mRNA_H-paniculata_contig1814.4401.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1814.4401.1
Unique NamemRNA_H-paniculata_contig1814.4401.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig1814.4401.1 vs. uniprot
Match: A0A6H5JBD2_9PHAE (Superoxide dismutase [Fe] n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBD2_9PHAE)

HSP 1 Score: 454 bits (1167), Expect = 5.410e-154
Identity = 216/269 (80.30%), Postives = 242/269 (89.96%), Query Frame = 3
Query:  216 CAALAAIS--GAEAQNIPVPPLPYSYSGLVPFISEHALRVHHLGHHAAYTSQLNTVLEQMRWNPQLKHLAKMGVDELLHHLDSVPEEYRDAVRRAGGGFVNHDLFWNVLSPWGGHPPGPDSDTIQERHLATAIDKSFGSFAEMQFAFSNAASSFSGSGWVFVVYDHDEKDLDMVVTNGQDTPATNPKTTPILLLDVWEHSYYLDYENRKDVYITHFWGAVDWARVATRYAEASGEVVPDALPSPERREKEAIGLTPAADDASKALLKED 1016
            C AL+ ++  G  AQN+PVPPLPYSY  LVPFISEHALRVHHLGHHAAYTSQLN VLE+MRW+P+LKHLAKMGVDELLH+L+SVPE+YR A RRAGGGFVNHDLFWNVLSPWGGHPPG +SDTIQERHLA AID+SFGSFAEMQ+AFSNAAS+FSGSGWVF+ ++H+EK LD+VV   +DTPA NP TTPILLLD+WEH+YYLDYENRKDVYIT+FW +VDW RVATRYAEASGEVVP+ALPSPERREK A+GLTPA  DA KALL ED
Sbjct:   16 CLALSTLAAVGTSAQNLPVPPLPYSYGSLVPFISEHALRVHHLGHHAAYTSQLNAVLERMRWDPELKHLAKMGVDELLHNLESVPEDYRAAARRAGGGFVNHDLFWNVLSPWGGHPPGQESDTIQERHLAEAIDRSFGSFAEMQYAFSNAASAFSGSGWVFLYFNHEEKTLDVVVLEYEDTPAMNPNTTPILLLDLWEHAYYLDYENRKDVYITNFWASVDWPRVATRYAEASGEVVPEALPSPERREKGAVGLTPALQDADKALLAED 284          
BLAST of mRNA_H-paniculata_contig1814.4401.1 vs. uniprot
Match: A0A836CJJ6_9STRA (Superoxide dismutase [Fe] n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJJ6_9STRA)

HSP 1 Score: 303 bits (776), Expect = 2.320e-95
Identity = 141/266 (53.01%), Postives = 192/266 (72.18%), Query Frame = 3
Query:  213 ACAALAAISGAEAQNIPVPPLPYSYSGLVPFISEHALRVHHLGHHAAYTSQLNTVLEQMRWNPQLKHLAKMGVDELLHHLDSVPEEYRDAVRRAGGGFVNHDLFWNVLSPWGGHPPGPDSDTIQERHLATAIDKSFGSFAEMQFAFSNAASSFSGSGWVFVVYDHDEKDLDMVVTNGQDTPATNPKTTPILLLDVWEHSYYLDYENRKDVYITHFWGAVDWARVATRYAEASGEVVPDALPSPERREKEAIGLTPAADDASKALLK 1010
            A AAL+ ++ A AQ++PVPPLPY+Y  L P+I    ++VHHLGHHAAYT Q+N  LE MR +P +KHLAKMG+DELLHHLD VPE++   +R AGGG+VNHDL+W  LSPWGG PP   S TIQER    A+D++FGS  +++ AF  AA++  GSGW F+ ++   + L++  T G DTPA +P+  P+LLLD+WEH+YYL ++N +  Y+  FW  VDW   ATRYA ASGEV P+ LP+P+ REK+ +GL P  D+ ++A+ +
Sbjct:    8 AVAALSFVAAALAQHLPVPPLPYAYDSLEPWIDAATMKVHHLGHHAAYTKQVNGALEVMRADPNMKHLAKMGIDELLHHLDEVPEQHAGTIRNAGGGYVNHDLWWKSLSPWGGVPPTDASPTIQERRFKAAVDRTFGSVDKLKDAFGTAAAAVFGSGWTFLYFNKKARTLEITNTAGHDTPAMDPEKAPLLLLDMWEHAYYLKHQNMRAAYVDAFWHVVDWPAAATRYALASGEVAPEPLPAPDAREKQRVGLVPT-DERAEAVAE 272          
BLAST of mRNA_H-paniculata_contig1814.4401.1 vs. uniprot
Match: A0A6V2WS91_HETAK (Superoxide dismutase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2WS91_HETAK)

HSP 1 Score: 228 bits (581), Expect = 7.780e-67
Identity = 112/221 (50.68%), Postives = 146/221 (66.06%), Query Frame = 3
Query:  249 AQNIPVPPLPYSYSGLVPFISEHALRVHHLGHHAAYTSQLNTVLEQMRWNPQLKHLAKMGVDELLHHLDSVPEEYRDAVRRAGGGFVNHDLFWNVLSPWGGHPPGPDSDTIQERHLATAIDKSFGSFAEMQFAFSNAASSFSGSGWVFVVYDHDEKDLDMVVTNGQDTPAT-NPKTTPILLLDVWEHSYYLDYENRKDVYITHFWGAVDWARVATRYAEAS 908
            AQN+PVPPLPY Y+ L PF+ E  +RVHHLGHHAA T  LN VL  +R +P+ KHLAKMGVD+LLHHLD VPEE+R AV  AGGG+VNH+LFWN L+P G    GP      +  L   +   FGS   ++ A   AA    GSGWV++VY+     L+++ T  Q+ PA  +P + P+L LD+WEH+YYL ++NR+  Y+  FW  +DW  VA R  +AS
Sbjct:   23 AQNLPVPPLPYDYNALEPFMDEETVRVHHLGHHAASTHALNKVLSTLREHPETKHLAKMGVDKLLHHLDEVPEEFRTAVANAGGGYVNHELFWNTLAPGGXXXXGP-----VDARLLDEVAARFGSAEGLREALGEAAGQLYGSGWVWLVYNSLSAQLEILTTANQEHPAAAHPGSFPLLALDLWEHAYYLKHQNRRADYVEAFWALIDWEEVARRLEDAS 238          
BLAST of mRNA_H-paniculata_contig1814.4401.1 vs. uniprot
Match: D7FYD2_ECTSI (Superoxide dismutase, Destroys radicals which are normally produced within the cells and which are t n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYD2_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 3.410e-66
Identity = 104/126 (82.54%), Postives = 114/126 (90.48%), Query Frame = 3
Query:  216 CAALAAIS--GAEAQNIPVPPLPYSYSGLVPFISEHALRVHHLGHHAAYTSQLNTVLEQMRWNPQLKHLAKMGVDELLHHLDSVPEEYRDAVRRAGGGFVNHDLFWNVLSPWGGHPPGPDSDTIQE 587
            C AL+ ++  GA AQN+PVPPLPYSY  LVPFISEHALRVHHLGHHAAYTSQLN VLE+MRW+P+LKHLAKMGVDELLH+L SVPE+YR A RRAGGGFVNHDLFWNVLSPWGGHPPG +SDTIQE
Sbjct:   16 CLALSTLAAVGASAQNLPVPPLPYSYGSLVPFISEHALRVHHLGHHAAYTSQLNAVLERMRWDPELKHLAKMGVDELLHNLGSVPEDYRAAARRAGGGFVNHDLFWNVLSPWGGHPPGQESDTIQE 141          
BLAST of mRNA_H-paniculata_contig1814.4401.1 vs. uniprot
Match: A0A7S1EAE0_HEMAN (Superoxide dismutase n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EAE0_HEMAN)

HSP 1 Score: 205 bits (521), Expect = 5.400e-58
Identity = 105/223 (47.09%), Postives = 137/223 (61.43%), Query Frame = 3
Query:  252 QNIPVPPLPYSYSGLVPFISEHALRVHHLGHHAAYTSQLNTVLEQMRWNPQLKHLAKMGVDELLHHLDSVPEEYRDAVRRAGGGFVNHDLFWNVLSPWGGHPPGPDSDTIQERHLATAIDKSFGSFAEMQFAFSNAASSFSGSGWVFVVYDHDEKDLDMVVTNGQDTPATNPKTTPILLLDVWEHSYYLDYENRKDVYITHFWGAVDWARVATRY--AEASGE 914
            Q++ +P LPY Y+ L P I E  +RVHHLGHH AYT+ +N  L  +R +    HLAKMG+D LL HLD VPE  R AVR  GGGFVNH LFW  L+P G      +++   +  L  AI + FGS  E+Q AF+ AA+   GSGW +VV D     L +  T  QDTP     TT +  LDVWEH+YYL Y+N++  Y++ FW  ++W  VA R+  A ASG+
Sbjct:   32 QSLELPALPYDYAALEPSIDEATMRVHHLGHHQAYTTTINQALTALRSDKATNHLAKMGIDSLLQHLDEVPEALRGAVRNGGGGFVNHALFWKALTPVGSPK---NTEPTADSALGAAIARDFGSMLELQNAFNTAATKVFGSGWAWVVVDEASGKLSVTSTPNQDTPGMKRGTTVLFGLDVWEHAYYLKYQNKRAEYVSAFWKILNWEEVAARHKAAVASGK 251          
BLAST of mRNA_H-paniculata_contig1814.4401.1 vs. uniprot
Match: A0A2R5GX41_9STRA (Superoxide dismutase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GX41_9STRA)

HSP 1 Score: 201 bits (512), Expect = 9.090e-57
Identity = 106/238 (44.54%), Postives = 139/238 (58.40%), Query Frame = 3
Query:  198 GLWWTACAALAAISGAE------AQNIPVPPLPYSYSGLVPFISEHALRVHHLGHHAAYTSQLNTVLEQMRWNPQLKHLAKMGVDELLHHLDSVPEEYRDAVRRAGGGFVNHDLFWNVLSPWGGHPPGPDSDTIQERHLATAIDKSFGSFAEMQFAFSNAASSFSGSGWVFVVYDHDEKDLDMVVTNGQDTPATNPKTTPILLLDVWEHSYYLDYENRKDVYITHFWGAVDWARVATR 893
            G W  A   L  ++G        AQN+P+PPLPY+Y  L P+I E  +R+HHL HH AYT  LN  L  MR +P+LKHLAKMG+D+LL HLD VP   R  VR  GGG+VNHD FW  LSP G   PG  S       L  AI+KSFGS    +  FS A     GSGW ++ ++ + + L +  T+ QD+P T+     I+ LDVWEH+YYL ++NR+  Y+   +  +DW     R
Sbjct:    5 GRWVCASLVLGVLTGTATPPTVAAQNLPLPPLPYAYDALEPYIDEQTMRIHHLKHHQAYTDNLNKALATMRGDPELKHLAKMGIDKLLQHLDEVPPRLRGQVRNHGGGYVNHDQFWRNLSPNGAGEPGQGSA------LQHAIEKSFGSLDGFKTVFSEACLGVFGSGWCWLCFNTEAQTLSVETTSNQDSP-TSAGLEVIIALDVWEHAYYLKHQNRRKDYLEAIFAVLDWQEADAR 235          
BLAST of mRNA_H-paniculata_contig1814.4401.1 vs. uniprot
Match: L1I7G7_GUITC (Superoxide dismutase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I7G7_GUITC)

HSP 1 Score: 193 bits (490), Expect = 1.120e-53
Identity = 99/219 (45.21%), Postives = 130/219 (59.36%), Query Frame = 3
Query:  249 AQNIPVPPLPYSYSGLVPFISEHALRVHHLGHHAAYTSQLNTVLEQMRWNPQLKHLAKMGVDELLHHLDSVPEEYRDAVRRAGGGFVNHDLFWNVLSPWGGHPPGPDSDTIQERHLATAIDKSFGSFAEMQFAFSNAASSFSGSGWVFVVYDHDEKDLDMVVTNGQDTPATNPKTTPILLLDVWEHSYYLDYENRKDVYITHFWGAVDWARVATRYAEA 905
            AQN+ +P LPY Y GL P + E  +RVHHLGHHAAY + +N VL  +R N   K LAKMG+D+LL +LD VP E+   +R  GGGFVNH LFW  +SP G      + D +       A+   FGS   +   F   A+   GSGW ++V +H  K L +  T  QDTPA      PIL LD+WEH+YYL ++N++  YI+ F+  +DW   A RY EA
Sbjct:   22 AQNLELPRLPYEYDGLEPHVDEETMRVHHLGHHAAYLATVNNVLSMLRSNETTKPLAKMGIDKLLQNLDQVPTEHVTPLRNGGGGFVNHFLFWKCMSPNGTRF---EMDDV----FGKAVTAQFGSIQALLQEFREKATKLFGSGWTWLVLEHSTKRLYITTTPNQDTPAMQVGHIPILGLDLWEHAYYLKHQNKRAEYISSFFNVIDWKATAARYEEA 233          
BLAST of mRNA_H-paniculata_contig1814.4401.1 vs. uniprot
Match: A0A2W4Q0T6_9FIRM (Superoxide dismutase n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A2W4Q0T6_9FIRM)

HSP 1 Score: 187 bits (474), Expect = 7.270e-52
Identity = 103/214 (48.13%), Postives = 133/214 (62.15%), Query Frame = 3
Query:  264 VPPLPYSYSGLVPFISEHALRVHHLGHHAAYTSQLNTVLEQMRWNPQLKHLAKMGVDELLHHLDSVPEEYRDAVRRAGGGFVNHDLFWNVLSPWGGHPPGPDSDTIQERHLATAIDKSFGSFAEMQFAFSNAASSFSGSGWVFVVYDHDEKDLDMVVTNGQDTPATNPKTTPILLLDVWEHSYYLDYENRKDVYITHFWGAVDWARVATRYAEA 905
            +PPLPY Y+ L P+I E  +R+HH  HHAAY + LN  LEQ    P+L++L+   ++ELL ++D VPE  R AVR  GGG  NH LFW +LSP GG  P  +        LA AI  +FGSF + +  FS AA++  GSGW ++V D + K L +  T  QD+P     T PIL LDVWEH+YYL Y+NR+  YI  FW  V+W  VA RYA A
Sbjct:    5 LPPLPYDYNALEPYIDEQTMRIHHDKHHAAYVNNLNAALEQA---PELQNLS---IEELLRNIDKVPENIRTAVRNNGGGHANHTLFWEILSPQGGGEPTGE--------LADAIAATFGSFEKFKEEFSKAAANRFGSGWAWLVVDQEGK-LQVYSTANQDSPYMEGHT-PILGLDVWEHAYYLKYQNRRPEYIAAFWNIVNWPEVARRYAAA 202          
BLAST of mRNA_H-paniculata_contig1814.4401.1 vs. uniprot
Match: A0A3M2A1R1_9CHLR (Superoxide dismutase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M2A1R1_9CHLR)

HSP 1 Score: 182 bits (461), Expect = 5.420e-50
Identity = 99/214 (46.26%), Postives = 132/214 (61.68%), Query Frame = 3
Query:  264 VPPLPYSYSGLVPFISEHALRVHHLGHHAAYTSQLNTVLEQMRWNPQLKHLAKMGVDELLHHLDSVPEEYRDAVRRAGGGFVNHDLFWNVLSPWGGHPPGPDSDTIQERHLATAIDKSFGSFAEMQFAFSNAASSFSGSGWVFVVYDHDEKDLDMVVTNGQDTPATNPKTTPILLLDVWEHSYYLDYENRKDVYITHFWGAVDWARVATRYAEA 905
            +P LPY+Y  L P+I    + +HH  HHA YT+ LN  LE    +P+L   A   ++ELL +LD+VPE  R AVR  GGG+ NH LFW ++SP GG  P  +        LATAI+ +FGSFA  +  FS AA++  GSGW ++  D D   L +  T  QDTP  +  T PIL LDVWEH+YYL+Y+NR+  YI ++W  V+W +VA  YA A
Sbjct:    5 LPALPYAYDALEPYIDARTMEIHHSKHHAGYTNNLNKALEN---HPEL---ANKSIEELLGNLDAVPESIRTAVRNNGGGYANHALFWTIMSPNGGGEPTGE--------LATAINNAFGSFANFKEQFSKAAATRFGSGWAWLYVDKDGN-LAVTSTPNQDTPLMDGNT-PILGLDVWEHAYYLNYQNRRGDYIANWWNVVNWDQVAANYANA 202          
BLAST of mRNA_H-paniculata_contig1814.4401.1 vs. uniprot
Match: UPI000421F29C (superoxide dismutase n=1 Tax=Atopococcus tabaci TaxID=269774 RepID=UPI000421F29C)

HSP 1 Score: 178 bits (452), Expect = 9.990e-49
Identity = 96/214 (44.86%), Postives = 136/214 (63.55%), Query Frame = 3
Query:  264 VPPLPYSYSGLVPFISEHALRVHHLGHHAAYTSQLNTVLEQMRWNPQLKHLAKMGVDELLHHLDSVPEEYRDAVRRAGGGFVNHDLFWNVLSPWGGHPPGPDSDTIQERHLATAIDKSFGSFAEMQFAFSNAASSFSGSGWVFVVYDHDEKDLDMVVTNGQDTPATNPKTTPILLLDVWEHSYYLDYENRKDVYITHFWGAVDWARVATRYAEA 905
            +P LPY Y+ L P+I E  +R+HH  HH  Y +++N+ LE    +P+L   A++ ++EL+  LD+VPE+ R AVR  GGG  NH LFW +LSP GG  P        E  L  AI+ +FGSF E +  F+ AA+   GSGW ++V ++ +  L++V T  QD+P +    TPIL LDVWEH+YYL Y+N++  YI+ FW  V+W  VA R+AEA
Sbjct:    5 LPELPYDYNALEPYIDEQTMRLHHDKHHNTYVTKVNSALEN---HPEL---AELSIEELMQKLDTVPEDIRTAVRNNGGGHANHSLFWTILSPNGGGEP--------EGELKEAIESAFGSFDEFKEKFAAAAAGRFGSGWAWLVVNNGK--LEVVDTLNQDSPLSQG-LTPILGLDVWEHAYYLKYQNKRPEYISAFWNVVNWEEVARRFAEA 201          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1814.4401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBD2_9PHAE5.410e-15480.30Superoxide dismutase [Fe] n=1 Tax=Ectocarpus sp. C... [more]
A0A836CJJ6_9STRA2.320e-9553.01Superoxide dismutase [Fe] n=1 Tax=Tribonema minus ... [more]
A0A6V2WS91_HETAK7.780e-6750.68Superoxide dismutase n=1 Tax=Heterosigma akashiwo ... [more]
D7FYD2_ECTSI3.410e-6682.54Superoxide dismutase, Destroys radicals which are ... [more]
A0A7S1EAE0_HEMAN5.400e-5847.09Superoxide dismutase n=2 Tax=Hemiselmis andersenii... [more]
A0A2R5GX41_9STRA9.090e-5744.54Superoxide dismutase n=1 Tax=Hondaea fermentalgian... [more]
L1I7G7_GUITC1.120e-5345.21Superoxide dismutase n=1 Tax=Guillardia theta (str... [more]
A0A2W4Q0T6_9FIRM7.270e-5248.13Superoxide dismutase n=1 Tax=Firmicutes bacterium ... [more]
A0A3M2A1R1_9CHLR5.420e-5046.26Superoxide dismutase n=1 Tax=Chloroflexi bacterium... [more]
UPI000421F29C9.990e-4944.86superoxide dismutase n=1 Tax=Atopococcus tabaci Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1814contigH-paniculata_contig1814:2210..20452 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score198.4
Seed ortholog evalue4.6e-48
Seed eggNOG ortholog55529.EKX32032
KEGG koko:K04564
KEGG Pathwayko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.oxidoreductase activity, acting on superoxide radicals as acceptor
EggNOG OGsCOG0605@1,KOG0876@2759
EC1.15.1.1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons7
Model size1912
Cds size840
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929411.5529306-UTR-H-paniculata_contig1814:2209..30991622929411.5529306-UTR-H-paniculata_contig1814:2209..3099Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1814 2210..3099 -
1691480849.7533903-UTR-H-paniculata_contig1814:2209..30991691480849.7533903-UTR-H-paniculata_contig1814:2209..3099Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1814 2210..3099 -
1622929411.6493883-UTR-H-paniculata_contig1814:20270..204521622929411.6493883-UTR-H-paniculata_contig1814:20270..20452Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1814 20271..20452 -
1691480849.839558-UTR-H-paniculata_contig1814:20270..204521691480849.839558-UTR-H-paniculata_contig1814:20270..20452Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1814 20271..20452 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929411.5640066-CDS-H-paniculata_contig1814:3099..31751622929411.5640066-CDS-H-paniculata_contig1814:3099..3175Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1814 3100..3175 -
1691480849.766047-CDS-H-paniculata_contig1814:3099..31751691480849.766047-CDS-H-paniculata_contig1814:3099..3175Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1814 3100..3175 -
1622929411.5740542-CDS-H-paniculata_contig1814:3788..39131622929411.5740542-CDS-H-paniculata_contig1814:3788..3913Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1814 3789..3913 -
1691480849.7803717-CDS-H-paniculata_contig1814:3788..39131691480849.7803717-CDS-H-paniculata_contig1814:3788..3913Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1814 3789..3913 -
1622929411.5847538-CDS-H-paniculata_contig1814:4489..46281622929411.5847538-CDS-H-paniculata_contig1814:4489..4628Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1814 4490..4628 -
1691480849.7955856-CDS-H-paniculata_contig1814:4489..46281691480849.7955856-CDS-H-paniculata_contig1814:4489..4628Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1814 4490..4628 -
1622929411.597916-CDS-H-paniculata_contig1814:5581..56791622929411.597916-CDS-H-paniculata_contig1814:5581..5679Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1814 5582..5679 -
1691480849.8049116-CDS-H-paniculata_contig1814:5581..56791691480849.8049116-CDS-H-paniculata_contig1814:5581..5679Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1814 5582..5679 -
1622929411.610067-CDS-H-paniculata_contig1814:6168..62841622929411.610067-CDS-H-paniculata_contig1814:6168..6284Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1814 6169..6284 -
1691480849.8131404-CDS-H-paniculata_contig1814:6168..62841691480849.8131404-CDS-H-paniculata_contig1814:6168..6284Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1814 6169..6284 -
1622929411.6223686-CDS-H-paniculata_contig1814:11675..118171622929411.6223686-CDS-H-paniculata_contig1814:11675..11817Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1814 11676..11817 -
1691480849.8215733-CDS-H-paniculata_contig1814:11675..118171691480849.8215733-CDS-H-paniculata_contig1814:11675..11817Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1814 11676..11817 -
1622929411.6360123-CDS-H-paniculata_contig1814:20126..202701622929411.6360123-CDS-H-paniculata_contig1814:20126..20270Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1814 20127..20270 -
1691480849.8304307-CDS-H-paniculata_contig1814:20126..202701691480849.8304307-CDS-H-paniculata_contig1814:20126..20270Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1814 20127..20270 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1814.4401.1prot_H-paniculata_contig1814.4401.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1814 3100..20270 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1814.4401.1

>prot_H-paniculata_contig1814.4401.1 ID=prot_H-paniculata_contig1814.4401.1|Name=mRNA_H-paniculata_contig1814.4401.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=280bp
MARYDGLWWTACAALAAISGAEAQNIPVPPLPYSYSGLVPFISEHALRVH
HLGHHAAYTSQLNTVLEQMRWNPQLKHLAKMGVDELLHHLDSVPEEYRDA
VRRAGGGFVNHDLFWNVLSPWGGHPPGPDSDTIQERHLATAIDKSFGSFA
EMQFAFSNAASSFSGSGWVFVVYDHDEKDLDMVVTNGQDTPATNPKTTPI
LLLDVWEHSYYLDYENRKDVYITHFWGAVDWARVATRYAEASGEVVPDAL
PSPERREKEAIGLTPAADDASKALLKEDL*
back to top

mRNA from alignment at H-paniculata_contig1814:2210..20452-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1814.4401.1 ID=mRNA_H-paniculata_contig1814.4401.1|Name=mRNA_H-paniculata_contig1814.4401.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=18243bp|location=Sequence derived from alignment at H-paniculata_contig1814:2210..20452- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CATAGATCGTGTGCGGGTACTATACGGTTGTGTCAAGCAAGCACGGCGTC GATCTCAGGCTTCATTCCCGTGTATTGTTGATATAGTGTGGAATTAAACA ACCGGGACGTTGATTCAGGCAACGAAGCCTTATCCTCCGAGCTCTGTAAC TTCAACGATTAGCAGAATCGAACACCGTTGTAATGGCGCGCTATGATGGG CTATGGTGGACAGCATGTGCGGCACTTGCGGCGATCAGCGGGGCAGAGGC CCAGAACATCCCTGTACCTCCTCTGCCCTATTCATACTCAGGACTCGTTC CTTTCATCTCCGAACACGCTTTGAGGGTGAGATGAAGTAGCGTGTAACGA GGTCGTTGTCCCAGTATCTCTTCAACACTATTGGAACATAGTTCTTTGCT CAACCTTTTTTTCTGCAGTTTTGGAAGAGTTGTGCTACAGTGTAGTGTGG CATATTTCCCCCCCTGTACGTAGATCTACGTGAGGATCAGCAAGACTTCA ATAGGTAGACAGATACACTGCACTGGTTTAGACGACAGCAGCAGAGATGG GTACAGTTATTGTGCATAGAAAAAGCGCAGAATCATCAGCTTTCCAACGT GTTGTAGTCCTCTGCTCTGTAGATATTGTTATTGTTGTTGCTCCTATTAG TGCTGCTGCAGTGTTGCTATTGTTGCAGTTAGTCGAGTCTGCTGGTTGTA ATATACCACTGATCCGGTTGAGGAAAATAATGGAACATTCAAATGTAACG TGTGCGACCTGAGATATCATTACAATCGCCCTAGCGTGCTCTCCTTGCAC TTTTCCTTCGCCCAGGCATGCCCCTTGCCCCTCTCCGAACCGTTTCACAC ATCTGGTGGTACAGTTCGTGATCCATCCGATGCCCATCATCGAACGGATC ATTCCTCGTGATGCGCACATGTCATGACGATGTGTGAATGTCTCAACTGA TCCGTACACGCTCCATGCTGTGTACATATTCGAACACGAGCGATGCGCGC TCTATTCATTCTCAGCACACATTTCATCTCCGTTGGTCTATATACGCTCT ATGATGCGTACATGTTTGTCCACGAGTGATGCGTACGCTATGTATCAGCA CACGTTTTGTCTCAACTGGTCCGTACACGCTCTATGATGCATACATGTTT GACCACGAGCAATACCCACTCTGCGCATCGCCAGCACGTATTTTGTCTCA ACTGGTCTGTACACGGTCTACGATGCCCACATGTTTGTCCACGAGCGGTT TATACGCTATGTATCGCCAGCACACATTTTGTCTCCACTGGTCCGTACAC GCTCTATCATGCGCAAAAGTTTGTCCACCAGCGAAGCGTACGCTATGCAT CATCAGCACACACTTTTTCTTCACTGGTCCGTACGCACTCCATCATGCGC ATATGTTTGTCCACCAGCGAAGCGTACGTTATGTATCATGTGTATGTGCA TCATTGTTCTATGGGTGTGGGAAGAGCCGAAGCCACACGCCATAATGCTT TATGTGTTCAAAGAGCCTGCGGTCACAGTCGGTATTGTTCCGTGAATGTG GGAAGGGCCTGAGCCGTCTGACCTGCATTTTCCAACGTCCAAATGTGGAA AACCGTGGGTCAACGTTAGTCACACATCTACATATGTGAGAGCCTATAAT AACATCGGCCGTGCTGAACCAGATCATGTTGTGGCTGTAAATCCATGATG GATCAGAAAAACAAATAAATGTATTTATAGTTAAAAATATGAACAAAAGC CGTAAAAAATATATATGCAGCAGCAGGACTTGGCTCGCCTCGCCTTACCA TACGCAGTCACCCATCACCTCATCCAGCCGTTGCTGGTCATGGCGCATAG TAAATATCGAATGCTATCGACGTTATGCTTAAAGCCATGAGTTCCCTGTC GGTGCTGCATGACTGGGTTGGCTCTATGAACAGCGGTAGCTTCCTATCCC CGTAGTCGCACCAAACGCGCTGATCCCTCTTTTTTCAGGTGGGAATCAGG TGGACACAAGCGAGGGTTAACAAGCCATCTGACACAAAACAACCGTCGAG TGCTGTCAACGTTGTGCGCAGAGCCATGAATTCCCTGTTCGTGCTTTATA TACTGAGTTGGCTCTATGAATGACGACAGTTTCCTTTCCCCGTAAATCAA AATATGTTGATCCAGGAGTCAGGTGGACACAGGCGAGGATTAACAAGCCT AATGCTTTCTCTCTACGTGGAATGTAGATCAGGTTTGACCAGATCAGCTA CAGTCAACGGTAGATTCAGTACAATAAAACTCTGTCGATATTGATATAGC GCTCTTGACGGTCCAATAAAAACCTAGGCTTGTCGGGCTATTCTTCGTAC CCGAATCTAAGGATCCAGGTAGGAAAATTACCCCGTAATATCGGACAGAA GTCTCTCCTACTCTTCTTACTCTGTCCCATTAGTTTGTTCCGGTAGCTAT TTAGCGCATAACTCTTCAGGATGATGTCCGATTTCAAAACGGATTATCGC GTTGGATTCCTTGAAGTATTTCCCGTCTGAGTAAACTATCGTATTATTCT TGGTTAAAACCATCAAGCCACCAGTTGCGCCTCCGCGGCTTTTACCAACC CCTCTTCCCGCTGCCTTTTTTGCGCCTGTGTGCTCTACCTCGAAACCGGT CCCTCCCATGGCTCGCGAAACGTGATGGTACTCTTTGAATAGAATTGATC ATACTCCATCTACAAGGTCGTCGACCGTGCCGTAACGCTCTCCCCATACC CTACTCTTCAGAGACGCGAAAAATATCCCAAATCGGTGATTGTGCAGGCT GCGTTACGAGCTTCACACTCAAGCTCCCCTCCATCCCCGCGTTGTTCAGG GCCCGTGGCGTACCCTTGCCCGTGTGGGGCGTCGCGCCGTCTTGTTGCGC CATGACCTCCCCCTCGAGTTACCACGTCTTTTAGCCTCCGGCAAGAGGTC GTTGATGTACCACTCCCGGTACCATTCTGCACCGATGGTGACGTCGACCT CGTACGTGTCGCCCCTAGCGCGCCGCGCGGTAGTCCTATGTGCCTCTCCA GGTAAGGTAAGAACGATACGTAGCCTACGCGCAATCCAAGAAAAAATATG TACGCCATACTACCAGATCAATGTAGATCTGCTACCGATACGTAGGTACG GTATGTACGGGTCATGGGTCGCCAGATGTGTGAACCGTTGTTGGCGCCGT TTTGTCGCCATATATATAGCTCGATGTACTATCCTCCCCGCAAATGGAAC CAAAGAGTACACCTATAAGGGTCGATAATAGCCGTTACCTGATCGTATGT CCAGATTTGTGTAAAGTGAAGCGGGGGCATGTGTAATAATTGTAGTAGAA TGGTGAAGTGCGGAACGTCTGGTTTTTTTAGCTCAATGTAATACCCTCCC CACAGATTGAACCAAAAAGTACACCTGAAAGGGATTGATATCAGCCGTTA CCTAATCGTATGTCTGGACTTGTGTAAAGTGAAGCTGGGGCATCTATACT AATGGTAGAAGAACGGTCAAGTAGGAAACTGTGCAAGGGCAGCATTGCCT TCTTACGGCCACTCCTAGCAGCAGCGGAAAATGGAAAATTCAAATTTCGG ACATTTTCGAGACACGGGATAAGCTCCGCAAACCAGGCATAGAACTATTT GGGACCTCATTTCGTTTGCGCAGTGTTACTATGATGACCAGGAGGCACCC GAGGGCTCTTGAACTCGTGGGCAGAAGGGCGTTGGGCGTGTGCGCTCGGT AGCACGTGAACTGTCGAAATTGAAACATTGATATCAGAATTTTCAGTGCT ATTCTAAAATCAACTGGAAATATCAAATTTCGGTTTTTCCGCTGCTGCTG GGAATAGCCCTTATTACTGTCCGCCCCATAATATTGTCTTGTAATGTGCA TGAAATCTGCTTGGTGATGTGAAAATCTTCAACTTGCGTCAGATGAATAT TCCTTCAATGGAGAAACTTTGGTAGAGAGATAAAAAAAGAGCATTCAGTT TTCCGATTGGTCGAAAAAACATTGGACGTCGGCTGATGTCATCCACGGTC TTTGGTGCCTTTCATTGTCCCTGGCCGATTGACATCATTTCGGTCACATT TGTCTACTTCCGATTTACATCATTTCGGTCAATCTATTTGCATCTGAAGT AATTTTCGTGCAGACTTTTCACTATGAACGACGTCAGTCGATGACGAGGA TTTTTTACCAATCGGAAAACTGCGTACCCCTTCTCTCTCTCTCTCTCTCT CTCTATTGGGTTACGTCATGGACGTTTTGGGAATTGTGTGGATGCTCATG ATCATCGATGAACATCTAGGACAACGTGTTCGTCATTTTTTTTGCACGAC AGCTCAGCAGATTGCTCGATAAAGAGACAATGGCGGGTCCTATCTGCTAC TGGGGTACGTGCGACTGTTACTACTGTGATACGCCTTCGGTCACAAAGAA CTCGAAAACCCGGCTGACCCTGCGCCACCTGTACGAACACAAGCGACACA GAGAACACGAACTCGGGAGTAGAAACAACCAATTTACCTACCTGCTTCTA ACTGACGGACAGGCACTCGCTGTGTACATTCAGTGGATAATGACCATGCA CGTGGGAAGCATTGTTGATACATTGGTCGGACCTTGGTTGCACGACCGAT CAATATATTCATATCCTGATATATACGGATATACAGTAGTTGGTAATCCA TTGATGCCGATACACAGTCCTAGGAGATTCCATCATCGGTTCCGAACTAT CAGAAGGGCCTTCCGGTGGAGTGACTCTTTAGTTTCAAGGGCCAAGCCCC AGAGATCTTCATATAGATTTCACCCCTCGGACAACTAAAAATACCTTCAA ACGGTTTTCGCAAAAAACTGCAAGTGTTCACCTGAGTTTCAAAATGAGTG AATGCATACAATACAGTACCAACCCTTGTTCATTCGATTTACGAGTATTG TTAGCGGTCGTCGACGGTCCGGGGCACATACAGCACACGAACTCATTCTG AAGCTCGGGCGAATACTTTCCGTATTTTGTGAAAACCATTTGCAAGTATT TGTATTTGTATTTGTAGGGGGGGGGGGGGCGTGATATATTTACAAATCAA CCGAGACCTGGAAAAGGCTCAAGAGAAGTCTTGCTGTGTACTCCCTTGGT CACGATGAAGGCATTCCCACACACCACGAAACATGAGTGCCACGGATCGG ACGCTCGGACGCTTCTGTGGACCACAAGCGCTTGCGTAGTATGCCCGGTA TGATGTCACGATACAACACCTTAGCAACACACAAGAAATCCCGCAGCACG GCACCGATGCTCCTAGGCACATTCATGAAGTACTACGTCGCACGCTCTTT TTTCGTCCTATTCACCAACAACCCACCACAGCTTTACACAATTGTTGGCA AAGTCCACAGCATTCTCATTTCAACACTACATGTTTTGCGTTTTGAAGCC ACTTTCTCTTTTTTTGCCCGTCGAGAAAAAAGTTGATTGGTTCTTTAAAG CGCTAAGCTCTGGAGGTGCGTGTATTTCTCTGCTTTCAAAAGAGATGACG CCAAAACGCACAACATGTTTTTGGCCTCAGGCGGTATCTTCAGCGAGGCC CCCTACTCACGCGTCTGGGGGCATTCGGCTCGTGGCAAACCTCAAATCCG TTCTGCCGCAACCACCCCACTTGTTGGAGTATGTTTGTGGGACTGCGACT ATCAGTAGTAACAACCGTAGAAGTGACAGTGTTGTAAAGGGTGGCGAATT AATACCTGTCATATCCACTGAAAATCCAGACTATTCGACCATCCGGCACA TCCGTGGAAATGTTCGGATCCACGGATTATCCGTAGATCGATCGGGATTA CATTGCCTAAATTCCAAAATCCATGCCATGGCTCCTTTTGCCGACGGAAG TATCTACCCAACACTCCGTGCCACCGCCCGTCAACCATTTGCTCGTCAAA GCAATTCGTCGATTGCACATAGTCACACGGTAGACGATGCCCTCTCCAGA GCACAACTGATTCATTGCTTGGCGACCCCGCGTTCAGACGCACTCTCGTA CACCCGCTTTCCTCATGTCTACCGTGGACATGGTAGCGTGGTGTACGCCG CCCGCCCGAGATGAATTCCGCTGACAAAAGACACCGTGAATCAACTTTAC ATGCAAATTCATGCGAACCCCCCCCCCCCGTGGAGTCCATGGACGGTCCA TGAATATTCTATGGAAATGAAAATATGTGGGCTGTCATTGATGTTCATAG ACTGCCATTACTATTCATTAACTGACTGTCACGGATACCCACAAAGAGTG CATTCCGTCTCCACAACTATCGATGAAATATTCATGGCATGTTCACGGTT CTCTACGGAATGTCCGTAGAATATGGTTCGTGAAAAATTTGATCGGCCCT CACGCGAAGCTTATATACAGTCCGTGAATGCCCATCCAAGTCCATCACAG GATCCATGGCTGTCCATGGATACTTTATGTGCGTGTACAATTCTCCCATG CCCTGGAAAAAACTCCTAGAAGAACGCCACTATTCGCATTGAGCAAACAC TCTTTCCAGCGGGACTCATGTCCCAGCTTGTTGTTGACCCCCTCAGTCCT CTCAAAATGGAGTGCGGGCGCATTTTCAGGACAGGGAGGGACACCGACTT GGGACAGACGACTTATTTTTTTCGGCGGGGATGACATCACACCAGCCCCC CCCCTATGAGGGGAATATAATCTGCGTAACAGGTAATGAGAAATGTACTA CGAGATGAATGACACCAAGAGACGCTTGGAGGGAAAAGGGGGTCACAGGT AATCATGTAAATTTCAACCATTGCACGTTCACTGCTGGTTTGCTGTACTG GAACGCCATATGCTCTACAGGTGATGTGGAGGTAGTGCAACTGGCAGGCT GCAGTACATACACATCCGTTCCATCGAGCAGTTGTAGTCAGCTAGAGAGC GCGGACAGCATGATACAGCCGGGAACATTGCGCATGGTCACGAAAGAAAG AGACAATGAATAAAACGCATCCAACAGTCACTGGGTGTGCTCTGCTCTAG CACTGTGCCTATGAACTAGGGGTAACGACAGCAACATAAAAAAAAAAGAG AGAACGGTTGACAGGAACCAGCATCTCCTGAGAGTTCCCGAGCGAGCGAT AGGCGTTTGATGTATGACGTCCTGTCATGCGTGATGGTACCCACAGCTGC CGCAGCTCTGACAGCCCGCCACAGTCGTTCCCATCGGAATATGGCAGCAC GAGTTATGGCGTCATTGACACGTCGTTGTTGGGGTTCCTGAAAAATCGTC GTTGCTTCTCTGTCAACATTTTTGTTTTTTCTACGAGTCAACAATGAGGT ACAAACGCCATGCAGGAATATTAATGATGGGAGGAGTTCCACCTTCTTCA TCAAAATTTCAATTCCTTTGGTCCCGAAAGATCGACTTTTACGAGTGCGA CGGGAACAGACAGCAGCCGATGGGAACCAGCGTGCAAAACGTTGATCGCT GACTCTGAAAAGTGAGGAGTACCTTTCGATGAAGGTTTAAATTAAACACA AAAATAAGGTTTTCAACATGTGACCCTTCTCTGTCGTAGCCGTCAAATAT ACTCACGGTTGACGAAATTTTGCGTAAGCAAGCCAGCCTAGAGACGAACG CAGCCGCCACGGAAAAGTAGAAAAGCTGTTGCCGTTTACGCTTTTTTTTT CTCTTTCTTTCGCCCATATCATGAGCAACCTATGACACAAGGTGGGGTAT TTTACGCGAATTTTCATGCGGAATTCGGATCTTCGTGTCTACTGAGTTTC TGGGTACCGTCAAAAATACCAACAGGAAACAGTCAGCGAACGTTGGAATT AAAGCATGTCTTATCTGTAAAAAAAAAACAAGAGAAAAACGATTATTGAA TTCTCGTCTCTGATTATTTGAGCGATATAACCCATCCAAAGGACGTGGAT TTTTTTACAAAACATTCTTGACTTGGAGAAAATAGAAATTAATCTGTACA GGAACGTAGATACTCACCAGGTAGGGAGCACTGCAAACTTGGTGAACGGA CTGCCGCACTGCCGGCCACGGGCGCGGGCGTAACAAAACGTAGCTCTTGA TGACCTGAGCAACGTGTGCGCGACGCCGGCTGAATTCGTGCAAGAATGAA GGAGAATCGATGTTTTCAGGCGCTCGTGGCAAGCCAGACGGACAGAAAAA ATGTCAAATAGGGCATATTTTGTACTATCAAATTTACATGGACTGTTGGA GCTCATGAAAAACTGGAACAATTGCTTCAAACAGAAGCTGGCGTGTGTAG CCGAGCAACGGCCGGGTTTGAAGCTAGTATGTGTGTACTGGGACTCTATG CATGTTGTTTGGGGCCCCCTGTGATCAATGTTGTTATGTTGGTACCCCCT GTTGGAGAAAATGGCCAAACAAAAAAATATTCCCACGATTAATGAGTCGT TTGGAGAATCATTTTTTTGGTCCAATAAGACACTCTTACGAGGACGCCGA GGTGAGATTCGTGGTAAACGAGATATCTTGACCACCTTTTCTCTCATATC GACAGCGCGCCATCGTACAAAAACATTCTGTAAATAATATGCTTGCGAAA TATAAGTTGGTCGTGATGTGCATCGTCTGAGGCAGGTGCATCATCTTGGA CACCATGCGGCTTACACGTCGCAGCTGAACACTGTGCTAGAGCAAATGCG TTGGAATCCGCAACTCAAGCATCTGGCCAAGATGGGGGTGGACGAGCTCT TGCATCATCTCGACAGCGTTCCTGAAGGTAAGCGTTCGTCAAGGGGTTAG TATGTTGGGTAGGTGGGCGCTGTCCCATAGCTACAAGGTTTGCTGCGTTT TTTTTTAATCCCCAGGAGACCAGAGCGAAAGCTTCTGTATTACTTATACT GGGATAGTTACGTACGTCCAGCTTCGTACGCCAGTTCTATTATACCCTGT CAAAATATCTGTGACTCCGCAGGCCAGTGCCTCGAAGGAGACTACTCGCA GCTTCGGCGCTCATGTATCGTTATCAAACACACAGGTAGTGTAGGGCTAG GGTCATGAATGAGATCCGCGTCCACTTAAACCTTCCAGATGCCTCCTAGA TTCGCCCAAAATAGTGGCTATTTTACTTATCTGGTGCACATGATAAATAA CATTTGTTTGCCGAGAGAGACAGAGGGGGGAGGGTGCACGAGGTTCAATC AATTGCTGCTACCTCTTCGTATTTAACCGTGTTCCTTCCCATTGTGTGCC CGTCTACTTGATTGTCGAATAGTCGATCTTTTCAAATCCGAGACAAGCAC CTGTTCTGTATTCTTGACGATTAACTGGCGCTTACGAATTGTCAGATGTT ACGTCGATGCTGTTCGTGTTACTTGTTTCAAACCGCTACGGTATCGCTTG TGTTGCTGCAAGTAAGATGCTAGGATTTTTTCCTCGAGTATCTGTCCCTA GCGGTGGGTACGCTGTAGACCAAAAGGGTCAGCCTTTGGCGGCGCGTCTT GAGTCGTGCTCGTTGGGGGTGCATTTCGTGCACATGGGTGATTTCGTCGT CGGCGCAAGTCTCCACACATTTACAATAGTGAAGCAGACGTTGAAACAGG CAAATGGTCATGCACCCAGACACGAAGTCTTGAAAAATGACGAAAAGCTG CGCAAAGGGAAGAAAAGACCTGGGAAGGGGGAGACGATGAGCCACGTTTT CATACACTTACGTTGGAAGGCGATGGCTCCAAGTATATATATTCAATGCG AGGTGCGTCGCTGTGTAATATGAAATGCGGCAACACCTTAAATAGCCAAC AGGTACAAAACCTGTAGTAGTTCGAACTGAGACCGTTTGTCGTGGCAAAA TCAGAATCAATGGTCAGGATCCATTTTTTTATGAAATTCTGACGGGAAAA AACGATACACCGTAGACTATAGGGGATACCACCCCCCTTCCTCGTGATGG AATTTCGGCACCAAAAATGTTACCACCAGTGGTGGTACCGAGGGGGGCAT GATATCCTTCGTGTTCGCGTTGGTTATCGAAGCGTGTCTCGCGATTTGGG GCGTTAACATCCCCGTTGCCGTGGCAGGGGGCGGGTGATAACAGGAACGG TGATAGCAGTCATTTACTATACCAGATTGCAGATTAATGTTTAAAATAGA TGTAGGTCCTTCAACCTTTGAAGAGTTACCTGGCACCTTATCTGTGCTGT GTGTACCCGAAAAAAACAGAGCGCAGTAAGCTACCGATACTTCGAATGGG AAAAAAATGGTGTGTGAGAGGCACAATATGACCAGACCGAAAGCAAGAGT CGATAAAAACATTGTCGTATACTCTCGACTTGTCTATCTAGGGAAGGAAT AATACAGAATTCAATTAAGGTCTCATATTTCAGAATTACGATCGTTTTTT AAATGTACACGTAGGTTGTCCTAACCCTGGGTCGTTAGTCCATTGCCCGG GGGTGATAGTGTGCGTTATTATCGAAATAGGCGGAGTGATTGCATGTGTC ATAATCCAGTGCCTGGGGGAGTGGTATCCTCTGTATCCCTGGTGATGACT GATTTCGTTTGGAAAATTGTCAATAAAGTAACATCGAGGGTGGTATTCGG GGGGGGAATCCTCAGGCAGGGGTGTTTTCCCCTCCAATTTGCGGTACCAC GCTGTAGGATCGGTCAGAATCGAGATTGGAGGCGACAAAAAAATGAATTG CCTCTGGTTTCGCTTTCCCAGTCAGAACTCGGGTTAAACCGTAAATGGCG AGACTCCGTCAGAATTTTAAATCACAGGAAGTTGAGAATACACCAACGTT AGTACCAATTTACAGACAGTACTGACTGTACTTGAGCTCTGTGGCAATAC AGTGAACGAAGATACTAAAGCAATCAATTAGCAAAGGAGGTGGTGGTGAG AGGGGCGAAGTTCCGAGGAGCGAGGCTAACGAAATCAATACCGCCTGTAC ATTTACCATGAAGTGGATTGTTGTTGTTCCAAGGAAGGAGTGCAGCAAAA GCGTCACTGACTGTACATGTATGTACAATGAGCTGGTGTGTAGTTCACCT GTCGGAGGAGCGAAGACAACGAAGACGATGAATTGATTTATTCATACACA CGATGAAATTAAGTGTTCTTTTTAGTGTGGTTGGATATTTGTGCTCTGGC ATCAGCGACAGGCGGGTTACCTAGGATCTGTTACCTGTGCCTTGGCGTGG GCTGCATCACATTTCCATTTCTTTTGTGAAAGCACACTCGAAATGGATAC AATATTTTGTGTCATGTCCATTGGCGCCTTCCGCTCAATTTCGATTGTGA TTCCCGGCAATAATAGATGACTCGTCAGAATTTGCCAGAAATAATGTATT GCCATAGCGAACGGCCTAATATTATGCTTTTGGGGACGCTTCGGGTGCGA ATCGCACGATGACCACGGGGTTACAAAATTGTCTCCTCGAAGTAATTAAT GGTTAGCCGCCATGATTCCGTGGTCGTAATTACCCGCCAGCGGTATGTTG TGACTGTTTCACGCCGCTGCTCTGTGTATTATATACAAATGTCTCGTCAG TCAGCGAGATATCCGGCATTTTCATCGAAACAGTTATGGACGGAGGGGTT ATCGCTGTCGACCGAACGTTCGAGATGTCCCAGTTCATCGCTTTCTTCTC CGCGATATGCCGCAATAATACGTCGAGACATGTCTTCCAGGTGACAGTTC CAAGAGATCCGACAAGGGACTCTGGATGTGACTCGTCCTCGTGCAGGATC AATATATGTCCTGATGGCGTCGATTCATCTTGCCTACACGACAGCTCGTT GAGACCCGAAAACGCACTCTAAATGCGTTGCATCACGCCGCAAAGATAGG TGCCTAGACCCTTGAGATTAATATAAACGTACCTTTTGTGCCGTCGTACT GCACTTCTATGCATTTACTTCAAGGTGCCCATATAGTCTGTAGCATATGA CTGTTCAAATATATTACTGCAGTCGGTAGGAAGGTAGAGTATGAGGTACG TTGAACAAGTGAGGAGCGACAGCTGGACGCTGCAAATACAGAAGATCGAG ATCCTACCTTTAGGGTAATATATTCTCGGAGACAAGATCTTATCTTAAGG GCGTGGACATTCTCGGGGACGGATTCGGATAATGTATTGAAGATTGTTCT TTTCGGGCAGATATATGTGTGAATCTTGTTCTGATTGCAGCGCAATGAGG ACAGATTGCAGCAAGCTACTGTTACATATCATTTGGATAGCGGGTCGGTA ATCATCGTTGAACAAAATATTGCAACGGATTTATTCCACGGATCATCAGT AAAACGGATGTATCACCGTAAGAGGCAAGATCGGCGGATTCTGTCGTTCC TACTTTCCTGAACAACCTCAAGGATTAAATACTAAAGATATACGAACTAC AAAGGGATCTCTTTGTGCGTCGCACGTGTCAACCTTTTGGTGAACACCAA GGGACCTTTCCACGCAGCTCCAGCGTCGCTTTGCACGTACTTGTCTGTTT GCTTGTGATTGTGTCACACACAACAGGAAAATCCGTGTTTTCACCAATAG ATCGACTGTTTCAATTAATATAAAGCGAACCCCCTTGAGAAGTTCATGGA CGTCATGAATAGGAATATCACGAATAATTCGCCGGTGAAAAAATCTTTGA ATTGATGGGAATATTAAAAATATGTATTTTTTACGTTTCTTTGGAAGCTA TTCTTCGTACTGCTGCACCTCGACAAAATATATGCTGTCAGCTGCTACCT CGACTTTTACGCGGATATATATATATTTTAAGCTAAGACCATTCTCTTCC ATTTGATTGTGGAAACATTTTGAAAGAGATGACGGTGAAATGCAAGCTAC ATTGCCAAAACAGCATTATTATTACTAGTAGTAGTAGTAGTAGTAGTATT ATTATTATTAATATTATTAGTATCATTAGTATTATTAGGATTATTAGGAT TATTATTATTAGGATTAGTAGTATTAGTAGTACTAGTAGTATTATTATTA TTATTATTATTAATATTATTATTTTATCATCCGTGATGACCGCCCCTCTT CCTGAATAGTTTGGCTTTCCAACATAACACCCTATTTCGCGCAAGTTATG GCATAAAAAAAATGTCTTGAGGGTCCGACTTTTGTATTTGCTAAAGGGGC ATATCTTAGTGAGGAAAGAGACTTGCGATTATTTAACATGGCAATATTAT CGTCTCGTGTCCGATATATCCAAAGTGCATAATTGATGCACAACGGTTCC CTGCGCATGCGTGTAGGCATACAATGTTGACCAAGCTTCCTTTCAAGAGT TTGCTTCACTAAAAACTTGAGAAAAACTTGAGAAAAAAACAATTACCACC TATTGACGGAAGGAAGTTCCGTACCTTGCAAGGTAGCGAAGAATTTGCAG GGACTCTATGGTTGCTATTTTCGTGCACGACGGAATGGTGCGGTTTTTTC CGAGGTCCCCCAAGCTATGCACAACAAGCATGTATTGTGAGGGTTACATG ATTTCACCACCGCTACCCCCCTATTTTAGTGCCATACGGGCATACTACAC AAGGCATCGAGTATTCGAGATAGAGACAAAGTGTTCCTACCACATCCACC GCCCCCGCTCTTCGGATAACCCATGCAACAGGAGAAAAGCCCGACACTGC GTCCGCAGCAGTGCGTTGTAGAGATGTTGATTATAAAGTATGTACCATTG TATTGAAGAGAGAGGGAAGCTGAGGAGTGAGCATCATGGGCTGCCGAGGT TCATCGTACCAACACAAACCTAAACAGAAGATATCCCAATCTTACCTATT ATTTTACCACCTTTCCTTGGTACTTCCTACGTTGTAATATCCCGAGGACA ATCCAATCCTTACCCACAGGAATACCCTACCACTATTAATCGGTACGTTC CGTGTTGTAATGTCCCGAATACAATTCCACGAATATTCCGCCGACGCGTA ATCATCGAGCTACATTATTGTTCGGTAAGACAAGACATACGAAGACCCGC GAGCAAAGAAACGCCACCTACCTGATATAAAGTGCCGTCGTGCAAGCCGG TTTTTCAACCTTGAATGAACTAACTTGGCATGTAGTCAGTCGACAGCTGT GTTCGTCTATGCTTCTCCAACCTTGATGCTGCTATGTACCCCTTTTGTCT GTTCTTGTGATCATGCAGAGTACCGAGACGCTGTCCGCCGCGCTGGGGGC GGTTTCGTGAACCACGACCTGTTCTGGAACGTTCTGTCGCCTTGGGGAGG CCACCCACCGGGGCCAGACTCTGATACTATCCAGGTACAAAGAGACAAGA GATCATCCTCCCGGTGCTACCAGCTGACCCAATTCATACATCCACGCGGT GGTACCCCAGCCACGCACCTACCTGGGGGATGGTCCTGAATTATGGTAGT TGCCGAGTTGCCGCGCCTCAACCCTTTGAGACCGCCAGCATTACACCAGA GTAGGTTCCGGCGGCTGATTCGTATGTTGTTGGTTGTTCGGCATGGTGTT TGATTCATTTCAATGTCATGACACTGCTCGCATCAATGGTTTTGGCGATG CAAATGGAGACATGCACATCTGAGACGCCAGTCGATAAGGGCATGGAGAC CACGACAAAGGGGTATGGGGACACGTTATCTTGAAGACGGGAAATTGCTT TTGTCATACCCTTTTGTATTCGTCAGATTGCACGAGAAACAGGCTTGAGT CCAAGTGTAAATAACATTTAGTACGAAAAATAGCACTTTCCGTGTGTGTA TCAACGCGTGGTCTGTAAACCAGGAGCGTCACTTGGCCACGGCGATCGAC AAGTCCTTCGGATCGTTCGCGGAGATGCAGTTCGCGTTCTCCAACGCTGC TTCCTCCTTCTCAGGTTCGGGGTGAGTGGTTGACTGTCCAATGACAGTAA CAGATGCAGGTGCTTGCAAACGTCAAACATGCGCATATACCGGCATTTGT TTTTGCGAGATTCCTTGAAGGAAATCAAAACCTTGAAAGACCTAGTACCG GTAATGCTTCAGCTGAGCGAAAAGGCGACGAGAGAATGTGTGGGGGGTGG CGGAGAGAGAACCGCGTAAGAAATATTCGTGCACACGTTTCATATCAATT CGCAGATGGTGTGGCGGGGGTCATTTGTGGGAGAACAGTCTTCGTTTATT GGTAGTATAATCGAGTGTGTTTTACCTACTTTCTGTACAACCTGCTGCAC GCCTTTTCGAACCATTTAACCGGAAGCGCAGCGATCCATTATTGACAACG GAGGGGCGTAGCACATTATATTAAGCCATCACCGACTTGGAAAAAATGCA GGAAGTTGCGCATGCCCGACGAAAGATCCCAATGTAAAATTAATTTACCG TTCTTGGGAGAGAACTGAAAACGTTGGATGTCAACAGGCTCTAAGGGCCG TTCTAACCGAGGTCGTGCTTTGTCTGATTTTTTACCGTTTCCGAAAATTG GAAATTGTGATACCAAGCTGAACATCTTAACGACTTCGATCGGTGTATCA TACGTACAAGGGTAACGCGCTGTAGAGTGGTTCCGCACCTTTTCCGCAAT TTTGAGCTCACTATCGCAATTTCGATTATTTCGGAAAAGGAAAATCGGAA AAATCGGACTAAAAATGGTCTTGTCCAAAATGGTCCTAAATAATATGCAC ATGCGTGAATTTTTTCTGGTGCGAAGAAGGAAAAAATGGCTCCGACGCCT CCTCGTATGTTGTTTGATTTTTCCATTCGCGCCCAAATGGGCTATAGCTA CTTTCTCCACGTTGTTGATACTGCTACAACCTGAGGTAACCATGGTATGT ATGTACGTACACTTACGTTGGCAGGTGGGTGTTCGTGGTGTACGACCACG ACGAGAAGGACCTGGACATGGTGGTGACGAATGGGCAGGACACGCCCGCG ACAAACCCGAAGACGACGCCCATTCTACTGTTGGACGTATGGGAGCACTC GTACTATCTAGACGTGAGAGACAGAGCAAGTAGAAGCAAGAGGGGTGTAG GGGCTAGCTGGTCTTGCGGTGTTGTGGAGAAGGCAGTGAAGGTACCTCGA TTTGGCGCGCGAACTGCGCGGGCTAGTGGCATACCCGAAACAAACAAGAG TCCTGTTCGTCGATGTTGATGTAGTCTTTCACGGAGTCCTTTTATTTCGG CGATGTTGTTCGCTGATGGTTTCACCTTGTTTTTTTATGTCAACCTGAAA CGGGTGTATAGCAAAAGTGTCTGGGGTTTACGAGTCAGGTGCTATATGCT CTTGTGGCGTCATCATTACGTTTTTTTTCAAATGGATCGGTCATTGGCGA AACTTGCTGTAGGCTCATGTTTTCGTTCGGCGAGAAACTTGGGACGTTTT TCAGTTGAAGTTATGTAGCAATGTTGCAGCCTCACGGGAAATGATAGATT TTTCCTCTCAGGCCGCAGCTGTACCCCGAAACGCCACAAGTGTGTGTATT CTCTACGACTAGCCTCCGCCTACAAACCTGTACATAGCTTTCTATATCCC TCACCTTTTTGTCACTAATAATGTGCTCATATTTTTCAGTACGAGAATCG CAAGGACGTTTACATCACCCATTTCTGGGGAGCCGTCGACTGGGCGAGAG TGGCCACTCGCTACGCGGAAGCTTCGGGTGAGGTAGTGCCGGACGCCTTG CCTTCCCCGGAAAGGTACAGTGGGTGTATTGCCGGGCAGATGTTATGCTT GGCATGAGGGGCGCACGTCCCCACAGAGAGCGAAAGCGCGAATATGTTTT TCTCGGTGTTTTTTTCTGGTCTGCAATCAATGCCTTCGACTCATGATCCG CCACATGAACCACCGAAGCAACGAAATTGCGTTGCTGCAGGCTGAAGCCC GTGCACTCTGTATGTCTTACCTTGAAGGCAAACCTCGTCTTGGGTCCATT TTAAAGGACACTTTATGTCCGATTTTTTCGTTTTTCCCATTTTCCGAAAA TTGGAAATGGCTACAGCGAGCTGAACAACTTGACTTTGGCCAAAGTGCAC CAGAAGTATGAGGGCAACATACTGTGGAGTGGTGTCGCACCTTTCCCTCA ATTTTTAGCCCGCTATCGCGATTTCCAATTTTTTGGAAACTGAAAAGCCG AATAGAAAACCCGACCTCATTTAGAGCGGCCCTTACCTGTAAAGTAAACC GTTGTTGTTGTTTTTTTGTCCTCCTTTTCCTTAGCGCACCACTGTATTCC CCCCTCTAAATGCTTGCCCCGTACGCATCGTGTGTATACTTTTTGTCGTC CACTCGTTTATGATTGGTCAACGTCAGGCGGGAAAAGGAGGCTATCGGGC TGACCCCAGCTGCAGATGACGCGAGCAAGGCGCTATTGAAAGAGGATTTA TAGAGGTCGGCTGAGGGCATGGGTGGCAATATATAACAGGCAGCATAGAC GGTACCCGCGGGCTGAAGAGCTGAAAGGCACGCACATTTCGTATTTGACC TGCACTAACGTACGTGGCTGCAGTCGGCAGGGCACGGTCAGAGGAGGGTG CAAAGAGCAAGGGGCGGGACGGCATTGACTGCGGCGTGGGGTGGAGGGAG GGGGGTGTCTTTGAACATCAGAGGTTTTTTGTACTAGAGATCTACATATG ATGGATGGCATATGTGTGCGCTGATGTGTACGTGGTTTTGGTGGAAGCAT TGGATTGTGTTGTGAATTTGGAGTAGGCTACCGCTCTGAACTCTCTTCAA TAGCGAGTGAATAGATTTTAGATGACTTGTGCTACACTGCTATGTATGTT TTTGTGTAAGGACGAGTTGGCGGCTACAGAGCAGAGGGTAGCCGCCGCGT AGATCGGGTGCGGAGATTCGTAAGCGTGAAGGGTTGATAAGGTGAAGGTT CGTGCAACTACCACAGGCTGCTTGCAGTGCGGATGCCTCGATATGTCGTT GTTACCGCAATTCTAGTGTATGCTGCTATTGGTTTGTAACCGTCCCGACC AGTGTCAATGTTTTGTTTAACGCATCAATACGGGGTAAGTTTTGTCTTCG TGAGACATGAAAAACAACAGGATTATCCCGATGTATCAAAATTGTGATAT GATAGTTGTGCTACTTTCGGATCCTTGAACGCGGGTAAAGGATGTGCCCG AATGGAACACGACAACGACAGAGGTCATGGTAAAATAGTATCTTAACGAT ACACAGGTGACACGACCCCGCTAATTTCGTCCTGTTTTCGTCTATTTTGA GTACAGGGTACAAGCGCAAGTACCTCGCGGCCGAAACATCGAC
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig1814:2210..20452-

>mRNA_H-paniculata_contig1814.4401.1 ID=mRNA_H-paniculata_contig1814.4401.1|Name=mRNA_H-paniculata_contig1814.4401.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1680bp|location=Sequence derived from alignment at H-paniculata_contig1814:2210..20452- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGCGCTATGATGGGCTATGGTGGACAGCATGTGCGGCACTTGCGGC
GATCAGCGGGGCAGAGGCCCAGAACATCCCTGTACCTCCTCTGCCCTATT
CATACTCAGGACTCGTTCCTTTCATCTCCGAACACGCTTTGAGGATGGCG
CGCTATGATGGGCTATGGTGGACAGCATGTGCGGCACTTGCGGCGATCAG
CGGGGCAGAGGCCCAGAACATCCCTGTACCTCCTCTGCCCTATTCATACT
CAGGACTCGTTCCTTTCATCTCCGAACACGCTTTGAGGGTGCATCATCTT
GGACACCATGCGGCTTACACGTCGCAGCTGAACACTGTGCTAGAGCAAAT
GCGTTGGAATCCGCAACTCAAGCATCTGGCCAAGATGGGGGTGGACGAGC
TCTTGCATCATCTCGACAGCGTTCCTGAAGGTGCATCATCTTGGACACCA
TGCGGCTTACACGTCGCAGCTGAACACTGTGCTAGAGCAAATGCGTTGGA
ATCCGCAACTCAAGCATCTGGCCAAGATGGGGGTGGACGAGCTCTTGCAT
CATCTCGACAGCGTTCCTGAAGAGTACCGAGACGCTGTCCGCCGCGCTGG
GGGCGGTTTCGTGAACCACGACCTGTTCTGGAACGTTCTGTCGCCTTGGG
GAGGCCACCCACCGGGGCCAGACTCTGATACTATCCAGAGTACCGAGACG
CTGTCCGCCGCGCTGGGGGCGGTTTCGTGAACCACGACCTGTTCTGGAAC
GTTCTGTCGCCTTGGGGAGGCCACCCACCGGGGCCAGACTCTGATACTAT
CCAGGAGCGTCACTTGGCCACGGCGATCGACAAGTCCTTCGGATCGTTCG
CGGAGATGCAGTTCGCGTTCTCCAACGCTGCTTCCTCCTTCTCAGGTTCG
GGGAGCGTCACTTGGCCACGGCGATCGACAAGTCCTTCGGATCGTTCGCG
GAGATGCAGTTCGCGTTCTCCAACGCTGCTTCCTCCTTCTCAGGTTCGGG
GTGGGTGTTCGTGGTGTACGACCACGACGAGAAGGACCTGGACATGGTGG
TGACGAATGGGCAGGACACGCCCGCGACAAACCCGAAGACGACGCCCATT
CTACTGTTGGACGTATGGGAGCACTCGTACTATCTAGACGTGGGTGTTCG
TGGTGTACGACCACGACGAGAAGGACCTGGACATGGTGGTGACGAATGGG
CAGGACACGCCCGCGACAAACCCGAAGACGACGCCCATTCTACTGTTGGA
CGTATGGGAGCACTCGTACTATCTAGACTACGAGAATCGCAAGGACGTTT
ACATCACCCATTTCTGGGGAGCCGTCGACTGGGCGAGAGTGGCCACTCGC
TACGCGGAAGCTTCGGGTGAGGTAGTGCCGGACGCCTTGCCTTCCCCGGA
AAGTACGAGAATCGCAAGGACGTTTACATCACCCATTTCTGGGGAGCCGT
CGACTGGGCGAGAGTGGCCACTCGCTACGCGGAAGCTTCGGGTGAGGTAG
TGCCGGACGCCTTGCCTTCCCCGGAAAGGCGGGAAAAGGAGGCTATCGGG
CTGACCCCAGCTGCAGATGACGCGAGCAAGGCGCTATTGAAAGAGGATTT
ATAGGCGGGAAAAGGAGGCTATCGGGCTGACCCCAGCTGCAGATGACGCG
AGCAAGGCGCTATTGAAAGAGGATTTATAG
back to top