prot_H-paniculata_contig1813.4394.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1813.4394.1
Unique Nameprot_H-paniculata_contig1813.4394.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length125
Homology
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BLAST of mRNA_H-paniculata_contig1813.4394.1 vs. uniprot
Match: A0A6H5JXR3_9PHAE (AD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JXR3_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 8.390e-29
Identity = 51/75 (68.00%), Postives = 66/75 (88.00%), Query Frame = 0 
Query:    6 QLSVGQRVKIRPKVGAPQEGIVYTHDAITNTVTIKQDLHNTTTHSTIIVFNRSHIEMEVLPGAAVVDDSVALPNI 80
            +L VGQRVK+RPK G  QEG+VYTHDA+TNT+TIKQD+ NT THS I+V+NR+H++++V+PGA VVDD +ALPNI
Sbjct:    3 ELVVGQRVKVRPKAGPAQEGVVYTHDALTNTITIKQDIPNTKTHSAILVYNRAHVQIDVVPGAPVVDDCMALPNI 77
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1813.4394.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JXR3_9PHAE8.390e-2968.00AD domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1813contigH-paniculata_contig1813:3216..7030 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1813.4394.1mRNA_H-paniculata_contig1813.4394.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1813 2090..7194 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1813.4394.1 ID=prot_H-paniculata_contig1813.4394.1|Name=mRNA_H-paniculata_contig1813.4394.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=125bp
MSSEQQLSVGQRVKIRPKVGAPQEGIVYTHDAITNTVTIKQDLHNTTTHS
TIIVFNRSHIEMEVLPGAAVVDDSVALPNIRTATSIHMAPPRGAAVATAP
VDCTPIRGSGGSIGDPCFFVVVFS*
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