prot_H-paniculata_contig18098.4375.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18098.4375.1
Unique Nameprot_H-paniculata_contig18098.4375.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length218
Homology
BLAST of mRNA_H-paniculata_contig18098.4375.1 vs. uniprot
Match: D8LJR2_ECTSI (Coatomer protein complex, gamma sub-unit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJR2_ECTSI)

HSP 1 Score: 381 bits (979), Expect = 1.090e-129
Identity = 191/209 (91.39%), Postives = 195/209 (93.30%), Query Frame = 0
Query:    9 GNPELRLALNEDLVVGKANGTPSFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFALLNYRINAEFRCPFRLFPSIGDIDPYRMEVVVIVRGDMPETAAGTNVVVRVPXXXXXVSVNTEVESRVPGQTAEYSATEHRVVWTIKKFQGSSELTLRAKVTLPTVVNTAARKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFR 217
            GNPELRLALNEDLVVGKAN   SFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEF LLNYR+NAEFRCPFRLFPSIGDIDPYRMEVVVIVR DMPETAAGTNVVVR+P     VSV++EVESRVPGQTAEYSA EHRVVWTIKKFQGSSELTLRAKVTLP VVN A RKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFR
Sbjct:  219 GNPELRLALNEDLVVGKANAGSSFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFVLLNYRMNAEFRCPFRLFPSIGDIDPYRMEVVVIVRADMPETAAGTNVVVRLPMPRNAVSVSSEVESRVPGQTAEYSANEHRVVWTIKKFQGSSELTLRAKVTLPNVVNAANRKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFR 427          
BLAST of mRNA_H-paniculata_contig18098.4375.1 vs. uniprot
Match: A0A7S3MCI4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCI4_9STRA)

HSP 1 Score: 266 bits (681), Expect = 1.330e-87
Identity = 128/209 (61.24%), Postives = 164/209 (78.47%), Query Frame = 0
Query:    9 GNPELRLALNEDLVVGKANGTPSFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFALLNYRINAEFRCPFRLFPSIGDIDPYRMEVVVIVRGDMPETAAGTNVVVRVPXXXXXVSVNTEVESRVPGQTAEYSATEHRVVWTIKKFQGSSELTLRAKVTLPTVVNTAARKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFR 217
            GNPELRLALNEDLV+GK NG  S+GSVVLDDCNFHEC  LDEFES R L F PPDGEFA+LNYRI A++R PF+L+P+I +   Y+++V++++R D+PE   G+NV +R+P     VSV  E    +PG +AEY+A E +V++ I+KF GSSE++LRA++TL T V  A +KE+GP+SM FEIPMYNVSNLQVRYL+I+E  KSYNP R
Sbjct:    1 GNPELRLALNEDLVIGKGNG--SYGSVVLDDCNFHECVHLDEFESSRTLHFLPPDGEFAVLNYRITADYRAPFKLYPTIEESGTYKVDVIIVLRADIPEANYGSNVTLRLPVPRNTVSVLPEFSIEMPGCSAEYNANEKKVLFNIRKFNGSSEISLRARITLDTPVTAAHKKEIGPISMSFEIPMYNVSNLQVRYLRISETHKSYNPCR 207          
BLAST of mRNA_H-paniculata_contig18098.4375.1 vs. uniprot
Match: A0A7S2CZI0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CZI0_9STRA)

HSP 1 Score: 258 bits (660), Expect = 1.140e-83
Identity = 120/209 (57.42%), Postives = 152/209 (72.73%), Query Frame = 0
Query:    9 GNPELRLALNEDLVVGKANGTPSFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFALLNYRINAEFRCPFRLFPSIGDIDPYRMEVVVIVRGDMPETAAGTNVVVRVPXXXXXVSVNTEVESRVPGQTAEYSATEHRVVWTIKKFQGSSELTLRAKVTLPTVVNTAARKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFR 217
            GNPELRLALNEDLV+GK     ++GSV LDDCNFHEC +L +FE+ R LSF PPDGEF +LNYR+  EFR PFR+FP+I ++ PY+++V +  R D+PET  G NVV+R+P      S   E+     GQ AE+S T   V WTIKKFQG++E T+R K+TL     T  RKE+GP+S+ FE+PMYNVSNL VRYL+IAE  K+YNP+R
Sbjct:   62 GNPELRLALNEDLVIGKGG---AYGSVTLDDCNFHECVQLQDFETSRTLSFIPPDGEFVVLNYRVTGEFRAPFRVFPAIDEVSPYKLDVTIRCRADIPETNYGANVVIRIPVPRNTASAGCELAQNAVGQQAEFSNTAKHVTWTIKKFQGNTEQTIRVKITLSDPATTNTRKEIGPISLNFEVPMYNVSNLAVRYLRIAEQGKAYNPYR 267          
BLAST of mRNA_H-paniculata_contig18098.4375.1 vs. uniprot
Match: A0A835YW81_9STRA (Coatomer protein complex, gamma sub-unit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW81_9STRA)

HSP 1 Score: 257 bits (656), Expect = 7.300e-81
Identity = 123/210 (58.57%), Postives = 160/210 (76.19%), Query Frame = 0
Query:    9 GNPELRLALNEDLVVGKANGTPSFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFALLNYRINAEFRCPFRLFPSIGDIDPYRMEVVVIVRGDMPETAAGTNVVVRVPXXXXXVSVNTEVESR-VPGQTAEYSATEHRVVWTIKKFQGSSELTLRAKVTLPTVVNTAARKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFR 217
            GNPEL+LALNEDLV+G+   T ++G+VVLDDCNFHEC +LD+FES RQL+  PPDGEF  LNYRI AEFR PFR+FPS+ + D   +E++++VR DMPE   G+NVVV VP      +V+ E++ R +PGQ+AEY+AT  RV WTIK+FQG +E +LR +VTL        R+E+GP+S  FE+PMY+VS LQVRYLKIA+  K+YNP+R
Sbjct:  218 GNPELKLALNEDLVIGRGQ-TSTYGAVVLDDCNFHECVRLDDFESGRQLTLVPPDGEFVALNYRITAEFRAPFRMFPSVTETDALHLELLLLVRADMPEAQYGSNVVVSVPVPRAAGTVSAEIDPRALPGQSAEYNATAKRVDWTIKRFQGGTEQSLRVRVTLTQPCTATTRRELGPISASFEVPMYSVSGLQVRYLKIADAGKAYNPYR 426          
BLAST of mRNA_H-paniculata_contig18098.4375.1 vs. uniprot
Match: A0A7S2UX12_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX12_9STRA)

HSP 1 Score: 257 bits (657), Expect = 9.690e-81
Identity = 123/209 (58.85%), Postives = 155/209 (74.16%), Query Frame = 0
Query:    9 GNPELRLALNEDLVVGKANGTPSFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFALLNYRINAEFRCPFRLFPSIGDIDPYRMEVVVIVRGDMPETAAGTNVVVRVPXXXXXVSVNTEVESRVPGQTAEYSATEHRVVWTIKKFQGSSELTLRAKVTLPTVVNTAARKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFR 217
            GNPELRLALN+DLV+GK  G   +GSVVLDDCNFHE  +LD FE  R LS  PPDGEF +LNYR+ +EFR PFRLFP+I ++ PY++E+V++VR D+PE+  G NV V +P      S   E+   V GQ+ EY   E ++VWTIKKF G +E  LRAK+TL +    AAR+E+GP+SM FEIPMYNVS+LQVRYL+IAE  K+YNP+R
Sbjct:  244 GNPELRLALNDDLVIGKGGG--QYGSVVLDDCNFHEAVRLDSFEMSRTLSLVPPDGEFVVLNYRVTSEFRTPFRLFPAIEEVSPYKLELVLMVRADIPESNYGANVTVTIPVPRTAASATGEMGENVVGQSCEYDQGERKLVWTIKKFPGGTEQGLRAKITLASATAPAARREIGPISMGFEIPMYNVSHLQVRYLRIAEADKTYNPYR 450          
BLAST of mRNA_H-paniculata_contig18098.4375.1 vs. uniprot
Match: A0A812WLM7_SYMMI (AP4M protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WLM7_SYMMI)

HSP 1 Score: 251 bits (642), Expect = 8.090e-79
Identity = 117/209 (55.98%), Postives = 157/209 (75.12%), Query Frame = 0
Query:    9 GNPELRLALNEDLVVGKANGTPSFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFALLNYRINAEFRCPFRLFPSIGDIDPYRMEVVVIVRGDMPETAAGTNVVVRVPXXXXXVSVNTEVESRVPGQTAEYSATEHRVVWTIKKFQGSSELTLRAKVTLPTVVNTAARKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFR 217
            GNPELRLALNEDLV+GK +   ++GSVV+DDCNFHEC +LDEFE+ R L F PPDGEF +LNYRI  +FR PFRLFPSI +  PY+++V+ +VR ++PE   G  VV+ +P      SV+ E+   +PG +AE+ ++  +V WTI+K  G+SEL +R K+TL      A ++E+GP++MQFEIPMYNVSNLQV+YL+I+E  KSYNP+R
Sbjct:  217 GNPELRLALNEDLVIGKGS---TYGSVVMDDCNFHECVRLDEFEASRTLHFVPPDGEFTVLNYRITGDFRSPFRLFPSIEETGPYKLDVLCLVRAEIPEGNHGAGVVINIPVPRATASVSFEMSVNMPGSSAEFISSSKKVQWTIRKMVGASELAIRCKLTLDQPATAAHKREIGPIAMQFEIPMYNVSNLQVKYLRISETHKSYNPYR 422          
BLAST of mRNA_H-paniculata_contig18098.4375.1 vs. uniprot
Match: A0A6A7GCG2_9CRUS (AP-4 complex subunit mu-1 n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GCG2_9CRUS)

HSP 1 Score: 248 bits (634), Expect = 1.650e-77
Identity = 118/211 (55.92%), Postives = 155/211 (73.46%), Query Frame = 0
Query:    9 GNPELRLALNEDLVVGKAN--GTPSFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFALLNYRINAEFRCPFRLFPSIGDIDPYRMEVVVIVRGDMPETAAGTNVVVRVPXXXXXVSVNTEVESRVPGQTAEYSATEHRVVWTIKKFQGSSELTLRAKVTLPTVVNTAARKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFR 217
            GNPELRLALNEDLV+GK+N  G+  +G+VVLDDCNFHEC +L+EF++ R LSF PPDGEF++LNYR+  EFR PFR+FP    + PY++E+++ +R D+PE   G NV+V+ P      SV+ ++     GQ +EYSA + +V W IKKF G +E TLR K+TL +   T  RKE+GP+SM FEIPM+N S LQVRYL+I E  KSYNP+R
Sbjct:  221 GNPELRLALNEDLVIGKSNVTGSGGYGNVVLDDCNFHECVRLEEFDATRTLSFQPPDGEFSVLNYRVTGEFRAPFRIFPFFELVTPYKIELIIKIRADVPEQNYGGNVLVQFPVPKATTSVSCDLGLGTIGQASEYSAVDKKVFWKIKKFGGGTEQTLRVKITLGSQHTTIVRKEIGPISMTFEIPMFNASGLQVRYLRIMESRKSYNPYR 431          
BLAST of mRNA_H-paniculata_contig18098.4375.1 vs. uniprot
Match: A0A7S2N1G3_9DINO (Hypothetical protein n=2 Tax=Alexandrium TaxID=2924 RepID=A0A7S2N1G3_9DINO)

HSP 1 Score: 247 bits (631), Expect = 3.950e-77
Identity = 123/213 (57.75%), Postives = 156/213 (73.24%), Query Frame = 0
Query:    9 GNPELRLALNEDLVVGKAN--GTPSFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFALLNYRINAEFRCPFRLFPSIGDIDPYRMEVVVIVRGDMPETAAGTNVVVRVPXXXXXVSVNTEVESRVPGQTAEYSATEHRVVWTIKKFQGSSELTLRAKVTLPTVV--NTAARKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFR 217
            GNPEL+LALNED+ +   N  G   +G+VVLDDCNFHEC  L++F   R LS  PPDGEFA++NYRI  +FR PFR+FP +    P+++EV + VR D+PE   G NV +         SV+TE+ S++ GQTAEY ATEHR+VW IKKFQG+SE +++A+VTL + V  N+  +KEVGPVS+ FEIPMYNVSNLQVRYL+IAE  KSYNP R
Sbjct:  213 GNPELKLALNEDITIKNQNIGGHGGYGAVVLDDCNFHECVDLEDFADQRTLSLYPPDGEFAVMNYRITGDFRVPFRIFPFVEQQTPHKLEVTIKVRADIPEQNYGGNVQISCAMPKSAASVSTELGSQITGQTAEYLATEHRLVWNIKKFQGASECSIKARVTLSSPVGSNSNVKKEVGPVSLSFEIPMYNVSNLQVRYLRIAERHKSYNPCR 425          
BLAST of mRNA_H-paniculata_contig18098.4375.1 vs. uniprot
Match: A0A7S2SFF0_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SFF0_9STRA)

HSP 1 Score: 245 bits (625), Expect = 3.410e-76
Identity = 120/211 (56.87%), Postives = 158/211 (74.88%), Query Frame = 0
Query:    9 GNPELRLALNEDLVVGKANGTPSFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFALLNYRINAEFRCPFRLFPSIGDIDPYRMEVVVIVRGDMPETAAGTNVVVRVPXXXXXVSVNTEVESRVP--GQTAEYSATEHRVVWTIKKFQGSSELTLRAKVTLPTVVNTAARKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFR 217
            GNP LRLALNEDLVVGK +G+ ++GSVVLDDCNFHEC +LDEFE+MR L+F PPDGEF ++NYRI+ EF  PFR++P I +  P ++EV+V +R D+P    G N+ V +P       V+  V+S V   GQ+AEY   E++VVW+IKKFQG SE T+RAK+ L   ++ A R+E+GPVS+ FEIPM+NVSNLQV+YL+I E  ++YNP R
Sbjct:  219 GNPPLRLALNEDLVVGKGDGS-NYGSVVLDDCNFHECVRLDEFETMRTLNFVPPDGEFVVMNYRISNEFVAPFRVYPFIEEATPTQIEVIVKIRADIPVNHFGANMTVTIPVPAKSNGVSARVDSGVSATGQSAEYRPKENKVVWSIKKFQGGSEHTVRAKIDLKEPISAAVRREIGPVSLNFEIPMFNVSNLQVKYLRIVEQNRTYNPHR 428          
BLAST of mRNA_H-paniculata_contig18098.4375.1 vs. uniprot
Match: A0A7S4A8F1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A8F1_9STRA)

HSP 1 Score: 241 bits (614), Expect = 1.140e-74
Identity = 115/209 (55.02%), Postives = 156/209 (74.64%), Query Frame = 0
Query:    9 GNPELRLALNEDLVVGKANGTPSFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFALLNYRINAEFRCPFRLFPSIGDIDPYRMEVVVIVRGDMPETAAGTNVVVRVPXXXXXVSVNTEVESRVPGQTAEYSATEHRVVWTIKKFQGSSELTLRAKVTLPTVVNTAARKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFR 217
            GNPELRLALNEDLVVGK  G P +G+VVLDDCNFHEC +LD+FE+ R LSF PP+GEF +LNYR   +FR PFR+ P I +  PY++E++V+VR ++P+T  G++V + VP      + +    S   G +A+Y+AT+ ++ + +KKFQG  EL  RAK+TL ++     RKE+GPVSM FEIPMYNVSNLQV+YL+IAE +++YNP+R
Sbjct:  214 GNPELRLALNEDLVVGK--GGP-YGTVVLDDCNFHECVRLDDFEAQRLLSFVPPEGEFVVLNYRTAGDFRAPFRVLPQIEEATPYQLEIIVLVRSEIPDTNYGSDVTITVPCPRNCTAASATAPS---GSSADYNATQRKLTFHVKKFQGGLELAFRAKITLSSICTAQTRKEIGPVSMTFEIPMYNVSNLQVKYLRIAEASQNYNPYR 416          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18098.4375.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJR2_ECTSI1.090e-12991.39Coatomer protein complex, gamma sub-unit n=1 Tax=E... [more]
A0A7S3MCI4_9STRA1.330e-8761.24Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2CZI0_9STRA1.140e-8357.42Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A835YW81_9STRA7.300e-8158.57Coatomer protein complex, gamma sub-unit n=1 Tax=T... [more]
A0A7S2UX12_9STRA9.690e-8158.85Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A812WLM7_SYMMI8.090e-7955.98AP4M protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A6A7GCG2_9CRUS1.650e-7755.92AP-4 complex subunit mu-1 n=1 Tax=Hirondellea giga... [more]
A0A7S2N1G3_9DINO3.950e-7757.75Hypothetical protein n=2 Tax=Alexandrium TaxID=292... [more]
A0A7S2SFF0_9STRA3.410e-7656.87Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S4A8F1_9STRA1.140e-7455.02Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001392Clathrin adaptor, mu subunitPRINTSPR00314CLATHRINADPTcoord: 150..161
score: 51.52
coord: 37..64
score: 53.57
NoneNo IPR availableGENE3D2.60.40.1170coord: 3..83
e-value: 2.0E-17
score: 65.0
NoneNo IPR availableGENE3D2.60.40.1170coord: 84..194
e-value: 1.1E-28
score: 101.5
NoneNo IPR availablePANTHERPTHR10529:SF270AP-4 COMPLEX SUBUNIT MU-1coord: 8..217
NoneNo IPR availablePANTHERPTHR10529LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDcoord: 8..217
IPR028565Mu homology domainPFAMPF00928Adap_comp_subcoord: 7..216
e-value: 1.7E-44
score: 152.2
IPR028565Mu homology domainPROSITEPS51072MHDcoord: 1..217
score: 28.096
IPR036168AP-2 complex subunit mu, C-terminal superfamilySUPERFAMILY49447Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptorcoord: 6..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18098contigH-paniculata_contig18098:2216..5070 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18098.4375.1mRNA_H-paniculata_contig18098.4375.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18098 2216..5070 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18098.4375.1 ID=prot_H-paniculata_contig18098.4375.1|Name=mRNA_H-paniculata_contig18098.4375.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=218bp
MSLWFTFQGNPELRLALNEDLVVGKANGTPSFGSVVLDDCNFHECAKLDE
FESMRQLSFTPPDGEFALLNYRINAEFRCPFRLFPSIGDIDPYRMEVVVI
VRGDMPETAAGTNVVVRVPLPRNAVSVNTEVESRVPGQTAEYSATEHRVV
WTIKKFQGSSELTLRAKVTLPTVVNTAARKEVGPVSMQFEIPMYNVSNLQ
VRYLKIAEFAKSYNPFR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001392Clathrin_mu
IPR028565MHD
IPR036168AP2_Mu_C_sf