mRNA_H-paniculata_contig18189.4418.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig18189.4418.1 vs. uniprot
Match: D7G3H0_ECTSI (Globin, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3H0_ECTSI) HSP 1 Score: 246 bits (629), Expect = 2.310e-73 Identity = 119/182 (65.38%), Postives = 146/182 (80.22%), Query Frame = 1
Query: 1 QVNISHDDRENVLATLEGRPGAQALGSGLFDEALIQVENMLVLGPFPRFAESTVKNVENSWRMVVDRFSFEDAGASFYSELFNIAPEVEVLFKRTNRRQEEMLMGIVDTAVRLLSNLQELLPVLIQVGLRHNAYKVKAEHFPYVGDALMATLTVALGERFTPEIRQSWTVAYALMSNIMVSI 546
QVNISH+DRE+VLA LE RPGAQA+G+GLFDEAL+QVENMLVLGPFPRF TV+ V+ SW+ V+DRF F+D SFYS LF + P VE LF R+ R EMLM +VDT+VRLL+NLQEL+P L+Q+GLRHNAYKV+ EHFP VG+AL+ATL + L FT E++QSW Y L+SNIM+S+
Sbjct: 495 QVNISHEDREDVLAALENRPGAQAVGAGLFDEALVQVENMLVLGPFPRFVSVTVETVKTSWQKVLDRFGFQDIADSFYSVLFEVEPSVESLFTRSKRFHGEMLMRMVDTSVRLLNNLQELVPDLLQLGLRHNAYKVRKEHFPVVGEALIATLGLVLQNEFTDEVKQSWAAVYNLLSNIMISV 676
BLAST of mRNA_H-paniculata_contig18189.4418.1 vs. uniprot
Match: A0A6H5K1U5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1U5_9PHAE) HSP 1 Score: 229 bits (584), Expect = 6.170e-67 Identity = 116/202 (57.43%), Postives = 144/202 (71.29%), Query Frame = 1
Query: 1 QVNISHDDRENVLATLEGRPGAQALGSGLFDEALIQV--------------------ENMLVLGPFPRFAESTVKNVENSWRMVVDRFSFEDAGASFYSELFNIAPEVEVLFKRTNRRQEEMLMGIVDTAVRLLSNLQELLPVLIQVGLRHNAYKVKAEHFPYVGDALMATLTVALGERFTPEIRQSWTVAYALMSNIMVSI 546
QVNISH+DRE+VLA LE RPGAQA+G+GLFDEALIQV ENML+LGPFPRF T + V+ SW+ V+DRF F+D FYS LF + P VE LF R+ R EMLM +VDT+VRLL+NLQEL+P L+Q+GLRHNAYKV+ EHFP VG+AL+ATL + L FT E++QSW Y ++SNIM+S+
Sbjct: 486 QVNISHEDREDVLAALENRPGAQAVGAGLFDEALIQVATVGWSRPAGSVNPFIFVQVENMLILGPFPRFVSVTAETVKTSWQKVLDRFGFQDIADLFYSVLFEVEPSVESLFTRSKRFHGEMLMRMVDTSVRLLNNLQELVPDLLQLGLRHNAYKVRKEHFPVVGEALIATLGLVLQNEFTDEVKQSWAAVYKVLSNIMMSV 687
BLAST of mRNA_H-paniculata_contig18189.4418.1 vs. uniprot
Match: A0A7Y4U0B6_9DELT (Hemin receptor n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7Y4U0B6_9DELT) HSP 1 Score: 103 bits (258), Expect = 3.610e-25 Identity = 52/134 (38.81%), Postives = 82/134 (61.19%), Query Frame = 1
Query: 160 VKNVENSWRMVVDRFSFEDAGASFYSELFNIAPEVEVLFKRTNRRQEEMLMGIVDTAVRLLSNLQELLPVLIQVGLRHNAYKVKAEHFPYVGDALMATLTVALGERFTPEIRQSWTVAYALMSNIMVSIFPHES 561
++ V++SW V S A A FY LF + P ++ LF+ Q + LM ++ TAV+ L NL+ ++PVL +G RH Y VK EH+ VG AL+ TL LGE FTP+++++WT+ Y +M+++M+ H +
Sbjct: 6 IQLVQHSWAKVTPIAS--QAAALFYRNLFTLDPSLKSLFQGDMEEQGKRLMEMIGTAVQKLDNLETVVPVLRSLGKRHVRYGVKEEHYQTVGTALLTTLAQGLGEHFTPQVKEAWTLVYGVMADVMMKAAYHNA 137
BLAST of mRNA_H-paniculata_contig18189.4418.1 vs. uniprot
Match: UPI001444D429 (globin domain-containing protein n=1 Tax=Spongiibacter sp. KMU-166 TaxID=2721624 RepID=UPI001444D429) HSP 1 Score: 103 bits (256), Expect = 8.050e-25 Identity = 49/111 (44.14%), Postives = 73/111 (65.77%), Query Frame = 1
Query: 211 EDAGASFYSELFNIAPEVEVLFKRTNRRQEEMLMGIVDTAVRLLSNLQELLPVLIQVGLRHNAYKVKAEHFPYVGDALMATLTVALGERFTPEIRQSWTVAYALMSNIMVS 543
E A A FY +LF + P ++ +FK Q LM ++ TAVR L NL+ L+PV+ ++G+RH Y VK H+ VG AL+ TL LGE FTPE++++WTV Y ++S+ M++
Sbjct: 21 EQAAAIFYGKLFELDPSLKPMFKGDIEEQGRKLMTMLGTAVRSLDNLEGLVPVVQKLGVRHVGYGVKTSHYATVGTALLDTLAAGLGEDFTPEVKEAWTVVYGVLSSTMIA 131
BLAST of mRNA_H-paniculata_contig18189.4418.1 vs. uniprot
Match: UPI0019A6785A (Hemin receptor n=1 Tax=Candidatus Saccharibacteria bacterium TaxID=2026720 RepID=UPI0019A6785A) HSP 1 Score: 101 bits (251), Expect = 7.360e-24 Identity = 55/128 (42.97%), Postives = 79/128 (61.72%), Query Frame = 1
Query: 175 NSWRMVVDRFSFED-------AGASFYSELFNIAPEVEVLFKRTNRRQEEMLMGIVDTAVRLLSNLQELLPVLIQVGLRHNAYKVKAEHFPYVGDALMATLTVALGERFTPEIRQSWTVAYALMSNIM 537
N+ ++ + + SFED A FY LF P ++ LFK Q MLM ++ TAVR LS+L L+PVL +G RHN Y V+ EH+ VG L+ TL+ LG++FTPE+R +WT AY L++++M
Sbjct: 2 NADQIALVQSSFEDVRPIAEVAAELFYGRLFETDPMLKPLFKGEMANQGRMLMSVLSTAVRGLSDLDALVPVLRNLGARHNDYGVQEEHYVTVGTTLLWTLSQGLGDKFTPEVRTAWTDAYGLIADVM 129
BLAST of mRNA_H-paniculata_contig18189.4418.1 vs. uniprot
Match: UPI00146AFC23 (globin domain-containing protein n=1 Tax=Flavivirga algicola TaxID=2729136 RepID=UPI00146AFC23) HSP 1 Score: 98.2 bits (243), Expect = 6.400e-23 Identity = 47/111 (42.34%), Postives = 73/111 (65.77%), Query Frame = 1
Query: 217 AGASFYSELFNIAPEVEVLFKRTN---RRQEEMLMGIVDTAVRLLSNLQELLPVLIQVGLRHNAYKVKAEHFPYVGDALMATLTVALGERFTPEIRQSWTVAYALMSNIMV 540
A FY +LF++ P+++ LF ++ + Q LM ++ AV LSNL L+P+L +G RH YKV+A H+ VG+AL+ TL V LG+ FTP+++++WT Y MSN+M+
Sbjct: 23 AAKIFYEKLFDLDPQLKPLFPNSDDAMKEQGNKLMSMLGAAVAGLSNLDSLIPILKDLGKRHVEYKVEAFHYDTVGEALLGTLEVGLGDDFTPDVKEAWTTVYGTMSNVMI 133
BLAST of mRNA_H-paniculata_contig18189.4418.1 vs. uniprot
Match: UPI000C796937 (globin domain-containing protein n=1 Tax=Oceanicoccus sp. KOV_DT_Chl TaxID=1904639 RepID=UPI000C796937) HSP 1 Score: 98.2 bits (243), Expect = 6.760e-23 Identity = 45/111 (40.54%), Postives = 73/111 (65.77%), Query Frame = 1
Query: 211 EDAGASFYSELFNIAPEVEVLFKRTNRRQEEMLMGIVDTAVRLLSNLQELLPVLIQVGLRHNAYKVKAEHFPYVGDALMATLTVALGERFTPEIRQSWTVAYALMSNIMVS 543
+DA FY+ LF PE++ LFK Q + LM ++ AVR+L NL +L+P++ ++G+RH Y V A+H+ VG AL+ TL++ LG+ FT E+ +WT AY +++ M++
Sbjct: 21 DDAAVLFYNNLFEADPELKPLFKGNMVEQGKKLMQMITAAVRMLDNLDQLVPIVQKLGIRHAGYGVVADHYDTVGAALLKTLSMGLGDEFTEEVETAWTEAYGILAATMIA 131
BLAST of mRNA_H-paniculata_contig18189.4418.1 vs. uniprot
Match: A0A2S0VMR3_9ALTE (Hemin receptor n=1 Tax=Saccharobesus litoralis TaxID=2172099 RepID=A0A2S0VMR3_9ALTE) HSP 1 Score: 98.6 bits (244), Expect = 7.760e-23 Identity = 53/131 (40.46%), Postives = 84/131 (64.12%), Query Frame = 1
Query: 151 ESTVKNVENSWRMVVDRFSFEDAGASFYSELFNIAPEVEVLFKRTNRRQE-EMLMGIVDTAVRLLSNLQELLPVLIQVGLRHNAYKVKAEHFPYVGDALMATLTVALGERFTPEIRQSWTVAYALMSNIMV 540
E+ VK V+ S+ VV E A FY +LF IAP+V+ +FK T+ +++ + LM + AV LSNL+ ++PV+ Q+G++H Y VK EHFP V +AL+ TL LG+ + E++ +W AY +++N M+
Sbjct: 3 ENQVKLVQESFSKVVP--IAEQAAELFYGKLFEIAPQVKPMFKSTDMKEQGKKLMQTIGLAVNGLSNLESIVPVVQQLGVKHIDYGVKDEHFPIVAEALLWTLEQGLGDAWNEEVKGAWVEAYTVLANTMI 131
BLAST of mRNA_H-paniculata_contig18189.4418.1 vs. uniprot
Match: A0A661E4U5_9GAMM (Hemin receptor n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661E4U5_9GAMM) HSP 1 Score: 97.8 bits (242), Expect = 8.790e-23 Identity = 50/132 (37.88%), Postives = 85/132 (64.39%), Query Frame = 1
Query: 148 AESTVKNVENSWRMVVDRFSFEDAGAS-FYSELFNIAPEVEVLFKRTNRRQEEMLMGIVDTAVRLLSNLQELLPVLIQVGLRHNAYKVKAEHFPYVGDALMATLTVALGERFTPEIRQSWTVAYALMSNIMV 540
+E +K V+++W+M+V +D A FY +LF IAPEV LFK + Q L+ ++ V L++L++++P L ++G RH Y V+A+H+ V +AL+ TL LGE FT E++++WT+AY +++ M+
Sbjct: 2 SEHQIKLVQSTWQMIVP---VKDQTAELFYRKLFLIAPEVRPLFKGDIKEQGTKLVNSINLVVNSLTHLEQVVPALQELGRRHIDYGVEADHYDIVAEALLWTLEQGLGEDFTDEVKEAWTIAYTIIATTMI 130
BLAST of mRNA_H-paniculata_contig18189.4418.1 vs. uniprot
Match: A0A520G045_9BURK (Hemin receptor n=2 Tax=Variovorax sp. TaxID=1871043 RepID=A0A520G045_9BURK) HSP 1 Score: 97.8 bits (242), Expect = 1.010e-22 Identity = 52/128 (40.62%), Postives = 78/128 (60.94%), Query Frame = 1
Query: 160 VKNVENSWRMVVDRFSFEDAGASFYSELFNIAPEVEVLFKRTNRRQEEMLMGIVDTAVRLLSNLQELLPVLIQVGLRHNAYKVKAEHFPYVGDALMATLTVALGERFTPEIRQSWTVAYALMSNIMVS 543
++ V++S+ VV + A A FY+ LF +APEV LFK Q LM ++ + RLL+ L EL+P+ ++ RH AY + H+ VG AL+ TL LG FTPE+RQ+W AYA +S++M++
Sbjct: 6 IELVQSSFAKVVP--ISDQAAAIFYARLFELAPEVRALFKGDMVEQGRKLMTMLGSVTRLLTRLDELVPIAQRLAERHVAYGTQPAHYAVVGAALIDTLDKGLGAEFTPEVRQAWETAYATLSSVMIT 131 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18189.4418.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig18189.4418.1 >prot_H-paniculata_contig18189.4418.1 ID=prot_H-paniculata_contig18189.4418.1|Name=mRNA_H-paniculata_contig18189.4418.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=188bp QVNISHDDRENVLATLEGRPGAQALGSGLFDEALIQVENMLVLGPFPRFAback to top mRNA from alignment at H-paniculata_contig18189:498..5167- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig18189.4418.1 ID=mRNA_H-paniculata_contig18189.4418.1|Name=mRNA_H-paniculata_contig18189.4418.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4670bp|location=Sequence derived from alignment at H-paniculata_contig18189:498..5167- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig18189:498..5167- >mRNA_H-paniculata_contig18189.4418.1 ID=mRNA_H-paniculata_contig18189.4418.1|Name=mRNA_H-paniculata_contig18189.4418.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1128bp|location=Sequence derived from alignment at H-paniculata_contig18189:498..5167- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |