mRNA_H-paniculata_contig18144.4403.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig18144.4403.1 vs. uniprot
Match: D8LQZ6_ECTSI (Casein kinase (Serine/threonine/tyrosine protein kinase) (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQZ6_ECTSI) HSP 1 Score: 224 bits (570), Expect = 3.820e-70 Identity = 104/116 (89.66%), Postives = 109/116 (93.97%), Query Frame = 1
Query: 4 WENQVVEDLQSLKCVPRHYLFGRHSNKDVLVMELLSGEDMSALRYRQPKPVPGSCASRRPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANFVRRKKNGKEFVIIDFGTCR 351
WENQVVE LQSL CVPRHYLFG+H NKDVLVMELLSGEDMSALR+RQPK +PGS AS+RPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANFVRRKKNGKEFVIIDFG +
Sbjct: 100 WENQVVEGLQSLSCVPRHYLFGKHGNKDVLVMELLSGEDMSALRHRQPKAIPGSLASQRPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANFVRRKKNGKEFVIIDFGLAK 215
BLAST of mRNA_H-paniculata_contig18144.4403.1 vs. uniprot
Match: A0A6H5L231_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L231_9PHAE) HSP 1 Score: 226 bits (577), Expect = 6.680e-69 Identity = 105/116 (90.52%), Postives = 110/116 (94.83%), Query Frame = 1
Query: 4 WENQVVEDLQSLKCVPRHYLFGRHSNKDVLVMELLSGEDMSALRYRQPKPVPGSCASRRPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANFVRRKKNGKEFVIIDFGTCR 351
WENQVVEDLQSL CVPRHYLFG+H NKDVLVMELLSGEDMSALR+RQPK +PGS AS+RPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANFVRRKKNGKEFVIIDFG +
Sbjct: 55 WENQVVEDLQSLSCVPRHYLFGKHGNKDVLVMELLSGEDMSALRHRQPKAIPGSLASQRPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANFVRRKKNGKEFVIIDFGLAK 170
BLAST of mRNA_H-paniculata_contig18144.4403.1 vs. uniprot
Match: A0A835YU46_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU46_9STRA) HSP 1 Score: 112 bits (280), Expect = 8.090e-27 Identity = 56/113 (49.56%), Postives = 74/113 (65.49%), Query Frame = 1
Query: 4 WENQVVEDLQSLKCVPRHYLFGRHSNKDVLVMELLSGEDMSALRYRQPKPVPGSCASRRPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANFVRRKKNGKEFVIIDFG 342
WE+ V+ +LQSL V R+ H +K+VLVMELL G D+ ALR RQ +C P +P+ C DLA +ML CL+G+H GYLHRDVKP+NFVRR + K+ ++DFG
Sbjct: 77 WESYVLRELQSLPFVARYVGQHTHGDKEVLVMELLHGGDVRALRMRQ------NCPPGTP--MPISACIDLAQEMLRCLEGLHGAGYLHRDVKPSNFVRRNRGDKQLCLVDFG 181
BLAST of mRNA_H-paniculata_contig18144.4403.1 vs. uniprot
Match: A0A7S2Y1F0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1F0_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.510e-26 Identity = 58/117 (49.57%), Postives = 75/117 (64.10%), Query Frame = 1
Query: 4 WENQVVEDLQSLKCVPRHYLFG----RHSNKDVLVMELLSGEDMSALRYRQPKPVPGSCASRRPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANFVRRKKNGKEFVIIDFG 342
WEN+V+ LQS VPRH+ FG + VLVM++L G+DMSALR+RQP S R +PL VC L QML+CLK +H+ G++HRDVKP+NF+R + F IIDFG
Sbjct: 18 WENEVLLALQSSPHVPRHHWFGVVNFSKGARPVLVMQMLGGKDMSALRHRQP--------SLR---MPLQVCLQLTYQMLDCLKSLHALGFVHRDVKPSNFIRDSPTSRRFYIIDFG 123
BLAST of mRNA_H-paniculata_contig18144.4403.1 vs. uniprot
Match: A0A482URH2_9ARCH (Protein kinase domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482URH2_9ARCH) HSP 1 Score: 88.2 bits (217), Expect = 7.500e-19 Identity = 41/116 (35.34%), Postives = 71/116 (61.21%), Query Frame = 1
Query: 4 WENQVVEDLQSLKCVPRHYLFGRHSNKDVLVMELLSGEDMSALRYRQPKPVPGSCASRRPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANFVRRKKNGKEFVIIDFGTCR 351
WE V++ L VP+ + G++ +D +VM+L++GEDM+ +R R ++ + G +PL + L QML C++ +H+ GY+HRDVKP+NF+++ +F +IDFG +
Sbjct: 17 WEGNVMQALAHTPHVPQFIMSGQYEKRDFIVMDLMNGEDMAHIRNR-------IRSASKTGLVPLPIVVYLCKQMLTCIEALHTHGYVHRDVKPSNFMQKTAEDTKFCVIDFGLVK 125
BLAST of mRNA_H-paniculata_contig18144.4403.1 vs. uniprot
Match: A0A6B2L871_9EUKA (Protein kinase domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L871_9EUKA) HSP 1 Score: 72.4 bits (176), Expect = 1.100e-12 Identity = 45/119 (37.82%), Postives = 62/119 (52.10%), Query Frame = 1
Query: 7 ENQVVEDLQSLKCVPRHYLFGRHSNK-DVLVMELLSGEDMSALRYRQPKPVPGSCASRRPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANFV---RRKKNGKEFVIIDFGTCR 351
E ++ L+ K VP+ GRH +K + +VM+LL GE++SALR R L L +QML +K VH GYLHRD+KP NFV R N + ++IDFG +
Sbjct: 3 EENILRSLKGCKYVPKILNSGRHEDKVNFIVMDLL-GENLSALRRRATNQT-----------FSLLTTLMLGMQMLRAIKEVHDAGYLHRDIKPGNFVLGTERTNNPRTVILIDFGLAK 109
BLAST of mRNA_H-paniculata_contig18144.4403.1 vs. uniprot
Match: A0A7S1CG14_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CG14_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 1.830e-12 Identity = 44/119 (36.97%), Postives = 64/119 (53.78%), Query Frame = 1
Query: 4 WENQVVEDLQSLKCVPRHYLFGRHSNKD-VLVMELLSGEDMSALRYRQPKPVPGSCASRRPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANFV--RRKKNGKEFVIIDFGTCR 351
WE++++ +Q VPRH + S + VLVM+ L G+++S LR+ QP G P L LQ+L CL+G+H GY+HRDVKP+NFV + I+DFG +
Sbjct: 29 WESEILSKMQVFPFVPRHARYATLSGRRRVLVMQRL-GKNLSELRHAQPG-----------GKFPPRTALALGLQLLTCLEGLHQMGYVHRDVKPSNFVVGLGPAGRGQLHILDFGLSK 135
BLAST of mRNA_H-paniculata_contig18144.4403.1 vs. uniprot
Match: D2VWM5_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VWM5_NAEGR) HSP 1 Score: 70.9 bits (172), Expect = 4.560e-12 Identity = 43/115 (37.39%), Postives = 63/115 (54.78%), Query Frame = 1
Query: 16 VVEDLQSLKCVPRHYLFGRHSNKDVLVMELLSGEDMSALRYRQPKPVPGSCASRRPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANFVR---RKKNGKEFVIIDFGTCR 351
++ +Q+ V R+ GR + + LVME L GE ++ LR R P+ G + L +QM+E L+GVH GY+HRDVKP+NFV + K G+ + +IDFG R
Sbjct: 69 ALKKVQACPYVVRYIHSGRQDDYNFLVMERL-GESLADLRKRTPR-----------GAFSMSTTLRLGIQMIESLEGVHKLGYIHRDVKPSNFVMGRSKPKRGRTY-LIDFGLAR 170
BLAST of mRNA_H-paniculata_contig18144.4403.1 vs. uniprot
Match: A0A1J4KK82_9EUKA (CK1 family protein kinase n=1 Tax=Tritrichomonas foetus TaxID=1144522 RepID=A0A1J4KK82_9EUKA) HSP 1 Score: 69.3 bits (168), Expect = 2.140e-11 Identity = 43/115 (37.39%), Postives = 60/115 (52.17%), Query Frame = 1
Query: 7 ENQVVEDLQSLKCVPRHYLFGRHSNKDVLVMELLSGEDMSALRYRQPKPVPGSCASRRPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANFVRRKKNGKEFVIIDFGTCR 351
E +++D+Q+ P++ G + L+MELL G +S LR K C SR L LG L M+ C++ +H GYLHRD+KP NF+ R K V+IDFG R
Sbjct: 143 ETAILKDIQTCDYFPKYVKSGTTNKYRYLIMELL-GPSLSTLR----KATDTKCFSRY-SYLHLG------LHMIRCIEELHKLGYLHRDIKPGNFLVRPNRQKPLVLIDFGLSR 245
BLAST of mRNA_H-paniculata_contig18144.4403.1 vs. uniprot
Match: A0A0G4IY82_PLABS (Protein kinase domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IY82_PLABS) HSP 1 Score: 66.6 bits (161), Expect = 2.140e-10 Identity = 42/118 (35.59%), Postives = 57/118 (48.31%), Query Frame = 1
Query: 1 QWENQVVEDLQSLKCVPRHYLFGRHSNKDVLVMELLSGEDMSALRYRQPKPVPGSCASRRPGGLPLGVCCDLALQMLECLKGVHSCGYLHRDVKPANFVRRKKNGK-EFVIIDFGTCR 351
+WE V+ED+Q V G + + L E +S R RQP G G + L ML+ L+ +H CGY+HRDVKP+NFVR + K E ++IDFG R
Sbjct: 100 EWEASVLEDIQGCPGVCPMVEQGTLESGGTYIAMQLCQETISEYRKRQPG-----------GQFRPGKAAAIVLSMLDSLEALHKCGYVHRDVKPSNFVRPVGSAKHECLLIDFGLAR 206 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18144.4403.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig18144.4403.1 >prot_H-paniculata_contig18144.4403.1 ID=prot_H-paniculata_contig18144.4403.1|Name=mRNA_H-paniculata_contig18144.4403.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=117bp QWENQVVEDLQSLKCVPRHYLFGRHSNKDVLVMELLSGEDMSALRYRQPKback to top mRNA from alignment at H-paniculata_contig18144:2605..5061+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig18144.4403.1 ID=mRNA_H-paniculata_contig18144.4403.1|Name=mRNA_H-paniculata_contig18144.4403.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2457bp|location=Sequence derived from alignment at H-paniculata_contig18144:2605..5061+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig18144:2605..5061+ >mRNA_H-paniculata_contig18144.4403.1 ID=mRNA_H-paniculata_contig18144.4403.1|Name=mRNA_H-paniculata_contig18144.4403.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=702bp|location=Sequence derived from alignment at H-paniculata_contig18144:2605..5061+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |