mRNA_H-paniculata_contig18139.4400.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig18139.4400.1 vs. uniprot
Match: D7FX01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX01_ECTSI) HSP 1 Score: 180 bits (457), Expect = 4.230e-52 Identity = 88/101 (87.13%), Postives = 95/101 (94.06%), Query Frame = 1
Query: 19 QIGDRQVNVRSYTAAFNLRGSAQEKRVGDMSGGERNRVHLAKVLKEGHNVLLLDEPTNDLDVDTLRSLEDAIQDFVGCVLIVSHDRWFLDRVCSHTIAFEE 321
QIGDRQVNVR+YTAAFNLRG++Q+K VG MSGGERNRVHLAKVLK+GHNVLLLDEPTNDLDVDTLRSLE+AI F G VLIVSHDRWFLDRVCSHTIAFE+
Sbjct: 411 QIGDRQVNVRAYTAAFNLRGASQDKLVGTMSGGERNRVHLAKVLKQGHNVLLLDEPTNDLDVDTLRSLEEAINGFAGSVLIVSHDRWFLDRVCSHTIAFED 511
BLAST of mRNA_H-paniculata_contig18139.4400.1 vs. uniprot
Match: A0A6H5JQX9_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQX9_9PHAE) HSP 1 Score: 179 bits (453), Expect = 1.510e-50 Identity = 87/101 (86.14%), Postives = 95/101 (94.06%), Query Frame = 1
Query: 19 QIGDRQVNVRSYTAAFNLRGSAQEKRVGDMSGGERNRVHLAKVLKEGHNVLLLDEPTNDLDVDTLRSLEDAIQDFVGCVLIVSHDRWFLDRVCSHTIAFEE 321
QIGDR+VNVR+YTAAFNLRG++Q+K VG MSGGERNRVHLAKVLK+GHNVLLLDEPTNDLDVDTLRSLE+AI F G VLIVSHDRWFLDRVCSHTIAFE+
Sbjct: 584 QIGDRKVNVRAYTAAFNLRGASQDKLVGTMSGGERNRVHLAKVLKQGHNVLLLDEPTNDLDVDTLRSLEEAINGFAGSVLIVSHDRWFLDRVCSHTIAFED 684
BLAST of mRNA_H-paniculata_contig18139.4400.1 vs. uniprot
Match: A0A7S2DH67_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DH67_9EUKA) HSP 1 Score: 158 bits (400), Expect = 6.480e-47 Identity = 73/101 (72.28%), Postives = 88/101 (87.13%), Query Frame = 1
Query: 22 IGDRQVNVRSYTAAFNLRGSAQEKRVGDMSGGERNRVHLAKVLKEGHNVLLLDEPTNDLDVDTLRSLEDAIQDFVGCVLIVSHDRWFLDRVCSHTIAFEEE 324
+G R+VNVR+Y AAFNLRGS QEK VG +SGGER RVHLAK L+EG N+LLLDEP+NDLDVDTLRSLE+A+ DF G +++SHDRWFLDRVC+HT+AFE +
Sbjct: 91 LGGREVNVRAYVAAFNLRGSMQEKSVGSLSGGERGRVHLAKTLREGCNLLLLDEPSNDLDVDTLRSLEEALTDFAGSAVVISHDRWFLDRVCTHTLAFEHD 191
BLAST of mRNA_H-paniculata_contig18139.4400.1 vs. uniprot
Match: A0A2N2K314_9DELT (Energy-dependent translational throttle protein EttA (Fragment) n=1 Tax=Deltaproteobacteria bacterium HGW-Deltaproteobacteria-10 TaxID=2013737 RepID=A0A2N2K314_9DELT) HSP 1 Score: 155 bits (393), Expect = 1.470e-46 Identity = 69/101 (68.32%), Postives = 89/101 (88.12%), Query Frame = 1
Query: 22 IGDRQVNVRSYTAAFNLRGSAQEKRVGDMSGGERNRVHLAKVLKEGHNVLLLDEPTNDLDVDTLRSLEDAIQDFVGCVLIVSHDRWFLDRVCSHTIAFEEE 324
IG RQ+N R+Y + FN G+ Q+K+VG +SGGERNRVHLA++LKEG NVLLLDEPTNDLDV+TLR+LEDA+++F GCV+++SHDRWFLDR+C+H +AFE E
Sbjct: 21 IGSRQINSRAYVSRFNFSGTDQQKKVGTLSGGERNRVHLARMLKEGANVLLLDEPTNDLDVNTLRALEDALENFAGCVVVISHDRWFLDRICTHILAFEGE 121
BLAST of mRNA_H-paniculata_contig18139.4400.1 vs. uniprot
Match: A0A6J6YDC8_9ZZZZ (Unannotated protein n=1 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J6YDC8_9ZZZZ) HSP 1 Score: 153 bits (387), Expect = 9.390e-46 Identity = 67/100 (67.00%), Postives = 89/100 (89.00%), Query Frame = 1
Query: 19 QIGDRQVNVRSYTAAFNLRGSAQEKRVGDMSGGERNRVHLAKVLKEGHNVLLLDEPTNDLDVDTLRSLEDAIQDFVGCVLIVSHDRWFLDRVCSHTIAFE 318
++G+R++N R+Y A+FN +GS Q+K+VGD+SGGERNRVHLAK+LK G NVLLLDEPTNDLDVDTLR+LED+++ F GC +++SHDRWFLDR+ +H +AFE
Sbjct: 13 KVGNREINGRAYVASFNFKGSDQQKKVGDLSGGERNRVHLAKLLKTGGNVLLLDEPTNDLDVDTLRALEDSLEAFPGCAVVISHDRWFLDRIATHVLAFE 112
BLAST of mRNA_H-paniculata_contig18139.4400.1 vs. uniprot
Match: A0A537T6F4_9PROT (ATP-binding cassette domain-containing protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537T6F4_9PROT) HSP 1 Score: 152 bits (385), Expect = 1.390e-45 Identity = 68/102 (66.67%), Postives = 88/102 (86.27%), Query Frame = 1
Query: 13 LAQIGDRQVNVRSYTAAFNLRGSAQEKRVGDMSGGERNRVHLAKVLKEGHNVLLLDEPTNDLDVDTLRSLEDAIQDFVGCVLIVSHDRWFLDRVCSHTIAFE 318
+ Q+G R+VN R+Y + FN +G+ Q+K+VG +SGGERNRVHLAK+LK G NVLLLDEPTNDLDVDTLR+LE+A++DF GC +I+SHDRWFLDR+ +H +AFE
Sbjct: 1 IIQLGKREVNSRAYCSNFNFKGADQQKKVGSLSGGERNRVHLAKMLKSGANVLLLDEPTNDLDVDTLRALEEALEDFAGCAVIISHDRWFLDRIATHILAFE 102
BLAST of mRNA_H-paniculata_contig18139.4400.1 vs. uniprot
Match: T0ZX24_9ZZZZ (ABC transporter, ATP-binding protein n=1 Tax=mine drainage metagenome TaxID=410659 RepID=T0ZX24_9ZZZZ) HSP 1 Score: 152 bits (385), Expect = 1.780e-45 Identity = 69/99 (69.70%), Postives = 86/99 (86.87%), Query Frame = 1
Query: 22 IGDRQVNVRSYTAAFNLRGSAQEKRVGDMSGGERNRVHLAKVLKEGHNVLLLDEPTNDLDVDTLRSLEDAIQDFVGCVLIVSHDRWFLDRVCSHTIAFE 318
IG+R+V+ R+Y A+F +GS Q+KRVGD+SGGERNRVHLA VL+ G NVLLLDEPTNDLDVDTLR+LEDA++ F GC +++SHDRWFLDRV +H +AFE
Sbjct: 11 IGNREVHARAYVASFGFKGSDQQKRVGDLSGGERNRVHLASVLRRGGNVLLLDEPTNDLDVDTLRALEDALESFPGCAVVISHDRWFLDRVATHVLAFE 109
BLAST of mRNA_H-paniculata_contig18139.4400.1 vs. uniprot
Match: A0A7S4BTX0_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BTX0_CHRCT) HSP 1 Score: 156 bits (395), Expect = 1.170e-44 Identity = 69/100 (69.00%), Postives = 87/100 (87.00%), Query Frame = 1
Query: 25 GDRQVNVRSYTAAFNLRGSAQEKRVGDMSGGERNRVHLAKVLKEGHNVLLLDEPTNDLDVDTLRSLEDAIQDFVGCVLIVSHDRWFLDRVCSHTIAFEEE 324
G+++VN+R+Y AAFNLRG+ QEK VG +SGGER RVHLAK L+ GHN+L+LDEP+NDLDVDTLRSLEDA++DF G +++SHDRWFLDRVC HT+ FE +
Sbjct: 217 GEKEVNMRAYVAAFNLRGTTQEKLVGKLSGGERGRVHLAKTLRGGHNLLMLDEPSNDLDVDTLRSLEDALRDFAGSAIVISHDRWFLDRVCDHTLGFESD 316
BLAST of mRNA_H-paniculata_contig18139.4400.1 vs. uniprot
Match: A0A535H6C1_9CHLR (ATP-binding cassette domain-containing protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535H6C1_9CHLR) HSP 1 Score: 152 bits (385), Expect = 1.210e-44 Identity = 71/100 (71.00%), Postives = 86/100 (86.00%), Query Frame = 1
Query: 19 QIGDRQVNVRSYTAAFNLRGSAQEKRVGDMSGGERNRVHLAKVLKEGHNVLLLDEPTNDLDVDTLRSLEDAIQDFVGCVLIVSHDRWFLDRVCSHTIAFE 318
QIG R NVR+Y A+ N RG+ Q+K+VGD+SGGERNRVHLAK+L+ G NVLLLDEPTNDLDVDTLR+LE+AI DF GCV+++SHDRWFLDRV +H + FE
Sbjct: 75 QIGARTRNVRAYAASLNFRGADQQKKVGDLSGGERNRVHLAKLLRSGGNVLLLDEPTNDLDVDTLRALEEAILDFAGCVVVISHDRWFLDRVATHMLIFE 174
BLAST of mRNA_H-paniculata_contig18139.4400.1 vs. uniprot
Match: A0A3C1GLT0_9BACT (Energy-dependent translational throttle protein EttA (Fragment) n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A3C1GLT0_9BACT) HSP 1 Score: 151 bits (381), Expect = 1.290e-44 Identity = 68/101 (67.33%), Postives = 86/101 (85.15%), Query Frame = 1
Query: 22 IGDRQVNVRSYTAAFNLRGSAQEKRVGDMSGGERNRVHLAKVLKEGHNVLLLDEPTNDLDVDTLRSLEDAIQDFVGCVLIVSHDRWFLDRVCSHTIAFEEE 324
+G RQ+ R+Y A+FN +GS Q+KRVGD+SGGERNRVHLAK+L+ NV LLDEPTNDLDVDTLR+LEDA+ F GCVL++SHDRWFLDR+ +H +AFE++
Sbjct: 30 LGTRQIASRAYVASFNFKGSDQQKRVGDLSGGERNRVHLAKMLQSAGNVFLLDEPTNDLDVDTLRALEDALLGFAGCVLVISHDRWFLDRIATHMLAFEDD 130 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18139.4400.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig18139.4400.1 >prot_H-paniculata_contig18139.4400.1 ID=prot_H-paniculata_contig18139.4400.1|Name=mRNA_H-paniculata_contig18139.4400.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=108bp MCRKLAQIGDRQVNVRSYTAAFNLRGSAQEKRVGDMSGGERNRVHLAKVLback to top mRNA from alignment at H-paniculata_contig18139:421..1103- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig18139.4400.1 ID=mRNA_H-paniculata_contig18139.4400.1|Name=mRNA_H-paniculata_contig18139.4400.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=683bp|location=Sequence derived from alignment at H-paniculata_contig18139:421..1103- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig18139:421..1103- >mRNA_H-paniculata_contig18139.4400.1 ID=mRNA_H-paniculata_contig18139.4400.1|Name=mRNA_H-paniculata_contig18139.4400.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=648bp|location=Sequence derived from alignment at H-paniculata_contig18139:421..1103- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |