160 HLLEFHGANCDHCEAMVPLIEKVRKMFNIKIKRYMVWENTKAFHYMSVLDSDTGCKGLPFFYNRRTRQTICGATTWDNFRKW 405
HL+EF+G CDHC M PL+E++ + + I+RY VW N + + LD C G+PFFYN++TR ICGATT+ N + W
Sbjct: 9 HLIEFYGIECDHCVDMEPLMEQIERDTGLPIRRYEVWYNEENLRLLQKLDKGGSCGGVPFFYNKKTRSWICGATTYPNLKAW 90
BLAST of mRNA_H-paniculata_contig1819.4421.1 vs. uniprot
Match: M1UWJ6_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1UWJ6_CYAM1) HSP 1 Score: 97.1 bits (240), Expect = 1.330e-22 Identity = 41/92 (44.57%), Postives = 59/92 (64.13%), Query Frame = 1
Query: 142 IPSAE----PHLLEFHGANCDHCEAMVPLIEKVRKMFNIKIKRYMVWENTKAFHYMSVLDSDTGCKGLPFFYNRRTRQTICGATTWDNFRKW 405
+PS E HLLEF+G CDHC M PL+E+++K + I+R+ VW + + LD + C G+PFFYN+RT+ ICGATT++N + W
Sbjct: 1 MPSKELASRSHLLEFYGIECDHCVDMEPLMERLQKELGVPIRRFEVWYSDDNLRLLQKLDKNGSCGGVPFFYNKRTKGWICGATTYENLKNW 92
BLAST of mRNA_H-paniculata_contig1819.4421.1 vs. uniprot
Match: A0A7S0LX73_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LX73_9CRYP) HSP 1 Score: 95.5 bits (236), Expect = 1.480e-22 Identity = 38/82 (46.34%), Postives = 53/82 (64.63%), Query Frame = 1
Query: 160 HLLEFHGANCDHCEAMVPLIEKVRKMFNIKIKRYMVWENTKAFHYMSVLDSDTGCKGLPFFYNRRTRQTICGATTWDNFRKW 405
HLLEF+G CDHC M PL++++ K + I+R+ VW N + + LD C G+PFFYN++TR ICGATT+ N + W
Sbjct: 9 HLLEFYGIECDHCVDMEPLMDQIEKESGLPIRRFEVWYNEENIRLLQKLDKGGACGGVPFFYNKKTRSWICGATTYPNLKAW 90
BLAST of mRNA_H-paniculata_contig1819.4421.1 vs. uniprot
Match: A0A7J7IL75_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IL75_9RHOD) HSP 1 Score: 96.7 bits (239), Expect = 2.020e-22 Identity = 38/82 (46.34%), Postives = 55/82 (67.07%), Query Frame = 1
Query: 160 HLLEFHGANCDHCEAMVPLIEKVRKMFNIKIKRYMVWENTKAFHYMSVLDSDTGCKGLPFFYNRRTRQTICGATTWDNFRKW 405
HLLEF+G CDHC M PL+E+++K + I+R+ VW + + LD + C G+PFFYN+RT+ ICGATT++N + W
Sbjct: 11 HLLEFYGIECDHCVDMEPLMERLQKEIGLPIRRFEVWYSDDNLRLLQKLDKGSSCGGVPFFYNKRTKGWICGATTYENLKSW 92
BLAST of mRNA_H-paniculata_contig1819.4421.1 vs. uniprot
Match: J7G897_9CRYP (Uncharacterized protein n=1 Tax=Chroomonas mesostigmatica CCMP1168 TaxID=1195612 RepID=J7G897_9CRYP) HSP 1 Score: 93.6 bits (231), Expect = 1.310e-21 Identity = 39/87 (44.83%), Postives = 52/87 (59.77%), Query Frame = 1
Query: 145 PSAEPHLLEFHGANCDHCEAMVPLIEKVRKMFNIKIKRYMVWENTKAFHYMSVLDSDTGCKGLPFFYNRRTRQTICGATTWDNFRKW 405
P E HLLEF+G CDHC M PL ++V K I+R VW + + + +D + C G+PFFYN++TR ICGATT N + W
Sbjct: 4 PEKESHLLEFYGVECDHCVDMEPLADQVEKEIKFPIRRCEVWYSNENSELLQKIDRGSACGGVPFFYNKKTRSWICGATTLPNLKAW 90
BLAST of mRNA_H-paniculata_contig1819.4421.1 vs. uniprot
Match: A0A7S4BKL1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BKL1_CHRCT) HSP 1 Score: 90.1 bits (222), Expect = 1.150e-19 Identity = 37/83 (44.58%), Postives = 57/83 (68.67%), Query Frame = 1
Query: 157 PHLLEFHGANCDHCEAMVPLIEKVRKMFNIKIKRYMVWENTKAFHYMSVLDSDTGCKGLPFFYNRRTRQTICGATTWDNFRKW 405
PHLL+F G D+C M PL +++ + ++I+ + VW++TK + + D+ C G+PFFYN+RT++ ICGATT+DN RKW
Sbjct: 80 PHLLQFKGRGDDYCAMMEPLKDRLFEEHGVRIRCFEVWQDTKNLELLRIFDNGR-CGGVPFFYNKRTKRWICGATTYDNLRKW 161
BLAST of mRNA_H-paniculata_contig1819.4421.1 vs. uniprot
Match: F2HIC1_9CRYP (Uncharacterized protein n=1 Tax=Cryptomonas paramecium TaxID=2898 RepID=F2HIC1_9CRYP) HSP 1 Score: 87.4 bits (215), Expect = 2.040e-19 Identity = 34/82 (41.46%), Postives = 52/82 (63.41%), Query Frame = 1
Query: 160 HLLEFHGANCDHCEAMVPLIEKVRKMFNIKIKRYMVWENTKAFHYMSVLDSDTGCKGLPFFYNRRTRQTICGATTWDNFRKW 405
HL EF+G CDHC M L++++ K ++ ++R+ VW N + + D + C G+PFFYN++TR ICGATT+ N + W
Sbjct: 9 HLFEFYGIECDHCIEMEFLVDQLEKEISMPVRRFEVWYNDENVKLLQKFDKNGMCGGVPFFYNKKTRSWICGATTYPNLKAW 90 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1819.4421.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1819.4421.1 >prot_H-paniculata_contig1819.4421.1 ID=prot_H-paniculata_contig1819.4421.1|Name=mRNA_H-paniculata_contig1819.4421.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=136bp MTRYLLLVIAYLLGMAICCNASRGRIGLNGRGGWVRKPVAHGVFGGGIPSback to top mRNA from alignment at H-paniculata_contig1819:21411..24239+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1819.4421.1 ID=mRNA_H-paniculata_contig1819.4421.1|Name=mRNA_H-paniculata_contig1819.4421.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2829bp|location=Sequence derived from alignment at H-paniculata_contig1819:21411..24239+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1819:21411..24239+ >mRNA_H-paniculata_contig1819.4421.1 ID=mRNA_H-paniculata_contig1819.4421.1|Name=mRNA_H-paniculata_contig1819.4421.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=816bp|location=Sequence derived from alignment at H-paniculata_contig1819:21411..24239+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |