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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 893 |
| Cds size | 651 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1816.4408.1 >prot_H-paniculata_contig1816.4408.1 ID=prot_H-paniculata_contig1816.4408.1|Name=mRNA_H-paniculata_contig1816.4408.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=217bp
MASELRGLEGKLAATTSARDNLSRKLSDTTANLIHVKAKLAELSGRLDRM
ALESAKRDAAAGDSAALAAVEEARAETFKMQERTETAEEALATAKGKSVE
GHKEREQLRRELQGQAQAQGSLKKKLAEAQQGLAMAKGRVAAGCHECPRK
DREISDLQDTLSQVLANGCPPSNQTGEAAGGAGVAWSLREGSGSACSSGE
SRNQSENEKVCSCIRR* back to topmRNA from alignment at H-paniculata_contig1816:3035..5262- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1816.4408.1 ID=mRNA_H-paniculata_contig1816.4408.1|Name=mRNA_H-paniculata_contig1816.4408.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2228bp|location=Sequence derived from alignment at H-paniculata_contig1816:3035..5262- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTGGCGGGGTGGACGCCGCGGCAACTCGGCAGGTAGATGTAGAGGCG
TCGCGCAACGCCGTGCTTTCGTTGGACTCTGAGTTGGAAGAGAGCCAGCG
GGCGCGCGCTGCGACGAGCAAAGAGCTCGAAGCCGCGAAGGCTGCGGGCC
TGGCTATGGCGTCAGAGCTTCGCGGTCTTGAGGGTAAACTGGCGGCGACG
ACTTCCGCCCGCGATAATTTGAGCAGAAAGTTGTCGGATACGACGGCAAA
CCTGATTCACGTAAAGGCGAAGCTAGCGGAACTCAGCGGCCGACTCGAGG
AGCAGAAGGTAAGGACCGAGTCAGCGCTCGACAGCGCTTCCGATCTTCGG
ATGGCCCTTGAGTCTGCCAAGCGGGATGCTGCGGCTGGTGATTCCGCGGC
TCTCGCAGCCGTCGAGGAGGCGAGGGCGGAGACGTTCAAGATGCAAGAGC
GGACGGAGACCGCAGAAGAGGTGTGTGTCTATGTCTTTTTATTCATGTAT
CGTTTGATGGTGCGATAAGGGGGTGCGTTGTGACATTATCAAAATGAGAA
GTGAACGTCCATTGATTCGAGAATTAAACAAAAAGTTCGACGCTGGCATG
TTTTTGGAAGCACGCTCTCCTGAGTTTTCGAATGTTTTACGGGATCAATT
TGCTGTGCTGTATATGTTTTCTTTGGCTTGGTTCGTACTTGGAGCCGTGC
GGTTGCTTACAGAGTGTGTTTTCATTCGCAAATAGAGGGCGAGATATTGG
CACTCGTGGAGAACAGTGGCCTGTGTGGGAGAAGGGGTAGAGTGAAGCAA
TCGTGAGACGGCTCGTGTGTGCGTGTGGGCGACGTTGGCATAGCGCGTTT
TGGCCTCGAGCATTCGCGTACTGTGGTTTGCTTCCCTCGCGCAAAAACTC
GCGCCTGTCATATATTTCATGGTCGGCTCAGCAGGCCCTTGCTACGGCGA
AGGGCAAGAGCGTCGAGGGTCATAAGGAGCGGGAGCAGCTTAGAAGGGAG
CTTCAGGGGCAAGCGCAGGCACAAGGTTCTCTGAAGAAGAAATTGGCAGA
GGCCCAACAAGGCCTGGCTATGGCGAAGGGGAGGGTCGCCGCCGGTTGCC
ATGAATGTCCGAGGAAGGACAGAGAAATTTCGGACCTACAGGACACCCTT
TCGCAGGTGTGTCTTTGTGCATGCGTTGGGGGGGAAGGATAGGGGTGTGT
ATGTGTTGTGTACTAGCCGTTATGCAGTGACCATCGGTCGGTTTCTCGTG
TATGCGTATCTGAGTTAGTGGGACGTACGTACTTGGCAGAAGCCAAAAGT
ACAGAAGCCGAAAAGGATTATATCGATAAAGGAGAGGCGGAGGAACAAAT
GCGAGATGTACACTCGTTAGTATGGCTTCGGTGGGGGCATTTTTATGAGT
ATATAAGAGTTCTATCCTCTTACGGTCAAATCCACACAACTGTTGGATCA
TTTTCGTCCCTAGGGTGTAGGTACATGTTGAATGTATATATGACGACACT
TGGTATTCCACTTTCATCAAAAGTAGGTGCATTCGATGGCGCTATTGAAA
GGAGTAAACTTTCAAAGCTTACTCGTTATTCTGCGATCCGTCACATTGCG
CTGGTTGTACGTAGCTGAAGTTACTTTCGTCGGAAGACAAGCACGTTGGA
AATGATGCAATTGTTGACAGAAAGCACGCATGAACATGCTTAAGGAAGCT
GATCGAGATATCATGAAACCCTCGGTGATTCTGCAGCGTACGAATCAAGA
GTACAAGACGTCAGTGATAGATGGCACGGTGCGCGATATGAAAAAGTGAA
TGATGCCTATGCGAGAGTCGGTTCTTAGAGCAAGTAGTCGGACGAACGAT
TGATGGCGCACCAAGTGCGAACAGAGAAGAAGACGCGTCTTTTCTACCCC
TCAGTGTATGCCCTATATTCTCAATTCATGTGCATATCCATTTCGTGCGT
ATCTATTCTCGACTGACAACGCCGACCAGGTGCTCGCGAACGGGTGCCCG
CCAAGCAACCAGACGGGAGAGGCAGCAGGAGGAGCTGGGGTCGCTTGGAG
CCTGCGCGAGGGCTCGGGGTCAGCTTGTTCCTCTGGAGAGTCGAGGAACC
AGTCGGAAAATGAGAAGGTTTGTAGCTGCATCAGAAGGTGAACCGGGCGT
GATTAGAGTGGTTGTTGGGTACTTTGCAGGTGTTGGATCGGGTCGAACGG
CGTGTGCGGAGGGGTCGTTTCATGCGAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig1816:3035..5262- >mRNA_H-paniculata_contig1816.4408.1 ID=mRNA_H-paniculata_contig1816.4408.1|Name=mRNA_H-paniculata_contig1816.4408.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1302bp|location=Sequence derived from alignment at H-paniculata_contig1816:3035..5262- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGTCAGAGCTTCGCGGTCTTGAGGGTAAACTGGCGGCGACGACTTC
CGCCCGCGATAATTTGAGCAGAAAGTTGTCGGATACGACGGCAAACCTGA
TTCACGTAAAGGCGAAGCTAGCGGAACTCAGCGGCCGACTCGAATGGCGT
CAGAGCTTCGCGGTCTTGAGGGTAAACTGGCGGCGACGACTTCCGCCCGC
GATAATTTGAGCAGAAAGTTGTCGGATACGACGGCAAACCTGATTCACGT
AAAGGCGAAGCTAGCGGAACTCAGCGGCCGACTCGATCGGATGGCCCTTG
AGTCTGCCAAGCGGGATGCTGCGGCTGGTGATTCCGCGGCTCTCGCAGCC
GTCGAGGAGGCGAGGGCGGAGACGTTCAAGATGCAAGAGCGGACGGAGAC
CGCAGAAGAGTCGGATGGCCCTTGAGTCTGCCAAGCGGGATGCTGCGGCT
GGTGATTCCGCGGCTCTCGCAGCCGTCGAGGAGGCGAGGGCGGAGACGTT
CAAGATGCAAGAGCGGACGGAGACCGCAGAAGAGGCCCTTGCTACGGCGA
AGGGCAAGAGCGTCGAGGGTCATAAGGAGCGGGAGCAGCTTAGAAGGGAG
CTTCAGGGGCAAGCGCAGGCACAAGGTTCTCTGAAGAAGAAATTGGCAGA
GGCCCAACAAGGCCTGGCTATGGCGAAGGGGAGGGTCGCCGCCGGTTGCC
ATGAATGTCCGAGGAAGGACAGAGAAATTTCGGACCTACAGGACACCCTT
TCGCAGGCCCTTGCTACGGCGAAGGGCAAGAGCGTCGAGGGTCATAAGGA
GCGGGAGCAGCTTAGAAGGGAGCTTCAGGGGCAAGCGCAGGCACAAGGTT
CTCTGAAGAAGAAATTGGCAGAGGCCCAACAAGGCCTGGCTATGGCGAAG
GGGAGGGTCGCCGCCGGTTGCCATGAATGTCCGAGGAAGGACAGAGAAAT
TTCGGACCTACAGGACACCCTTTCGCAGGTGCTCGCGAACGGGTGCCCGC
CAAGCAACCAGACGGGAGAGGCAGCAGGAGGAGCTGGGGTCGCTTGGAGC
CTGCGCGAGGGCTCGGGGTCAGCTTGTTCCTCTGGAGAGTCGAGGAACCA
GTCGGAAAATGAGAAGGTTTGTAGCTGCATCAGAAGGTGAGTGCTCGCGA
ACGGGTGCCCGCCAAGCAACCAGACGGGAGAGGCAGCAGGAGGAGCTGGG
GTCGCTTGGAGCCTGCGCGAGGGCTCGGGGTCAGCTTGTTCCTCTGGAGA
GTCGAGGAACCAGTCGGAAAATGAGAAGGTTTGTAGCTGCATCAGAAGGT
GA back to top
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