prot_H-paniculata_contig18181.4416.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18181.4416.1
Unique Nameprot_H-paniculata_contig18181.4416.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length98
Homology
BLAST of mRNA_H-paniculata_contig18181.4416.1 vs. uniprot
Match: A0A6H5K4I2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4I2_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 1.500e-17
Identity = 40/71 (56.34%), Postives = 50/71 (70.42%), Query Frame = 0
Query:   28 RDREGDTLEISQTQCIRNVLVRFNVTKTSLIPAPPCVELTEENEEGTLVDVPFQEVIGSLMWITNQTRLDI 98
            RDRE  T+++SQ  C+R+VL RFN+ +TS IPA P  +     EE    DVPF+EV+GSLMWI NQTR DI
Sbjct:  202 RDREAGTIDMSQGSCVRSVLERFNICRTSSIPASPASDYRSVMEEEKAGDVPFREVVGSLMWIANQTRPDI 272          
BLAST of mRNA_H-paniculata_contig18181.4416.1 vs. uniprot
Match: A0A6H5JFT6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFT6_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 1.940e-17
Identity = 48/98 (48.98%), Postives = 59/98 (60.20%), Query Frame = 0
Query:    1 MVVIHVDDIQIAGSKDVASVVVGSLNDRDREGDTLEISQTQCIRNVLVRFNVTKTSLIPAPPCVELTEENEEGTLVDVPFQEVIGSLMWITNQTRLDI 98
            M+ IHVDDI            +G    RDRE  T+E+SQ   IR+VL +FNV +TS IPA P  +     E+    DVPF+EV+GSLMWI NQTR DI
Sbjct:  232 MIAIHVDDILF---------FLGCAFVRDREAGTIEMSQASYIRSVLEKFNVCRTSSIPASPANDYRSVMEDKGAGDVPFREVVGSLMWIPNQTRPDI 320          
BLAST of mRNA_H-paniculata_contig18181.4416.1 vs. uniprot
Match: A0A6H5JV18_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV18_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 2.150e-17
Identity = 40/71 (56.34%), Postives = 49/71 (69.01%), Query Frame = 0
Query:   28 RDREGDTLEISQTQCIRNVLVRFNVTKTSLIPAPPCVELTEENEEGTLVDVPFQEVIGSLMWITNQTRLDI 98
            RDRE  T+E+SQ  C+R+VL RFN+ +TS IPA P  +     EE    D PF+EV+GSLMWI NQTR DI
Sbjct:  200 RDREAGTIEMSQESCVRSVLERFNICRTSSIPASPASDYRSVIEEEKAGDAPFREVVGSLMWIANQTRPDI 270          
BLAST of mRNA_H-paniculata_contig18181.4416.1 vs. uniprot
Match: A0A6H5JNA7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNA7_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 2.230e-17
Identity = 41/77 (53.25%), Postives = 51/77 (66.23%), Query Frame = 0
Query:   22 VGSLNDRDREGDTLEISQTQCIRNVLVRFNVTKTSLIPAPPCVELTEENEEGTLVDVPFQEVIGSLMWITNQTRLDI 98
            +G   +RDRE  T+E+SQ  C+R VL RFN+ +TS IPA P  +     EE    D+PF+EV GSLMWI NQTR DI
Sbjct:  293 LGCAFNRDREARTIEMSQVSCVRRVLERFNICRTSPIPASPASDYRSVTEEEKAGDLPFREVAGSLMWIANQTRPDI 369          
BLAST of mRNA_H-paniculata_contig18181.4416.1 vs. uniprot
Match: A0A6H5J9U3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9U3_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 9.560e-17
Identity = 45/79 (56.96%), Postives = 52/79 (65.82%), Query Frame = 0
Query:   22 VGSLNDRDREGDTLEISQTQCIRNVLVRFNVTKTSLIPAPPCV--ELTEENEEGTLVDVPFQEVIGSLMWITNQTRLDI 98
            +G    RDRE  T+EISQ   IR+VL RFNV +TS IPA P V      ENEE    DVPF+EV+G LMWI +QTR DI
Sbjct:   22 LGCAYRRDREAGTIEISQESYIRSVLERFNVVRTSSIPASPTVVNRSVMENEEAG--DVPFREVVGCLMWIASQTRPDI 98          
BLAST of mRNA_H-paniculata_contig18181.4416.1 vs. uniprot
Match: A0A6H5KBM6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM6_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 1.340e-16
Identity = 42/71 (59.15%), Postives = 49/71 (69.01%), Query Frame = 0
Query:   28 RDREGDTLEISQTQCIRNVLVRFNVTKTSLIPAPPCVELTEENEEGTLVDVPFQEVIGSLMWITNQTRLDI 98
            RDRE  T+EISQ   IR+VL RFNV +TS IPA P  +     E+    DVPF+EV+GSLMWI NQTR DI
Sbjct:   55 RDREAGTIEISQESYIRSVLERFNVCRTSSIPASPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDI 125          
BLAST of mRNA_H-paniculata_contig18181.4416.1 vs. uniprot
Match: A0A6H5JQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQD0_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 5.630e-16
Identity = 41/71 (57.75%), Postives = 49/71 (69.01%), Query Frame = 0
Query:   28 RDREGDTLEISQTQCIRNVLVRFNVTKTSLIPAPPCVELTEENEEGTLVDVPFQEVIGSLMWITNQTRLDI 98
            RDRE  T+E+SQ   IR+VL RFNV +TS IPA P  +     E+    DVPF+EV+GSLMWI NQTR DI
Sbjct:  220 RDREAGTIEMSQESYIRSVLERFNVCRTSSIPASPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDI 290          
BLAST of mRNA_H-paniculata_contig18181.4416.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 7.620e-16
Identity = 41/71 (57.75%), Postives = 49/71 (69.01%), Query Frame = 0
Query:   28 RDREGDTLEISQTQCIRNVLVRFNVTKTSLIPAPPCVELTEENEEGTLVDVPFQEVIGSLMWITNQTRLDI 98
            RDRE  T+E+SQ   IR+VL RFNV +TS IPA P  +     E+    DVPF+EV+GSLMWI NQTR DI
Sbjct:  686 RDREAGTIEMSQESYIRSVLERFNVCRTSSIPASPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDI 756          
BLAST of mRNA_H-paniculata_contig18181.4416.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 7.710e-16
Identity = 41/71 (57.75%), Postives = 49/71 (69.01%), Query Frame = 0
Query:   28 RDREGDTLEISQTQCIRNVLVRFNVTKTSLIPAPPCVELTEENEEGTLVDVPFQEVIGSLMWITNQTRLDI 98
            RDRE  T+E+SQ   IR+VL RFNV +TS IPA P  +     E+    DVPF+EV+GSLMWI NQTR DI
Sbjct:  953 RDREAGTIEMSQESYIRSVLERFNVCRTSSIPASPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDI 1023          
BLAST of mRNA_H-paniculata_contig18181.4416.1 vs. uniprot
Match: A0A6H5J7G8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7G8_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 3.530e-15
Identity = 40/71 (56.34%), Postives = 48/71 (67.61%), Query Frame = 0
Query:   28 RDREGDTLEISQTQCIRNVLVRFNVTKTSLIPAPPCVELTEENEEGTLVDVPFQEVIGSLMWITNQTRLDI 98
            RDRE  T+E+SQ   IR+VL RFNV +TS IPA P  +     E+    DVPF+EV+GSLMWI NQ R DI
Sbjct:  370 RDREAGTIEMSQESYIRSVLERFNVCRTSSIPASPANDYRSVMEDEGAGDVPFREVVGSLMWIANQKRPDI 440          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18181.4416.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K4I2_9PHAE1.500e-1756.34Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JFT6_9PHAE1.940e-1748.98Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JV18_9PHAE2.150e-1756.34Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JNA7_9PHAE2.230e-1753.25Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5J9U3_9PHAE9.560e-1756.96Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KBM6_9PHAE1.340e-1659.15Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQD0_9PHAE5.630e-1657.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KKK1_9PHAE7.620e-1657.75Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JRL9_9PHAE7.710e-1657.75Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5J7G8_9PHAE3.530e-1556.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18181contigH-paniculata_contig18181:543..886 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18181.4416.1mRNA_H-paniculata_contig18181.4416.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18181 543..1048 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18181.4416.1 ID=prot_H-paniculata_contig18181.4416.1|Name=mRNA_H-paniculata_contig18181.4416.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=98bp
MVVIHVDDIQIAGSKDVASVVVGSLNDRDREGDTLEISQTQCIRNVLVRF
NVTKTSLIPAPPCVELTEENEEGTLVDVPFQEVIGSLMWITNQTRLDI
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