mRNA_H-paniculata_contig18138.4399.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig18138.4399.1
Unique NamemRNA_H-paniculata_contig18138.4399.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig18138.4399.1 vs. uniprot
Match: D7FJL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJL4_ECTSI)

HSP 1 Score: 204 bits (518), Expect = 6.520e-58
Identity = 91/132 (68.94%), Postives = 111/132 (84.09%), Query Frame = 3 
Query:  207 RIIWLSPLMFGFAHLHHAYEWLRQGHAARTVAIGVIFQMIYTSLFGAYAVFVQMRTGHLASSILVHALCNFMGVPDLTFNVAPGNSQESTPTSVLYQRRIGIWCFYCTGVCLFCVLLFPLTSPGLYGSILWS 602
            +I+WLSPL+FGFAHLHH  EWLRQG++ R VA+G++FQ+ YTS+FGA+A FVQ+RTGHL SSILVH LCNFMGVPD+TF++APGN  EST TSVLY+ R  +WC Y  G+ LF  L+ PLTSPGLYGS+LWS
Sbjct:    2 KIVWLSPLLFGFAHLHHVLEWLRQGNSVRAVAVGMLFQIAYTSVFGAFAAFVQLRTGHLVSSILVHMLCNFMGVPDITFSIAPGNPGESTRTSVLYKHRKRLWCCYVVGIFLFGGLIRPLTSPGLYGSVLWS 133
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BLAST of mRNA_H-paniculata_contig18138.4399.1 vs. uniprot
Match: W2ICP7_PHYPR (Uncharacterized protein n=12 Tax=Phytophthora parasitica TaxID=4792 RepID=W2ICP7_PHYPR)

HSP 1 Score: 158 bits (400), Expect = 7.910e-40
Identity = 83/181 (45.86%), Postives = 111/181 (61.33%), Query Frame = 3 
Query:   87 NISHGRYVTIRNLLVGPIAEEVVFRGCSIPLLLGAGVERTRIIWLSPLMFGFAHLHHAYEWLRQGHAARTVAIGVIFQMIYTSLFGAYAVFVQMRTGHLASSILVHALCNFMGVPDLTFNVAPGNSQESTPTSVLYQRRIGIWCFYCTGVCLFCVLLFPLTSPGLYGSILWS*AGSAMLHE 629
            +I+H R  ++R  ++GP+ EE VFR C +PLL+ A     +II  SPLMFG AHLHH  E++R G + +  A+ V FQ++YTSLFGAYA F+ +RTGH AS  LVH  CN MG PDL+F           P S L+  R+ +   Y  G+  F +LL PLT P +Y S +W+   SA  HE
Sbjct:   92 SITHDRLPSLRTYVLGPLTEEFVFRSCMVPLLVCAEFTVKQIILGSPLMFGAAHLHHFLEYVRHGRSPKDAALTVGFQLLYTSLFGAYATFIFLRTGHFASIFLVHVFCNVMGFPDLSF---------FNPESSLHPYRLVLLGAYFFGIYGFSLLLMPLTEPAIYSSGMWNMTASATEHE 263
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BLAST of mRNA_H-paniculata_contig18138.4399.1 vs. uniprot
Match: A0A835Z1X7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1X7_9STRA)

HSP 1 Score: 159 bits (402), Expect = 2.570e-39
Identity = 90/212 (42.45%), Postives = 113/212 (53.30%), Query Frame = 3 
Query:    3 VTSVGHTRPRAHVLPWHVAIWRELAKKANISHGRYVTIRNLLVGPIAEEVVFRGCSIPLLLGAGVERTRIIWLSPLMFGFAHLHHAYEWLRQGHAARTVAIGVIFQMIYTSLFGAYAVFVQMRTGHLASSILVHALCNFMGVPDLTFNVAPGNSQESTPTSVLY---------QRRIG---IWCFYCTGVCLFCVLLFPLTSPGLYGSILWS 602
            V   G+ RP         A   +L  ++  +   Y T+RNLLVGP+ EEVVFRGC +P+LL AG  R  I   SPL+FG AH HH  E LR G      A+ V+ Q+ YTS+FGA    + +RTGHL ++   H LCNFMG+PDL+FNV PG+    T   +L           RR     IW  Y  GV LF  L +PLT      S LW 
Sbjct:  126 VDVFGNARPAERRRSLLRAAAADLLTRSGATVQPYATLRNLLVGPVTEEVVFRGCFLPILLSAGASRGAITCASPLLFGLAHAHHIREGLRNGRGFLAAAVPVLVQLSYTSVFGALVALIHLRTGHLCATAACHILCNFMGLPDLSFNVPPGDYARPTYHLLLAINDSDGRCNGRRSNAQVIWASYGVGVILFFRLFYPLTETSAAASHLWQ 337
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BLAST of mRNA_H-paniculata_contig18138.4399.1 vs. uniprot
Match: A0A2D4BGL3_PYTIN (Prenyl protein protease n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BGL3_PYTIN)

HSP 1 Score: 157 bits (398), Expect = 3.910e-39
Identity = 81/172 (47.09%), Postives = 106/172 (61.63%), Query Frame = 3 
Query:   87 NISHGRYVTIRNLLVGPIAEEVVFRGCSIPLLLGAGVERTRIIWLSPLMFGFAHLHHAYEWLRQGHAARTVAIGVIFQMIYTSLFGAYAVFVQMRTGHLASSILVHALCNFMGVPDLTFNVAPGNSQESTPTSVLYQRRIGIWCFYCTGVCLFCVLLFPLTSPGLYGSILWS 602
            +I+H +  ++RN ++GP+ EE VFR C +PLL+ A     +II  SPL FG AHLHH  E L+ G + +  ++ V FQ+IYTSLFGAYA F+ +RTGH  S  L+H  CN MG+PDL+F           P S L+  RI I   Y  G+ LF  LL PLT P LY S LW+
Sbjct:  135 SITHDKLPSLRNFILGPLTEEFVFRSCMVPLLICAEFSAKQIIIGSPLTFGVAHLHHFIEHLKSGRSIKDASLIVGFQLIYTSLFGAYATFIYLRTGHFVSIFLIHVFCNVMGLPDLSF---------FNPESSLHSFRIVILASYAIGIYLFSQLLVPLTEPALYESELWN 297
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BLAST of mRNA_H-paniculata_contig18138.4399.1 vs. uniprot
Match: A0A3R7JWH5_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A3R7JWH5_9STRA)

HSP 1 Score: 156 bits (395), Expect = 1.150e-38
Identity = 84/181 (46.41%), Postives = 109/181 (60.22%), Query Frame = 3 
Query:   87 NISHGRYVTIRNLLVGPIAEEVVFRGCSIPLLLGAGVERTRIIWLSPLMFGFAHLHHAYEWLRQGHAARTVAIGVIFQMIYTSLFGAYAVFVQMRTGHLASSILVHALCNFMGVPDLTFNVAPGNSQESTPTSVLYQRRIGIWCFYCTGVCLFCVLLFPLTSPGLYGSILWS*AGSAMLHE 629
            +I+H R  ++R  ++GP+ EE VFR C +PLL+ A     +I+  SPLMFG AHLHH  E++R G + +  A+ V FQ+IYTSLFGAYA FV +RTGH  S  LVH  CN MG PDLTF           P + L+  RI +   Y  G+  F  LL PLT P +Y S +W+   SA  HE
Sbjct:  135 SITHDRLPSLRTYVLGPLTEEFVFRSCMVPLLVCAEFTVKQIVLGSPLMFGAAHLHHFMEYVRHGRSPKDAALTVGFQLIYTSLFGAYATFVFLRTGHFVSIFLVHMFCNVMGFPDLTF---------FNPENGLHPYRIVLLGAYLIGIYGFSRLLMPLTEPAIYSSEMWNVTVSAKEHE 306
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BLAST of mRNA_H-paniculata_contig18138.4399.1 vs. uniprot
Match: A0A8K1FR09_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FR09_PYTOL)

HSP 1 Score: 155 bits (392), Expect = 4.750e-38
Identity = 83/187 (44.39%), Postives = 109/187 (58.29%), Query Frame = 3 
Query:   51 HVAIWRELAKKA---NISHGRYVTIRNLLVGPIAEEVVFRGCSIPLLLGAGVERTRIIWLSPLMFGFAHLHHAYEWLRQGHAARTVAIGVIFQMIYTSLFGAYAVFVQMRTGHLASSILVHALCNFMGVPDLTFNVAPGNSQESTPTSVLYQRRIGIWCFYCTGVCLFCVLLFPLTSPGLYGSILWS 602
            H  +W  L   A   +I+H +  ++RN ++GP+ EE VFR C +PLL+ A     +II  SPL FG AHLHH  E L+ G + +   + V FQ++YTSLFGAYA FV +RTGH  S  L+H  CN MG PDL+F          +P S L+  R  I   Y  G+  F VLL PLT P +Y S LW+
Sbjct:  146 HGGMWLALKNSALYYSITHDKLPSLRNYILGPLTEEFVFRSCMVPLLICADFSAKQIILGSPLTFGVAHLHHFVEHLKSGRSIKEALLIVGFQLMYTSLFGAYATFVYLRTGHFISIFLIHIFCNVMGFPDLSF---------FSPESTLHPFRAVILGTYFAGIYFFSVLLMPLTEPSIYESELWN 323
[Close]
BLAST of mRNA_H-paniculata_contig18138.4399.1 vs. uniprot
Match: F0XW48_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XW48_AURAN)

HSP 1 Score: 146 bits (368), Expect = 9.100e-37
Identity = 75/170 (44.12%), Postives = 103/170 (60.59%), Query Frame = 3 
Query:  108 VTIRNLLVGPIAEEVVFRGCSIPLLLGAGVERTRIIWLSPLMFGFAHLHHAYEWLRQGHAARTVAIG-VIFQMIYTSLFGAYAVFVQMRTGHLASSILVHALCNFMGVPDLTFNVAPGN-----SQESTPTSVLYQRRIGIWCFYCTGVCLFCVLLFPLTSPGLYGSILW 599
            +++RNL+VGP++EE VFR C +PLLL AG+   R +  SPL FG AHLHH    +R   A    A+G  +FQ  YT+LFG Y  FV  RTG+LA++   H  CN+MG+PDL F+  P +      +E     VL++ R  ++  +  G+ LF  LLFPLT P  +GS  W
Sbjct:    1 MSLRNLVVGPLSEEFVFRACMVPLLLDAGLGTARAVCCSPLFFGVAHLHHLRRRVRDDRAPVLEALGQTLFQFAYTTLFGVYTAFVFARTGNLAAAFACHGFCNYMGLPDLDFSCVPSDLPWLSKREKLVQVVLHKHRTLLFALHGAGMALFGALLFPLTRPEAFGSPYW 170
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BLAST of mRNA_H-paniculata_contig18138.4399.1 vs. uniprot
Match: A0A0P1B321_PLAHL (Caax prenyl protease 2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B321_PLAHL)

HSP 1 Score: 149 bits (376), Expect = 4.140e-36
Identity = 83/182 (45.60%), Postives = 111/182 (60.99%), Query Frame = 3 
Query:   87 NISHGRYVTIRNLLVGPIAEEVVFRGCSIPLLLGAGVERTRIIWLSPLMFGFAHLHHAYEWLRQGHAARTVAIGVI-FQMIYTSLFGAYAVFVQMRTGHLASSILVHALCNFMGVPDLTFNVAPGNSQESTPTSVLYQRRIGIWCFYCTGVCLFCVLLFPLTSPGLYGSILWS*AGSAMLHE 629
            +I+H R  ++R  ++GP+ EE VFR C IPLL+ A     +I+  SPL+FG AHLHH  E++R G + +  A+ V  FQ++YTSLFGAYA F+ +RTGH AS  LVH  CN MG PDL F  +PGN         L+  RI +   Y  G+  F ++L PLT P +Y S LW+   SA   E
Sbjct:  135 SITHDRLPSLRTYVLGPLTEEFVFRSCMIPLLVCAKFTIKQIVVGSPLIFGAAHLHHFMEYVRHGRSLKDAALIVAGFQLVYTSLFGAYATFIFLRTGHFASIYLVHVFCNVMGFPDLAF-FSPGNP--------LHPFRIVLLGAYFLGIYGFSLILMPLTEPMIYSSELWNITASATEQE 307
[Close]
BLAST of mRNA_H-paniculata_contig18138.4399.1 vs. uniprot
Match: K3WRZ9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRZ9_GLOUD)

HSP 1 Score: 146 bits (368), Expect = 4.390e-35
Identity = 74/172 (43.02%), Postives = 103/172 (59.88%), Query Frame = 3 
Query:   87 NISHGRYVTIRNLLVGPIAEEVVFRGCSIPLLLGAGVERTRIIWLSPLMFGFAHLHHAYEWLRQGHAARTVAIGVIFQMIYTSLFGAYAVFVQMRTGHLASSILVHALCNFMGVPDLTFNVAPGNSQESTPTSVLYQRRIGIWCFYCTGVCLFCVLLFPLTSPGLYGSILWS 602
            +++  +  ++RN ++GP+ EE VFR C IPLL+ A     +I+W SPL FG AHLHH  E LR G + +  A+  +FQ++YTSLFGAYA F+ +RTGH  S  +VH  CN MG PD++F           P + L+  RI I   Y  G+  F  +L P T P +Y S LW+
Sbjct:  135 SVTRDQLPSLRNYILGPLTEEFVFRSCMIPLLVCADFSVKQIVWGSPLTFGVAHLHHFVEHLRNGRSPKDAALIALFQLLYTSLFGAYASFMYLRTGHFVSIFVVHVFCNIMGFPDISF---------FNPENSLHPFRIMILGAYFVGIYGFTRVLGPWTDPAIYSSELWN 297
[Close]
BLAST of mRNA_H-paniculata_contig18138.4399.1 vs. uniprot
Match: A0A024FZZ9_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZZ9_9STRA)

HSP 1 Score: 139 bits (349), Expect = 2.920e-32
Identity = 76/171 (44.44%), Postives = 97/171 (56.73%), Query Frame = 3 
Query:   90 ISHGRYVTIRNLLVGPIAEEVVFRGCSIPLLLGAGVERTRIIWLSPLMFGFAHLHHAYEWLRQGHAARTVAIGVIFQMIYTSLFGAYAVFVQMRTGHLASSILVHALCNFMGVPDLTFNVAPGNSQESTPTSVLYQRRIGIWCFYCTGVCLFCVLLFPLTSPGLYGSILWS 602
            ++  R   +RN +VGPI EE VFR C IPLL+ +     +II  SPL FG AHLHH  E LR G +    A+ V FQ++YT+LFGAYA F+ MRTGHL    LVH  CN MG PD+TF           P   L+  RI +   Y  G+  F  ++   T P +Y S LW+
Sbjct:  161 MTRERLPALRNYIVGPITEEFVFRSCMIPLLICSDFSHKQIILASPLTFGIAHLHHFIEHLRGGRSLWDAALIVGFQLLYTTLFGAYATFIYMRTGHLIGVFLVHMFCNIMGFPDVTF---------FNPDHSLHSFRIILLGAYLLGIYGFSRIVISWTEPDIYVSRLWN 322
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18138.4399.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJL4_ECTSI6.520e-5868.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W2ICP7_PHYPR7.910e-4045.86Uncharacterized protein n=12 Tax=Phytophthora para... [more]
A0A835Z1X7_9STRA2.570e-3942.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2D4BGL3_PYTIN3.910e-3947.09Prenyl protein protease n=1 Tax=Pythium insidiosum... [more]
A0A3R7JWH5_9STRA1.150e-3846.41Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]
A0A8K1FR09_PYTOL4.750e-3844.39Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0XW48_AURAN9.100e-3744.12Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A0P1B321_PLAHL4.140e-3645.60Caax prenyl protease 2 n=1 Tax=Plasmopara halstedi... [more]
K3WRZ9_GLOUD4.390e-3543.02Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A024FZZ9_9STRA2.920e-3244.44Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18138contigH-paniculata_contig18138:2..4748 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score187.6
Seed ortholog evalue3.6e-45
Seed eggNOG ortholog2880.D7FJL4
Preferred nameRCE1
KEGG rclassRC00141
KEGG koko:K08658
KEGG ReactionR09845
KEGG Pathwayko00900,ko01130,map00900,map01130
Hectar predicted targeting categorysignal anchor
GOsGO:0003674,GO:0003824,GO:0004175,GO:0004197,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006508,GO:0006807,GO:0007323,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0008237,GO:0009987,GO:0010467,GO:0012505,GO:0016020,GO:0016021,GO:0016485,GO:0016787,GO:0019538,GO:0030176,GO:0031136,GO:0031137,GO:0031139,GO:0031224,GO:0031227,GO:0031984,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043900,GO:0043902,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046999,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051604,GO:0065007,GO:0070011,GO:0071432,GO:0071586,GO:0071704,GO:0080120,GO:0098827,GO:0140096,GO:1901564,GO:2000241,GO:2000243
EggNOG free text desc.CAAX prenyl protease
EggNOG OGsKOG4130@1,KOG4130@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002
Exons5
Model size2553
Cds size375
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929411.2185097-UTR-H-paniculata_contig18138:1..19491622929411.2185097-UTR-H-paniculata_contig18138:1..1949Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig18138 2..1949 -
1691480849.6540132-UTR-H-paniculata_contig18138:1..19491691480849.6540132-UTR-H-paniculata_contig18138:1..1949Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig18138 2..1949 -
1622929411.2902691-UTR-H-paniculata_contig18138:4159..42611622929411.2902691-UTR-H-paniculata_contig18138:4159..4261Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig18138 4160..4261 -
1691480849.7135515-UTR-H-paniculata_contig18138:4159..42611691480849.7135515-UTR-H-paniculata_contig18138:4159..4261Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig18138 4160..4261 -
1622929411.3062-UTR-H-paniculata_contig18138:4620..47481622929411.3062-UTR-H-paniculata_contig18138:4620..4748Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig18138 4621..4748 -
1691480849.7229254-UTR-H-paniculata_contig18138:4620..47481691480849.7229254-UTR-H-paniculata_contig18138:4620..4748Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig18138 4621..4748 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929411.2323828-CDS-H-paniculata_contig18138:1949..20471622929411.2323828-CDS-H-paniculata_contig18138:1949..2047Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18138 1950..2047 -
1691480849.666421-CDS-H-paniculata_contig18138:1949..20471691480849.666421-CDS-H-paniculata_contig18138:1949..2047Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18138 1950..2047 -
1622929411.2441733-CDS-H-paniculata_contig18138:2584..27161622929411.2441733-CDS-H-paniculata_contig18138:2584..2716Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18138 2585..2716 -
1691480849.6753922-CDS-H-paniculata_contig18138:2584..27161691480849.6753922-CDS-H-paniculata_contig18138:2584..2716Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18138 2585..2716 -
1622929411.2585125-CDS-H-paniculata_contig18138:3242..33741622929411.2585125-CDS-H-paniculata_contig18138:3242..3374Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18138 3243..3374 -
1691480849.6847563-CDS-H-paniculata_contig18138:3242..33741691480849.6847563-CDS-H-paniculata_contig18138:3242..3374Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18138 3243..3374 -
1622929411.2764204-CDS-H-paniculata_contig18138:4146..41591622929411.2764204-CDS-H-paniculata_contig18138:4146..4159Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18138 4147..4159 -
1691480849.7023983-CDS-H-paniculata_contig18138:4146..41591691480849.7023983-CDS-H-paniculata_contig18138:4146..4159Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18138 4147..4159 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18138.4399.1prot_H-paniculata_contig18138.4399.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig18138 1950..4159 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig18138.4399.1

>prot_H-paniculata_contig18138.4399.1 ID=prot_H-paniculata_contig18138.4399.1|Name=mRNA_H-paniculata_contig18138.4399.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=125bp
MFGFAHLHHAYEWLRQGHAARTVAIGVIFQMIYTSLFGAYAVFVQMRTGH
LASSILVHALCNFMGVPDLTFNVAPGNSQESTPTSVLYQRRIGIWCFYCT
GVCLFCVLLFPLTSPGLYGSILWS*
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mRNA from alignment at H-paniculata_contig18138:2..4748-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig18138.4399.1 ID=mRNA_H-paniculata_contig18138.4399.1|Name=mRNA_H-paniculata_contig18138.4399.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4747bp|location=Sequence derived from alignment at H-paniculata_contig18138:2..4748- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGTTACGTCTGTTGGGCATACCCGACCCCGGGCACATGTACTGCCGTGG
CATGTTGCCATTTGGCGAGAGTTGGCGAAAAAGGCCAATATTTCTCACGG
AAGATACGTCACCATTCGGAATTTGCTGGTGGGTATTGCGTTGCAGTGGT
AGCGCTTTATTTTTGCAGTGCACATGTTTGGTGAGCACGACTGCGTTGAC
GTTACATCATATGACTTTACATAGGATGCCTTTTTTCTTGTCGCGCTGAC
TCAGAGTTCTTCTATTCCATGGCATGACTATCACAACACCTGCAATGTGT
GGTTTCAGGCCTTTAAGTATGAGCTGGGGTTGGATAAAGGTTTCGCTTAG
ATGGACGATCCACATATCATATCAGACGCCAGCTTCACATGAGAGCAGAG
GAAGGTTAGATGTGCCCATCGATGCCGACGACAGACACTGGGTTATCCGT
TACTAAACCAACGGAATATCTTGTCAATGTACTACAGGTGGGACCTATCG
CAGAGGAGGTGGTCTTTCGCGGATGTTCAATTCCGCTTCTCCTCGGCGCT
GGTGTAGAGCGCACAAGGATTATTTGGTTGAGTCCTTTGATGTTTGGCTT
TGGTGAGTTTGCGAAGCCCCACAGCCTGAACGACTTACTCTCTGCTCTCA
TCACTGCCGGCTGTAGGTTTGAAAAAGAGCGACGAGCTCAAATAATAATA
ATAACATGCACTCTTTGGTGAATCCCAGCTGATATGAAAACTGATGGTTG
TTTAACTGAATCCCACAGAGATGTGAGACAGAGGAAGTGCAGTGCACAGA
CTCGTGCTATAATGGTGATGTTGCTGTCGCGGTCGTGTTGAGTGGTCATG
CTTCGCTTGCCGGCGAATACTTGGCGAGAGGTGCCGTGAACCTGATAATG
AGAGGTCTGATCGAGGACTCCTAGCTTCTGCTCCCCGTTGATCGGCCACT
TCTCGCCAATGGCGTTACTACTACCATTATATTTCCCCCGAAGGACGGTT
ATTCTACTAGCATTAATCCTGGTGATTGTCAGAATGGTCAAACCTGATTT
TTTCTGTCTTGTGGTCAGAATTCCCACTCTGCATGGGTTGGAGCGTGCTC
CGGCGGGACCCTTTATTTTTCACTGAATGGGCGGCGTAGCTGGACTCGAA
ATCGATAAGAGTCGATTGCTCAATTTGTATTGTGGACACCCCTGGGAACA
TTTCTCGGCAAGAAGTGTCTTCGTCTTTATCTTGGTCTTTCTAACTGCGT
TGCGAATCCCCGACTGCAGATAAGACTCTCTCTCTCTTAGTTCTGCCGCC
CTATTTTTACCAGACCACCACCTACAAACTGGCGCGACCCCCCAATATTC
TCTCAATAACCACCCGCTGTGCAGCACATCTTCACCACGCCTATGAGTGG
CTTCGACAAGGACATGCTGCGAGAACAGTGGCGATTGGTGTGATATTCCA
GATGATCTACACGTCGCTTTTTGGGGCGTACGCGGTTTTTGTGCAGATGC
GAACAGGTGAGATAGATGTGATTACTGCCTGAGTACTTGATAGCGACGTG
ATCGAACGAACCGCCCAAATCGTGGCGGCGAGGCACGTCAGCTCCCCGGT
TGACACCCTTCCGTCCAATGTACCGGGCTATATCAATTTTTGGCTCTCGA
GCTCCTTGCACGCTGCCAACCACTGGGTGATTGCACGTTTCCCGAATATG
AACCGAGTGTCAAGACGAGATGTGGTGTGCCTCGACGGATTGCCACGCCT
GCCCGGTGCGGTGGAAAATTTGGGATAACTGGGCGCTGTATCGAAGTTTG
TGTGGTTCTGAGTTTATGTTTTGTGGGGCAAGTCAGCCACGGTTCGGTTC
ACTCGCGAAGCTGTCGGGGTAAACGATATAGACGTGATGTTCATGTACCA
TTTTTTCATGCTGTATACGAGTACTCCGATACCCTGCATTTTTGCAATGT
CCCACAGGGCAATTTCTATGGGCAATTTTGTTACGCAGTGTATGAATTCT
CCAATACCCCGCTTTTTTGCGACGTCCCACAGGGCATCTGGCTTCCTCCA
TTTTGGTTCACGCATTATGCAACTTCATGGGTGTGCCTGACTTGACGTTT
AACGTTGCGCCCGGAAATAGTCAAGAGTCCACCCCTACATCTGTTCTGTA
CCAACGTCGAATAGGTGAGTGAGGGTGAACACACGTGACGCACGATACGT
TGACATACGCCCAGTGAAGTTACTACTTGTCGTATGTCGGTTGTTGGTAT
TGATGTTTCTCGACTTGAAGGTACAATACGATCGCAAAAGAAGAACGTAA
ATGAACATGCCTACACACACATATCTGTGCGCAGAGCATGGTGATATATT
GGTCGGTTCATGCTCAGTAAACCTTAGGATGGCGAAACTTGTTGCAGAGC
TCTTGTCTTCATATAGTGCACAATGCTTTTTTCCCGACGTTTTTGGTCAG
TGATCTCCCAAGGTTTCGAATGTGGACAATTGCTACACGCAAGGACACTG
GTGGGCGAGTTAACAACATCTCGCGTTTCGAACGCGCCCTATTCTTTGTT
GCCTGTTGTTTTCAGTTATTGTCCCTATTCGCCCAGTTAAACATGGCTCG
TACTTGAAACTGCCTGTCAAGTGTGTTCGCTATGTTGTCCTGGTACATAA
AGCTGTGCTTTAGCTGTCGCCCTTCTCGTCGTGTCTCTACTCGTTGTCCA
GGTATTTGGTGTTTCTACTGTACCGGAGTCTGTCTGTTTTGCGTGCTTCT
GTTTCCTCTTACTTCTCCTGGATTATATGGCTCAATTCTATGGTCCTAGG
CTGGGTCGGCCATGTTGCATGAATAACGAAGACGCAGACGCTGCTGAAGA
ATGTTCCTGCGCGAGCTCTTTCTCCTGCATGCCAACCCTGGGCGAACAGC
ACGGTAACGATTTGTTCTGTTGATATTTTTTGCAGCCGTAACGCAGGACC
CAGATAAACCATAAACCTACGAACAACGATGCCTTGTTGCCCTCACCCTC
ATTCTAACCCCACACCGTTGATAAACCGGAAACTACTTCGGGTATCTCCC
TGGACCTTTTCCGATGTTTTTATCGCTGTTACGAACATAGTCAAGTCCAC
TGGGCATATATAAGCAAGTTCGGTGGTGTAAGACATTTCTAATATACCCC
AAATGATGTTTCTTCCTGTAGCAATATTATGCGAGAAAAATACCATTTAG
GCGCGTAACTTCCGCTGCTTGAGGGTTTCATTTTTTTTCTTCTATTTTGT
GCTAGGCTGGAGTATGGCGAATAAACCGAAAACCGATGTTTCCGAAATAT
TTTTAATTAGACCTCTCAGAGTCGCACCCATCGCAGCACCACACAGATCC
TGCTCACGCGTAGTGCCCCATGCAGGTCTTCTAATTGTTCACTGAGCATG
CCAGCCGGCGAGAGTATTTTCCAGATTCCAAGACAAATAGTCAGACAGCT
TGAGAGAAAAGAGCAGCAGTAGCGGATTGACTCCGAGACAAGAAAGGGGG
AAAAATTCGAATATTCTTAGTGCCGCCTGGTGATGCTGTATAATCACATC
CGAGATACGTTGTGGGCATTTCGAATCCCAGCTGTATTTCGGCCTAGAGT
AGTACATGAAGCTGCCGTTAACTCAAGTACCACTAAGTGTATGGGCCGCC
ATTTTACATTGGTCCAATTTTTGGCAGATAGATGGAAAAATGTCCGATTG
GCCTCGTGACTGCTAGAAAACTTGTTGCAGATTTTGACTAAGAATGGGCA
AATAGGACTTTTTGCCCCCCTAAAACTGACTAAGAATGAGATATCACAGA
CAATCCTCGAAAAGAAGGTTCATCTTTTTGTGAGGTAAGCGATCTTTCGT
AATTTTACGATCAACAATTGCTGAATCATGCAAAACGGCCCAATACTTCG
TGAAAGGGTATGACGCTAAAACAAGGGTACCAAGAAGCGCTTATTCTTCT
TGTTTTTGCCCATATCTCAGTAACCAATGCCTCGATTGGAAAACGGACAA
CATTTCTTGAACGCTGACGCCATACATATCATTACACGAAGTCTTGGGGC
CGTTTTGCATGATTCGGCAATATTGATGGTTAAATCACGAAAAATCGTTT
CATCCTTACGAAAACGATTAACCTCATTTTTGAGGATTGTCCGATACATA
ATATTTCTGTTTAAAAAATGCCAACTATTTCAGGGTCTTCCTAGGCAATT
CACTGGTCTCAACGCGTTACTGAAATCATGATAACTTTGGATGTAGTAGA
CCTCAACCACAACAGATCGAAGTTTCCCGTGAAGCCCCAACGGCGAGCTG
GTGGCTCATAGTGGTCCGAACGAAAACAATACAACGGGGGGAGGTTGGGT
ATTCGAGTACAACGCGTGGTTACTATTAGGTATGCATTTTTATTTTTTCG
TCTGATGTTCATTTTTCTTACTTTGTGAGCCTACTGTTGAAGATTCCCAA
CAGCCAGCTCTGAGTCTGCAATTGTCAGAAGGCAATAATAACAATAATCC
AACGGGGGAACTATGAGGCCGACCTAAACATTAATCGTGCTTCTTCATAT
ATCGCACCACTATCCTTCCCGACATACATGATCTTCAGTGCTGACGGCAG
ATAGTCGCAAGGGCTGTTAGCCCATAAGCAGTTGTGTAGCCTCTGCATGA
GTGTAGCGCAAGATTATTATTATTATTATTATTTTTTTAACCCCCGGAAG
GCTGAGGCAAAAACCTTTACCGATGCTTCCATACTTGAGTATTTTAC
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Coding sequence (CDS) from alignment at H-paniculata_contig18138:2..4748-

>mRNA_H-paniculata_contig18138.4399.1 ID=mRNA_H-paniculata_contig18138.4399.1|Name=mRNA_H-paniculata_contig18138.4399.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=750bp|location=Sequence derived from alignment at H-paniculata_contig18138:2..4748- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTTGGCTTTGATGTTTGGCTTTGCACATCTTCACCACGCCTATGAGT
GGCTTCGACAAGGACATGCTGCGAGAACAGTGGCGATTGGTGTGATATTC
CAGATGATCTACACGTCGCTTTTTGGGGCGTACGCGGTTTTTGTGCAGAT
GCGAACAGCACATCTTCACCACGCCTATGAGTGGCTTCGACAAGGACATG
CTGCGAGAACAGTGGCGATTGGTGTGATATTCCAGATGATCTACACGTCG
CTTTTTGGGGCGTACGCGGTTTTTGTGCAGATGCGAACAGGGCATCTGGC
TTCCTCCATTTTGGTTCACGCATTATGCAACTTCATGGGTGTGCCTGACT
TGACGTTTAACGTTGCGCCCGGAAATAGTCAAGAGTCCACCCCTACATCT
GTTCTGTACCAACGTCGAATAGGGCATCTGGCTTCCTCCATTTTGGTTCA
CGCATTATGCAACTTCATGGGTGTGCCTGACTTGACGTTTAACGTTGCGC
CCGGAAATAGTCAAGAGTCCACCCCTACATCTGTTCTGTACCAACGTCGA
ATAGGTATTTGGTGTTTCTACTGTACCGGAGTCTGTCTGTTTTGCGTGCT
TCTGTTTCCTCTTACTTCTCCTGGATTATATGGCTCAATTCTATGGTCCT
AGGTATTTGGTGTTTCTACTGTACCGGAGTCTGTCTGTTTTGCGTGCTTC
TGTTTCCTCTTACTTCTCCTGGATTATATGGCTCAATTCTATGGTCCTAG
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