prot_H-paniculata_contig18186.4417.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig18186.4417.1
Unique Name	prot_H-paniculata_contig18186.4417.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	284

Homology

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BLAST of mRNA_H-paniculata_contig18186.4417.1 vs. uniprot
Match: D7G085_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G085_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 1.470e-92
Identity = 141/286 (49.30%), Postives = 181/286 (63.29%), Query Frame = 0

Query:    1 MAKGEESLPLT------GASNAVGHRDRRIMLGITAAFQILTFIFCLPALVPMWHSHYFSHSEIEQRAWTWFGMNSLWWSLPLLYVVFQPDNGPAAAAGCLLCAVFWAYLDIVMITQWARGILAWSAVGDFAIHTALCVFCTSAAWGGVASPVHASRSDGGNTRRRAFRKWVLVATSIQLFMAFVACWPMGHLSVIPPRVEREPAPWEWNSAVLFTLMLAVLWAAFLTRGGYVDQTKRAMCMWSAIVFSGWFVMSSFDWPYLGMIGHNLIISVVLAVDASVLFVAA 280
            MA  EE+LPL       G  N  GH  +++ LG T A+ ++  + C PA+VP+WH  Y++    EQR WTW G N+LW +L LL+ +   DNGP  A  CLLC+V W YL +V+++Q  RG L   A+ D  +H  + + C  AAW GVA     +RSDG +T RR  RKW LV+ S  LF AF+ C     L +IPP  ERE APWEWNSA+LF + LAVLWAAFLTRGG VD+TKRA C W A+ FSG FV+ SF W  LG+   ++  SVVLAV+ +VL  AA
Sbjct:    2 MAAPEETLPLRVSVNGDGPGNHDGHHGKKLALGATVAYLLVFALICFPAVVPLWHPTYYAELGAEQRGWTWLGANALWLALALLWTLLHLDNGPCVATACLLCSVLWFYLSLVLLSQACRGQLPLMAIADALVHLTMLIVCFRAAWVGVAKKSQKARSDGSSTWRRVLRKWALVSASATLFAAFLGCCS-SSLPLIPPVSERESAPWEWNSAILFAMTLAVLWAAFLTRGGLVDETKRAACAWIALSFSGSFVLCSFSWQALGLDARSVTTSVVLAVETAVLAAAA 286

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig18186.4417.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig18186.4417.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G085_ECTSI	1.470e-92	49.30	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 89..113
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 223..233
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 114..124
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 234..251
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..23
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 186..204
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 263..282
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 205..222
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 24..45
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 252..262
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 125..144
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 283..283
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 165..185
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 83..88
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 65..82
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 145..164
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 46..64
None	No IPR available	TMHMM	TMhelix		coord: 234..256
None	No IPR available	TMHMM	TMhelix		coord: 62..81
None	No IPR available	TMHMM	TMhelix		coord: 125..147
None	No IPR available	TMHMM	TMhelix		coord: 205..227
None	No IPR available	TMHMM	TMhelix		coord: 88..110
None	No IPR available	TMHMM	TMhelix		coord: 168..190
None	No IPR available	TMHMM	TMhelix		coord: 25..47
None	No IPR available	TMHMM	TMhelix		coord: 260..282

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig18186	contig	H-paniculata_contig18186:2603..3454 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig18186.4417.1	mRNA_H-paniculata_contig18186.4417.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig18186 2573..4785 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig18186.4417.1 ID=prot_H-paniculata_contig18186.4417.1|Name=mRNA_H-paniculata_contig18186.4417.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=284bp
MAKGEESLPLTGASNAVGHRDRRIMLGITAAFQILTFIFCLPALVPMWHS
HYFSHSEIEQRAWTWFGMNSLWWSLPLLYVVFQPDNGPAAAAGCLLCAVF
WAYLDIVMITQWARGILAWSAVGDFAIHTALCVFCTSAAWGGVASPVHAS
RSDGGNTRRRAFRKWVLVATSIQLFMAFVACWPMGHLSVIPPRVEREPAP
WEWNSAVLFTLMLAVLWAAFLTRGGYVDQTKRAMCMWSAIVFSGWFVMSS
FDWPYLGMIGHNLIISVVLAVDASVLFVAALLN*