prot_H-paniculata_contig18119.4386.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18119.4386.1
Unique Nameprot_H-paniculata_contig18119.4386.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length205
Homology
BLAST of mRNA_H-paniculata_contig18119.4386.1 vs. uniprot
Match: A0A6H5JNZ7_9PHAE (Helicase C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ7_9PHAE)

HSP 1 Score: 192 bits (488), Expect = 2.220e-55
Identity = 108/158 (68.35%), Postives = 122/158 (77.22%), Query Frame = 0
Query:    1 MRTCRRKMIAEALGEQGGDDVCRG------TCDVCSGGAQAAVNT---DFTRHAETLVRILRHLASKEQRVTLKQLVEAWRVRKGAKAMPDHVMGDSRRPA-GLSRSTCERLVLRLLGLGVLSDDFHFTAFSVVHYIVTGARAHALESGSL-EVALEV 147
            M TCRR MIAEALGE+GG  +C G       CDVCSGG   A +    D T HA TLVRILRHLA KEQRVT +QLV+AWR +KGAKAMPD V+G++ RP   LSRS CERLVL+LLG GVLSDDFHFTAFSVVHY+VTGARAHALESG L +V+ +V
Sbjct:  177 MATCRRTMIAEALGERGGKGLCSGGXXXXXXCDVCSGGIDEAADVATLDATAHACTLVRILRHLALKEQRVTPRQLVDAWRAKKGAKAMPDEVVGENDRPPKALSRSACERLVLQLLGDGVLSDDFHFTAFSVVHYVVTGARAHALESGRLSQVSFQV 334          
BLAST of mRNA_H-paniculata_contig18119.4386.1 vs. uniprot
Match: D7FHZ5_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHZ5_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 1.120e-52
Identity = 106/159 (66.67%), Postives = 121/159 (76.10%), Query Frame = 0
Query:    1 MRTCRRKMIAEALGEQGGDDVCRG-------TCDVCSGGAQAAVNT---DFTRHAETLVRILRHLASKEQRVTLKQLVEAWRVRKGAKAMPDHVMGDSRRPA-GLSRSTCERLVLRLLGLGVLSDDFHFTAFSVVHYIVTGARAHALESGSL-EVALEV 147
            M TCRR MIAEALGE+GG  +C          CDVCSGG   A +    D T HA TLVRILRHLA KEQRVT +QLV+AWR +KGAKAMPD ++G++ RP   LSRS CERLVL+LLG GVLSDDFHFTAFSVVHY+VTGARAHALESG L +V+ +V
Sbjct:  351 MATCRRTMIAEALGERGGKGLCSSGXXXXXXXCDVCSGGIGEAADVATLDATAHACTLVRILRHLALKEQRVTPRQLVDAWRAKKGAKAMPDEIVGENDRPPKSLSRSACERLVLQLLGDGVLSDDFHFTAFSVVHYVVTGARAHALESGRLSQVSFQV 509          
BLAST of mRNA_H-paniculata_contig18119.4386.1 vs. uniprot
Match: C3ZXB5_BRAFL (ATP-dependent DNA helicase n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZXB5_BRAFL)

HSP 1 Score: 91.3 bits (225), Expect = 8.580e-18
Identity = 53/148 (35.81%), Postives = 82/148 (55.41%), Query Frame = 0
Query:    4 CRRKMIAEALGEQGGDDVCRGTCDVCSGGAQAAVNT-DFTRHAETLVRILRHLASKEQRVTLKQLVEAWRVRKGAKAMPDHVMGDSRRPAGLSRSTCERLVLRLLGLGVLSDDFHFTAFSVVHYIVTGARAHALESGSLEVALEVPTK 150
            CRR +IA+   E      C G CDVC        N  D T   + +VR+++   +KEQR+T  +L ++W + KG K   +H       PA L+R   ER++  +L  G L +D+HFT +S + Y+V G ++H L SG ++V L +P+K
Sbjct:  511 CRRAIIADHFDEGWDSTKCSGMCDVCDPTLVTVTNEEDVTSLCQEVVRVIQSATAKEQRLTGLKLADSW-LGKGDKRRGNH-------PAWLTREMGERVITHMLLEGYLREDYHFTPYSTISYLVPGPKSHRLTSGGVQVTLCIPSK 650          
BLAST of mRNA_H-paniculata_contig18119.4386.1 vs. uniprot
Match: C4A095_BRAFL (Uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C4A095_BRAFL)

HSP 1 Score: 89.7 bits (221), Expect = 2.080e-17
Identity = 52/148 (35.14%), Postives = 82/148 (55.41%), Query Frame = 0
Query:    4 CRRKMIAEALGEQGGDDVCRGTCDVCSGGAQAAVNT-DFTRHAETLVRILRHLASKEQRVTLKQLVEAWRVRKGAKAMPDHVMGDSRRPAGLSRSTCERLVLRLLGLGVLSDDFHFTAFSVVHYIVTGARAHALESGSLEVALEVPTK 150
            CRR +IA+   E      C G CDVC        +  D T   + +VR+++   +KEQR+T  +L ++W + KG K   +H       PA L+R   ER++  +L  G L +D+HFT +S + Y+V G ++H L SG ++V L +P+K
Sbjct:   47 CRRAIIADHFDEGWDSTKCSGMCDVCDPTLVTVTDEEDVTSLCQEVVRVIQSATAKEQRLTGLKLADSW-LGKGDKRRGNH----GNHPAWLTREMGERVITHMLLEGYLREDYHFTPYSTISYLVPGPKSHRLTSGGVQVTLCIPSK 189          
BLAST of mRNA_H-paniculata_contig18119.4386.1 vs. uniprot
Match: UPI0015FF2FAB (ATP-dependent DNA helicase Q1-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0015FF2FAB)

HSP 1 Score: 89.7 bits (221), Expect = 2.950e-17
Identity = 52/148 (35.14%), Postives = 82/148 (55.41%), Query Frame = 0
Query:    4 CRRKMIAEALGEQGGDDVCRGTCDVCSGGAQAAVNT-DFTRHAETLVRILRHLASKEQRVTLKQLVEAWRVRKGAKAMPDHVMGDSRRPAGLSRSTCERLVLRLLGLGVLSDDFHFTAFSVVHYIVTGARAHALESGSLEVALEVPTK 150
            CRR +IA+   E      C G CDVC        +  D T   + +VR+++   +KEQR+T  +L ++W + KG K   +H       PA L+R   ER++  +L  G L +D+HFT +S + Y+V G ++H L SG ++V L +P+K
Sbjct:  473 CRRAIIADHFDEGWDSTKCSGMCDVCDPTLVTVTDEEDVTSLCQEVVRVIQSATAKEQRLTGLKLADSW-LGKGDKRRGNH----GNHPAWLTREMGERVITHMLLEGYLREDYHFTPYSTISYLVPGPKSHRLTSGGVQVTLCIPSK 615          
BLAST of mRNA_H-paniculata_contig18119.4386.1 vs. uniprot
Match: UPI000D726A93 (ATP-dependent DNA helicase Q1-like n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D726A93)

HSP 1 Score: 89.0 bits (219), Expect = 5.310e-17
Identity = 58/148 (39.19%), Postives = 83/148 (56.08%), Query Frame = 0
Query:    4 CRRKMIAEALGEQGGDDVCRGTCDVCSGGAQAAV-NTDFTRHAETLVRILRHLASKEQRVTLKQLVEAWRVRKGAKAMPDHVMGDSRRPAGLSRSTCERLVLRLLGLGVLSDDFHFTAFSVVHYIVTGARAHALESGSLEVALEVPTK 150
            CRR  IA   GE    + C   CD C    Q  V   D TR+ + +VRIL + AS  QRVT  +L++AW   KG+ ++    + D + P G++R   ER++  +L  G L +DFHFTA+S + Y+V G +A AL  G+  V +E  TK
Sbjct:  454 CRRVRIARHFGELWDAEQCVAMCDHCDPKTQREVCRRDVTRYCKEVVRILENAASTNQRVTAVKLLDAW-YGKGSVSLR---VRDIKAP-GVTREKAERILAHMLLEGYLREDFHFTAYSTICYLVPGPKAKALTLGTAHVTMEFETK 596          
BLAST of mRNA_H-paniculata_contig18119.4386.1 vs. uniprot
Match: UPI0014589BDE (ATP-dependent DNA helicase Q1-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI0014589BDE)

HSP 1 Score: 87.4 bits (215), Expect = 1.800e-16
Identity = 54/149 (36.24%), Postives = 82/149 (55.03%), Query Frame = 0
Query:    4 CRRKMIAEALGEQGGDDVCRGTCDVCSGGAQAAVNT-DFTRHAETLVRILRHLASKEQRVTLKQLVEAWRVRKGAKAMPDHVMGDSRRPAGLSRSTCERLVLRLLGLGVLSDDFHFTAFSVVHYIVTGARAHALESGSLEVALEVPTKE 151
            CRR MIA   GE      C   CD C    +      D T+  + ++ +L H A  +QRVT  +L++AW  R GA ++    + D   P  +SR   ER++  LL  G + +DFHFTA+S + YIV G+++  L+SGS ++ +E P K+
Sbjct:  441 CRRSMIARHFGEVWERSQCNKMCDHCDDTYRVTPEKRDVTKLCQNVLTLLDHAAQTQQRVTATKLMDAWEGR-GATSLR---VRDVPEP-NISRDKLERILAHLLLNGYIKEDFHFTAYSTISYIVAGSKSRLLQSGSSKIGMEFPGKK 584          
BLAST of mRNA_H-paniculata_contig18119.4386.1 vs. uniprot
Match: A0A3M6TQQ1_POCDA (ATP-dependent DNA helicase n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TQQ1_POCDA)

HSP 1 Score: 86.3 bits (212), Expect = 4.280e-16
Identity = 48/154 (31.17%), Postives = 79/154 (51.30%), Query Frame = 0
Query:    2 RTCRRKMIAEALGEQGGDDVCRGTCDVC------SGGAQAAVNTDFTRHAETLVRILRHLASKEQRVTLKQLVEAWRVRKGAKAMPDHVMGDSRRPAGLSRSTCERLVLRLLGLGVLSDDFHFTAFSVVHYIVTGARAHALESGSLEVALEVPT 149
            + CRR +I    GE      C   CD C      + G+ +    D T H + +++IL+   S  +RVT  +LV+AW  +  A      +         LSR  CER+++ LL  GVL +DFHFT +S + Y++ G++A  ++SG+  + + + T
Sbjct:  430 KVCRRSLIGRHFGESWNPVDCHEMCDNCKKTGDQTDGSSSIEARDITNHCQDILKILQQAVSLSERVTPVKLVDAWNGKGQASLRVREIKAPD-----LSREDCERVIIHLLLEGVLREDFHFTPYSTISYVLPGSKARVVQSGTKRIFMNLRT 578          
BLAST of mRNA_H-paniculata_contig18119.4386.1 vs. uniprot
Match: A0A2B4SSZ7_STYPI (ATP-dependent DNA helicase n=3 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4SSZ7_STYPI)

HSP 1 Score: 85.5 bits (210), Expect = 7.750e-16
Identity = 49/154 (31.82%), Postives = 79/154 (51.30%), Query Frame = 0
Query:    2 RTCRRKMIAEALGEQGGDDVCRGTCDVC------SGGAQAAVNTDFTRHAETLVRILRHLASKEQRVTLKQLVEAWRVRKGAKAMPDHVMGDSRRPAGLSRSTCERLVLRLLGLGVLSDDFHFTAFSVVHYIVTGARAHALESGSLEVALEVPT 149
            + CRR +I    GE      C   CD C      + G+ +    D T H + +++IL+   S  +RVT  +LV+AW  +  A      V         LSR  CER+++ LL  GVL +DFHFT +S + Y++ G++A  ++SG+  + + + T
Sbjct:  349 KVCRRSLIGRHFGESWNPVDCHEMCDNCKKTGDQTDGSYSFEARDITNHCQDILKILQQAVSLSERVTPVKLVDAWNGKGQASLRVREVKSPD-----LSREDCERVIVHLLLEGVLREDFHFTPYSTISYVLPGSKARVVQSGAKRIFMNLRT 497          
BLAST of mRNA_H-paniculata_contig18119.4386.1 vs. uniprot
Match: A0A8J9VYA4_BRALA (RECQL protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9VYA4_BRALA)

HSP 1 Score: 85.1 bits (209), Expect = 1.130e-15
Identity = 52/150 (34.67%), Postives = 80/150 (53.33%), Query Frame = 0
Query:    4 CRRKMIAEALGEQGGDDVCRGTCDVCSGGAQAAVNT---DFTRHAETLVRILRHLASKEQRVTLKQLVEAWRVRKGAKAMPDHVMGDSRRPAGLSRSTCERLVLRLLGLGVLSDDFHFTAFSVVHYIVTGARAHALESGSLEVALEVPTK 150
            CRR +IA+   E      C G CDVC       + T   D T   + ++ +++   +KEQR+T  +L ++W + KG K   +H       P  LSR   ER++  +L  G L +D+HFT +S + Y+V G ++H L SG L+V L +P K
Sbjct:  447 CRRAIIADHFDEGWDSTKCSGMCDVCD--PTLVITTEEADITNLCKEVITVIQTATAKEQRLTGLKLGDSW-LGKGDKRRTNH-------PMWLSREMGERVITHMLLEGYLREDYHFTPYSTISYLVPGPKSHRLMSGGLQVTLCIPNK 586          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18119.4386.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNZ7_9PHAE2.220e-5568.35Helicase C-terminal domain-containing protein n=1 ... [more]
D7FHZ5_ECTSI1.120e-5266.67ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
C3ZXB5_BRAFL8.580e-1835.81ATP-dependent DNA helicase n=1 Tax=Branchiostoma f... [more]
C4A095_BRAFL2.080e-1735.14Uncharacterized protein (Fragment) n=1 Tax=Branchi... [more]
UPI0015FF2FAB2.950e-1735.14ATP-dependent DNA helicase Q1-like n=1 Tax=Branchi... [more]
UPI000D726A935.310e-1739.19ATP-dependent DNA helicase Q1-like n=1 Tax=Pomacea... [more]
UPI0014589BDE1.800e-1636.24ATP-dependent DNA helicase Q1-like n=1 Tax=Pecten ... [more]
A0A3M6TQQ1_POCDA4.280e-1631.17ATP-dependent DNA helicase n=2 Tax=Pocillopora dam... [more]
A0A2B4SSZ7_STYPI7.750e-1631.82ATP-dependent DNA helicase n=3 Tax=Pocilloporidae ... [more]
A0A8J9VYA4_BRALA1.130e-1534.67RECQL protein n=1 Tax=Branchiostoma lanceolatum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 35..149
e-value: 9.7E-24
score: 85.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18119contigH-paniculata_contig18119:3651..4658 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18119.4386.1mRNA_H-paniculata_contig18119.4386.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18119 3651..4664 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18119.4386.1 ID=prot_H-paniculata_contig18119.4386.1|Name=mRNA_H-paniculata_contig18119.4386.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=205bp
MRTCRRKMIAEALGEQGGDDVCRGTCDVCSGGAQAAVNTDFTRHAETLVR
ILRHLASKEQRVTLKQLVEAWRVRKGAKAMPDHVMGDSRRPAGLSRSTCE
RLVLRLLGLGVLSDDFHFTAFSVVHYIVTGARAHALESGSLEVALEVPTK
EAGGAGARAGGAGAAGSARGAGRAGKNDTGRGGGKIKGDPSDRGSGGGAD
GRARG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf