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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1163 |
| Cds size | 1011 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1815.4406.1 >prot_H-paniculata_contig1815.4406.1 ID=prot_H-paniculata_contig1815.4406.1|Name=mRNA_H-paniculata_contig1815.4406.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=337bp
MSLSDLALPAAPEIGGGWRDGVTWSSREENRRILGGLAHGDDGDVKRALR
LLTPVCTSAGAMQSPLARRGVADSRVAAKVAPQAPIYDATLLLAIPSSAW
RNARFPRQRCCLPLLPPVPCSADHRSATRAAASLCLTSHVQLLASQAVQP
SVYHLLFAGLEQAPPPAARRPSLWCHPRRYRSVPPAPERSAAKSPISFLH
KFACAGCGLIPYAGATPPIPLPIPIIRCSWPSAPTYCVWSPICAALHAGI
FKCRPHPTASSDGVGDAAGCTSPTVYCAWLGAPPCHVWPLVHVALSASVV
VCRPRQSALPRTPASSPRFVASSREAAAVDIRLCHV* back to topmRNA from alignment at H-paniculata_contig1815:10277..11439+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1815.4406.1 ID=mRNA_H-paniculata_contig1815.4406.1|Name=mRNA_H-paniculata_contig1815.4406.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1163bp|location=Sequence derived from alignment at H-paniculata_contig1815:10277..11439+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTTCAATTGTCAAAGGCAAATATAATGATGTATGATTAGAGCTCTACCTC
CATGTCATTGTCGGACCTTGCTCTTCCTGCCGCGCCCGAGATCGGCGGTG
GCTGGCGAGACGGCGTAACCTGGTCTTCCCGGGAAGAAAATCGACGAATA
TTAGGAGGCCTTGCGCATGGCGACGATGGTGATGTCAAACGGGCTCTGCG
ACTGTTAACGCCGGTTTGCACCAGTGCAGGTGCCATGCAATCCCCCTTGG
CGAGGAGAGGCGTGGCCGACTCCCGGGTGGCTGCGAAGGTGGCTCCTCAG
GCCCCAATCTACGACGCGACCTTACTGCTTGCCATTCCGTCATCGGCCTG
GCGCAATGCGCGCTTCCCAAGACAGCGGTGCTGTCTGCCACTCCTTCCTC
CGGTCCCTTGCTCCGCAGACCACCGATCGGCCACGCGGGCTGCTGCGTCG
CTGTGTCTCACGTCCCATGTCCAACTGCTGGCATCGCAGGCGGTGCAGCC
GAGTGTATACCACCTGCTGTTTGCTGGGCTTGAGCAGGCGCCCCCGCCCG
CCGCGCGTCGCCCTAGTCTGTGGTGTCATCCACGCCGGTATCGTAGTGTG
CCGCCCGCTCCCGAGCGCTCTGCCGCGAAATCCCCCATCTCCTTTCTCCA
CAAATTCGCATGCGCCGGTTGCGGTCTCATCCCATACGCCGGAGCCACAC
CGCCCATTCCCCTTCCCATTCCAATCATACGCTGTAGTTGGCCAAGCGCG
CCTACCTACTGTGTCTGGTCGCCCATTTGCGCCGCTCTCCATGCCGGAAT
CTTCAAGTGCCGCCCGCATCCAACCGCCAGCAGTGACGGCGTGGGCGACG
CCGCTGGTTGTACATCGCCTACTGTTTATTGCGCTTGGCTCGGCGCTCCC
CCCTGTCATGTCTGGCCTCTAGTCCACGTGGCCCTTTCCGCCAGTGTTGT
AGTATGCCGACCGCGTCAAAGCGCTCTGCCACGAACGCCTGCATCCTCCC
CCCGCTTCGTGGCATCCTCCCGGGAGGCCGCAGCAGTCGACATTCGTCTC
TGCCATGTCTGAGAGCCCTGTTGCCACCACTGACTTTCCAGACGTCGTGC
TCGCCCTCCCCGTCCAGACTCCAATCCTTGTGATCACCTCACGGTCAGGC
TCGTACTCCTCCC back to topCoding sequence (CDS) from alignment at H-paniculata_contig1815:10277..11439+ >mRNA_H-paniculata_contig1815.4406.1 ID=mRNA_H-paniculata_contig1815.4406.1|Name=mRNA_H-paniculata_contig1815.4406.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2022bp|location=Sequence derived from alignment at H-paniculata_contig1815:10277..11439+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCATTGTCGGACCTTGCTCTTCCTGCCGCGCCCGAGATCGGCGGTGG
CTGGCGAGACGGCGTAACCTGGTCTTCCCGGGAAGAAAATCGACGAATAT
TAGGAGGCCTTGCGCATGGCGACGATGGTGATGTCAAACGGGCTCTGCGA
CTGTTAACGCCGGTTTGCACCAGTGCAGGTGCCATGCAATCCCCCTTGGC
GAGGAGAGGCGTGGCCGACTCCCGGGTGGCTGCGAAGGTGGCTCCTCAGG
CCCCAATCTACGACGCGACCTTACTGCTTGCCATTCCGTCATCGGCCTGG
CGCAATGCGCGCTTCCCAAGACAGCGGTGCTGTCTGCCACTCCTTCCTCC
GGTCCCTTGCTCCGCAGACCACCGATCGGCCACGCGGGCTGCTGCGTCGC
TGTGTCTCACGTCCCATGTCCAACTGCTGGCATCGCAGGCGGTGCAGCCG
AGTGTATACCACCTGCTGTTTGCTGGGCTTGAGCAGGCGCCCCCGCCCGC
CGCGCGTCGCCCTAGTCTGTGGTGTCATCCACGCCGGTATCGTAGTGTGC
CGCCCGCTCCCGAGCGCTCTGCCGCGAAATCCCCCATCTCCTTTCTCCAC
AAATTCGCATGCGCCGGTTGCGGTCTCATCCCATACGCCGGAGCCACACC
GCCCATTCCCCTTCCCATTCCAATCATACGCTGTAGTTGGCCAAGCGCGC
CTACCTACTGTGTCTGGTCGCCCATTTGCGCCGCTCTCCATGCCGGAATC
TTCAAGTGCCGCCCGCATCCAACCGCCAGCAGTGACGGCGTGGGCGACGC
CGCTGGTTGTACATCGCCTACTGTTTATTGCGCTTGGCTCGGCGCTCCCC
CCTGTCATGTCTGGCCTCTAGTCCACGTGGCCCTTTCCGCCAGTGTTGTA
GTATGCCGACCGCGTCAAAGCGCTCTGCCACGAACGCCTGCATCCTCCCC
CCGCTTCGTGGCATCCTCCCGGGAGGCCGCAGCAGTCGACATTCGTCTCT
GCCATGTCTGAATGTCATTGTCGGACCTTGCTCTTCCTGCCGCGCCCGAG
ATCGGCGGTGGCTGGCGAGACGGCGTAACCTGGTCTTCCCGGGAAGAAAA
TCGACGAATATTAGGAGGCCTTGCGCATGGCGACGATGGTGATGTCAAAC
GGGCTCTGCGACTGTTAACGCCGGTTTGCACCAGTGCAGGTGCCATGCAA
TCCCCCTTGGCGAGGAGAGGCGTGGCCGACTCCCGGGTGGCTGCGAAGGT
GGCTCCTCAGGCCCCAATCTACGACGCGACCTTACTGCTTGCCATTCCGT
CATCGGCCTGGCGCAATGCGCGCTTCCCAAGACAGCGGTGCTGTCTGCCA
CTCCTTCCTCCGGTCCCTTGCTCCGCAGACCACCGATCGGCCACGCGGGC
TGCTGCGTCGCTGTGTCTCACGTCCCATGTCCAACTGCTGGCATCGCAGG
CGGTGCAGCCGAGTGTATACCACCTGCTGTTTGCTGGGCTTGAGCAGGCG
CCCCCGCCCGCCGCGCGTCGCCCTAGTCTGTGGTGTCATCCACGCCGGTA
TCGTAGTGTGCCGCCCGCTCCCGAGCGCTCTGCCGCGAAATCCCCCATCT
CCTTTCTCCACAAATTCGCATGCGCCGGTTGCGGTCTCATCCCATACGCC
GGAGCCACACCGCCCATTCCCCTTCCCATTCCAATCATACGCTGTAGTTG
GCCAAGCGCGCCTACCTACTGTGTCTGGTCGCCCATTTGCGCCGCTCTCC
ATGCCGGAATCTTCAAGTGCCGCCCGCATCCAACCGCCAGCAGTGACGGC
GTGGGCGACGCCGCTGGTTGTACATCGCCTACTGTTTATTGCGCTTGGCT
CGGCGCTCCCCCCTGTCATGTCTGGCCTCTAGTCCACGTGGCCCTTTCCG
CCAGTGTTGTAGTATGCCGACCGCGTCAAAGCGCTCTGCCACGAACGCCT
GCATCCTCCCCCCGCTTCGTGGCATCCTCCCGGGAGGCCGCAGCAGTCGA
CATTCGTCTCTGCCATGTCTGA back to top
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