mRNA_H-paniculata_contig18094.4374.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig18094.4374.1
Unique NamemRNA_H-paniculata_contig18094.4374.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig18094.4374.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY)

HSP 1 Score: 249 bits (637), Expect = 2.860e-70
Identity = 170/464 (36.64%), Postives = 236/464 (50.86%), Query Frame = 1
Query:    1 IFKRKLKEDGSVARYKARLVAQDFSQVEGEDFF--ETSAPVARMSTLRASFSLAAEQDFELEGMDVDAAYLNTPVEEELFVKLPPQFSPSSRDIPFLRRLRKILCGLKQNGRNWNNTLDDFLAGIGLDRSTTDSCLYFSRDDGGETDLLVAIYVDDIAIAGCRKKVDEFNHNISQRFRMKDLGSLWRVLGIEVRCDRPNGTITISQVSYIREILKISSFDECRAVPIPVE-----GRFRHPSRP------------------------TSP---------------PNRSHLGLIR---------------------------DAGWAEDVEDQKSTTGYVFKLNGGAISWCPRKQQLVTWSSLEAEYVAEGEAGKEVVYLREL------PGSIGF*CRRSTIIFEDNKSAIDLSKGSGAHCRTKHVRVRWYEIREWIREGIVAWKYMQTGDQLADISMKGLSR 1155
            +F+ K   +G+V+ +KARLVAQ FSQV G D+   ET APV+R+ ++R   SLAA  D+EL  MDV +AYLN  +EE ++++LPP F+P  +    + RL+K L GLKQ GR W  TL   +  +G  R   D  +++ R+  GE+ ++VA  VDD+ I G    VD F  +I QRF M DLG L  +LGIEVR DR   TI ISQ SYI  I+   + DE   + IP++     G  + PS P                        T P               P R+H   ++                           DA W    E + S +GYVF L+GGAISW  +KQ +V  SS EAEY+A   A KE ++LR +      P    F  R    +  DN+SAI L+K +  H RTKH+ +R++ IRE +    +  ++ +T D  AD+  K L R
Sbjct: 1077 VFRVKHDAEGAVSGFKARLVAQGFSQVPGRDYHDDETFAPVSRLPSIRTILSLAARHDWELRQMDVKSAYLNGILEETVYMRLPPGFAPPEQS-HLVCRLKKTLYGLKQAGRGWYKTLTAAMENMGFTRCVADHAVFYKRE--GESAIIVAASVDDLTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQPGSPLGNHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDITFAVTALSQFMQNPGRAHWDALKRVLRYLKGSRELWLVYGTNNEGLRGYSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHATKEAIWLRYVLSDILHPELATFPVR----LHSDNRSAIALAKDNAFHSRTKHIDIRFHFIREAVDNRDIVLEHRRTEDMPADLFTKALPR 1533          
BLAST of mRNA_H-paniculata_contig18094.4374.1 vs. uniprot
Match: A0A6A3CSP3_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3CSP3_HIBSY)

HSP 1 Score: 245 bits (625), Expect = 8.910e-69
Identity = 137/394 (34.77%), Postives = 227/394 (57.61%), Query Frame = 1
Query:    1 IFKRKLKEDGSVARYKARLVAQDFSQVEGEDFFETSAPVARMSTLRASFSLAAEQDFELEGMDVDAAYLNTPVEEELFVKLPPQFSPSSRDIPFLRRLRKILCGLKQNGRNWNNTLDDFLAGIGLDRSTTDSCLYFSRDDGGETDLLVA-IYVDDIAIAGCRKK-VDEFNHNISQRFRMKDLGSLWRVLGIEVRCDRPNGTITISQVSYIREILKISSFDECRAV--PIPVEGRFRHPSRPTSPPNRSHLG------LIRDAGWAEDVEDQKSTTGYVFKLNGGAISWCPRKQQLVTWSSLEAEYVAEGEAGKEVVYLRELPGSIGF*CRRSTIIFEDNKSAIDLSKGSGAHCRTKHVRVRWYEIREWIREGIVAWKYMQTGDQLADISMKGLS 1152
            +FK K   D  V RY+ARLV + ++Q EG DF E  +PV R++T+R   ++ A  +  LE +DV   +L+  +EE++++  P  F    +    + RL K L GLKQ  R W    D F+  +G +R   D C YF R   G+ D ++  +YVDD+ +AG  K  ++E    +++ F MKDLGS  ++LG+++  DR N  I +SQ  Y+++IL + S  +C+ +  P+P+  +      P+S      +        + ++ +A D++  KSTTGYVFK+ GGA+SW  + Q +V  S+ EAEYVA  +A KE ++L++L   +G   +    +F D++SA+ L++    H RTK++RV ++ IRE ++EG +  + + T D +AD   K ++
Sbjct:  768 VFKIKRNGDDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVVLAMCATFNLHLEQLDVKTTFLHGNLEEDIYMLQPEGFEEDKKK-NLVCRLNKSLYGLKQATRCWYKRFDSFIMCLGYNRLNADPCAYFKRS--GDNDFVILMLYVDDMLVAGPNKDHIEELKAQLAREFEMKDLGSANKILGMQIHRDRSNRKIWLSQKIYLKKILSLFSMQDCKPISTPLPINFKLSSSMSPSSEEEMMEMSRVPYASAVGNSDYAGDLDKSKSTTGYVFKVAGGAVSWVSKLQSIVATSTTEAEYVAATQASKEAIWLKDLLEELGH-NQEYVSLFCDSQSALHLARNPAFHSRTKNIRVHYHFIREKVKEGTIDMQKIHTKDNIADFMTKAIN 1157          
BLAST of mRNA_H-paniculata_contig18094.4374.1 vs. uniprot
Match: A0A060S825_PYCCI (CCHC-type domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060S825_PYCCI)

HSP 1 Score: 240 bits (613), Expect = 4.480e-67
Identity = 161/458 (35.15%), Postives = 238/458 (51.97%), Query Frame = 1
Query:    1 IFKRKLKEDGSVARYKARLVAQDFSQVEGEDFFETSAPVARMSTLRASFSLAAEQDFELEGMDVDAAYLNTPVEEELFVKLPPQFSPSSRDIPFLRRLRKILCGLKQNGRNWNNTLDDFLAGIGLDRSTTDSCLYFSRDDGGETDLLVAIYVDDIAIAGCRKKVDEFNHNISQRFRMKDLGSLWRVLGIEVRCDRPNGTITISQVSYIREILKISSFDECRAVPIPVEG-----RFRHPSRP------------------------TSP---------------PNRSHLGLIR---------------------------DAGWAEDVEDQKSTTGYVFKLNGGAISWCPRKQQLVTWSSLEAEYVAEGEAGKEVVYLRELPGSIGF*--CRRSTIIFEDNKSAIDLSKGSGAHCRTKHVRVRWYEIREWIREGIVAWKYMQTGDQLADISMKGLSR 1155
            +F+ K   DGS+ ++KARLVAQ ++Q+ G DF ET APVA++S++R   +LAA  D+ELE M+V +AYLN  ++EE++++ PP  +P+  +   +  L+K L GLKQ GR W  TL + +A +G  R  +D  +++ R   G++ ++VA  VD + IAG R  V +F   IS RF M DLG++  +LGIEV+ DR   TI ISQ +YI  +    + +    V  P++      R + PS P                        T P               P R+H   ++                           DA W    E + S +GYVF L+GGAISW  +KQ +V  SS EAEY+A   A KE ++LR L   I      R    +F DN+SAI L+K +  H RTKH+ +R++ IRE + +  +  ++ +T D  AD+  K L R
Sbjct: 1013 VFRIKRDADGSITQFKARLVAQGYTQMPGVDFNETFAPVAKLSSIRTILALAARYDWELEQMEVKSAYLNGRLDEEIYMRQPPGSAPAGLE-HLVCCLKKTLYGLKQAGRGWYKTLSNRMAEMGFTRCASDHAVWYKR--AGDSIVIVASSVDHLTIAGTRDFVMDFKSAISARFEMSDLGAMRWILGIEVQRDRQARTIAISQRTYIDTVAARFNLETANPVSTPLQPGGVLTRSQSPSTPHQVADMSNVPYREAVGSLMYAVMGTRPDIAFAVTTLSQFMQNPGRAHWEAVKRVIRYLVGTRELWLVYGTSDDGIQGFSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHAAKEALWLRYLLSDIIHPDISRYPLTLFSDNRSAIALAKDNAFHPRTKHIDIRFHFIREAVDDEKIILQHRRTEDMPADLFTKALPR 1467          
BLAST of mRNA_H-paniculata_contig18094.4374.1 vs. uniprot
Match: J9KJ72_ACYPI (Integrase catalytic domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9KJ72_ACYPI)

HSP 1 Score: 239 bits (609), Expect = 1.280e-66
Identity = 146/449 (32.52%), Postives = 233/449 (51.89%), Query Frame = 1
Query:    1 IFKRKLKEDGSVARYKARLVAQDFSQVEGEDFFETSAPVARMSTLRASFSLAAEQDFELEGMDVDAAYLNTPVEEELFVKLPPQFSPSSRDIPFLRRLRKILCGLKQNGRNWNNTLDDFLAGIGLDRSTTDSCLYFSRDDGGETDLLVAIYVDDIAIAGCRK-KVDEFNHNISQRFRMKDLGSLWRVLGIEVRCDRPNGTITISQVSYIREILKISSFDECRAVPIPVEGRFR----------HP--------------SRPT------------SPPNRSHLGLIR-----------------------------DAGWAEDVEDQKSTTGYVFKLNGGAISWCPRKQQLVTWSSLEAEYVAEGEAGKEVVYLRELPGSIGF*CRRSTIIFEDNKSAIDLSKGSGAHCRTKHVRVRWYEIREWIREGIVAWKYMQTGDQLADISMKGL 1149
            +FK K    GSV +YKARLVAQ FSQ EG D+++T +PVA+++TLR   ++A ++++ L+ +DV  A+L   + E+++++ P   + +S D+ F  +L K L GLKQ  + W+   D+++A +GL++S +D CLY   ++     + + +YVDDI IAG    K+ E    + + F M+D G L   LG+++  D+  G + I+Q  Y+ ++LK  + D C  +  P+E +             P              SRP             S PN  H   ++                             DA WA    D+KSTTGY+FK+    +SW  ++Q  V  SS EAEY+A   A  E +++R+L   +        I+FEDN+ AI LS     H R+KH+  + + +RE ++EG++  KY+ T +QLAD+  KGL
Sbjct:  820 VFKIKRDSIGSVKKYKARLVAQGFSQKEGVDYYDTYSPVAKLTTLRTLLAIAVQRNWFLQQLDVKTAFLYGILTEDIYIEQPEGLNYNS-DMIF--KLNKSLYGLKQASKCWHERFDNYIAKLGLEQSDSDQCLYILNNNNTHDIIYLLLYVDDIIIAGSNMLKIGEIKSYLKEEFEMEDNGDLNYFLGLKINYDKTVGKLYINQTQYLEDVLKKFNMDNCNTISTPIESKLNIEEDNKQECNQPYRQLVGSLMYAMLGSRPDLSYALNFFCRYQSKPNECHWNHLKRVLRYVKGTLNNGLCFHRQSNSTELIGFVDADWASSTIDRKSTTGYLFKVFNCLVSWSTKRQPTVALSSTEAEYMAVSNATCEAIWIRKLLKDLDVTICGPVILFEDNQGAIHLSSSQELHKRSKHIDTKHHFVREKVKEGLIELKYIPTSNQLADLLTKGL 1265          
BLAST of mRNA_H-paniculata_contig18094.4374.1 vs. uniprot
Match: A0A6A2Z680_HIBSY (Methyl esterase 17 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2Z680_HIBSY)

HSP 1 Score: 239 bits (609), Expect = 1.510e-66
Identity = 135/387 (34.88%), Postives = 221/387 (57.11%), Query Frame = 1
Query:    1 IFKRKLKEDGSVARYKARLVAQDFSQVEGEDFFETSAPVARMSTLRASFSLAAEQDFELEGMDVDAAYLNTPVEEELFVKLPPQFSPSSRDIPFLRRLRKILCGLKQNGRNWNNTLDDFLAGIGLDRSTTDSCLYFSRDDGGETDLLVAIYVDDIAIAGCRKK-VDEFNHNISQRFRMKDLGSLWRVLGIEVRCDRPNGTITISQVSYIREILKISSFDECRAV--PIPVEGRFRHPSRPTSPPNRSHLGLIRDAGWAEDVEDQKSTTGYVFKLNGGAISWCPRKQQLVTWSSLEAEYVAEGEAGKEVVYLRELPGSIGF*CRRSTIIFEDNKSAIDLSKGSGAHCRTKHVRVRWYEIREWIREGIVAWKYMQTGDQLADISMKGLS 1152
            +FK K   D  V RY+ARLV + ++Q EG DF E  +PV R++T+R   ++ A  +  LE +DV   +L+  +EEE+++  P  F    +    + RL K L GLKQ  R W    D F+  +G +R     C YF R  G    +++ +YVD + +AG  K  ++E    +++ F MKDLGS  ++LG+++  DR N  I +SQ +Y+++IL   +  +C+++  P+P+  +      P+S   R  +  +       D++  KSTTGYVFK+ GGA+SW  + Q +V  S++EAEYVA  +A KE ++L+ L   +G   +    +F D++S + L++    H RTKH+RV+++ IRE + EG V  + + T D +AD   K ++
Sbjct:  611 VFKIKRNGDDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVVLAMCATLNIHLEQLDVKTTFLHGNLEEEIYMLQPEGFEEKEKK-NLVCRLNKSLYGLKQAPRCWYKRFDSFIMCLGYNRLNAYPCAYFKRS-GDNNFVILLLYVDGMLVAGPNKDHIEELKAQLAREFEMKDLGSANKILGMQIHRDRSNRKIWLSQKNYLKKILSRFNMQDCKSISTPLPINFKLSSSMSPSSEEERMEMSRV------PDLDKSKSTTGYVFKVAGGAVSWVSKLQSVVATSTIEAEYVAATQASKEAIWLKMLFEELGH-NQEYVSLFCDSQSILHLARNLAFHSRTKHIRVQYHFIREKVEEGTVDMQKIHTKDNIADFITKAIN 988          
BLAST of mRNA_H-paniculata_contig18094.4374.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY)

HSP 1 Score: 238 bits (608), Expect = 2.050e-66
Identity = 165/459 (35.95%), Postives = 230/459 (50.11%), Query Frame = 1
Query:    1 IFKRKLKEDGSVARYKARLVAQDFSQVEGEDFFETSAPVARMSTLRASFSLAAEQDFELEGMDVDAAYLNTPVEEELFVKLPP-QFSPSSRDIPFLRRLRKILCGLKQNGRNWNNTLDDFLAGIGLDRSTTDSCLYFSRDDGGETDLLVAIYVDDIAIAGCRKKVDEFNHNISQRFRMKDLGSLWRVLGIEVRCDRPNGTITISQVSYIREILK------------------ISSFDECRAVPIPVE-----------GRFRHPSRPTSP---------------PNRSHLGLIR---------------------------DAGWAEDVEDQKSTTGYVFKLNGGAISWCPRKQQLVTWSSLEAEYVAEGEAGKEVVYLRELPGSIGF*--CRRSTIIFEDNKSAIDLSKGSGAHCRTKHVRVRWYEIREWIREGIVAWKYMQTGDQLADISMKGLSR 1155
            +F+ K   +G +  YKARLVAQ F+QV G DF ET APVA+++++R   +LAA  D+EL  MDV  AYLN  +EEE++++ PP Q  P    +  + RL++ L GLKQ+GR ++  +   L  +GL RS  D C+++ R++     LL+A+ VDD  IAG +  V  F   IS RF M DLG +  +LGIEVR DR   T+++SQ +YI  IL                   + S  +C + P   E           G   + +  T P               P R H    +                           DA W    E + S +GYVF L+GGA+SW  +KQ +V  SS EAEY+A   A KE ++LR L   +      R    +  DNKSAI L+K    H RTKH+ +R++ IRE +  G V  +Y +T D  ADI  K L R
Sbjct:  971 VFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKEHL--VCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIAGTKAAVFWFKREISTRFEMSDLGEMHWILGIEVRRDRDARTLSLSQRAYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREAIGSLMYAALGTRPDIAYAVTALSQFMQNPGRPHWEAAKRVFRYLAGTRERWLTFGETTDGVEGFSDADWGS-AEHRHSISGYVFLLDGGAVSWSAKKQNVVALSSTEAEYIAITHATKEALWLRSLLADVLHPDILRYPVRLHSDNKSAIALAKDDAYHARTKHIDIRFHFIRETVENGQVILQYRRTEDMPADIFTKVLPR 1426          
BLAST of mRNA_H-paniculata_contig18094.4374.1 vs. uniprot
Match: A0A2G8RW53_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RW53_9APHY)

HSP 1 Score: 238 bits (607), Expect = 3.120e-66
Identity = 166/462 (35.93%), Postives = 234/462 (50.65%), Query Frame = 1
Query:    1 IFKRKLKEDGSVARYKARLVAQDFSQVEGEDFF--ETSAPVARMSTLRASFSLAAEQDFELEGMDVDAAYLNTPVEEELFVKLPPQFSPSSRDIPFLRRLRKILCGLKQNGRNWNNTLDDFLAGIGLDRSTTDSCLYFSRDDGGETDLLVAIYVDDIAIAGCRKKVDEFNHNISQRFRMKDLGSLWRVLGIEVRCDRPNGTITISQVSYIREILKISSFDECRAVPIPVE-----GRFRHPSRP------------------------TSP---------------PNRSHLGLIR---------------------------DAGWAEDVEDQKSTTGYVFKLNGGAISWCPRKQQLVTWSSLEAEYVAEGEAGKEVVYLREL------PGSIGF*CRRSTIIFEDNKSAIDLSKGSGAHCRTKHVRVRWYEIREWIREGIVAWKYMQTGDQLADISMKGL 1149
            +F+ K   +G+V+ +KARLVAQ FSQV G D+   ET APV+R+ ++R   +LAA  D+EL  MDV +AYLN  +EE +++  PP FS   +    + RL+K L GLKQ GR W  TL   +  +G  R   D  +++ R+  GE+ ++VA  VDD+ IAG    V+ F  +I QRF M DLG+L  +LGIEVR D    TI ISQ SYI   +   + ++   + IP++     G+ + PS P                        T P               P R+H   I+                           DA W   +E + S +GYVF L+GGAISW  +KQ +V  SS EAEY+A   A KE ++LR +      P    F  R    +  DN+SAI L+K +  H RTKH+ +R++ IRE +    VA +Y +T D   D+  K L
Sbjct: 1860 VFRVKHNVEGTVSGFKARLVAQGFSQVPGRDYHDDETFAPVSRLPSIRTILALAARHDWELRQMDVKSAYLNGTLEETVYMHQPPSFSMPEQS-HLVCRLKKTLYGLKQAGRGWYKTLTAAMLQMGFTRCVADHAVFYKRE--GESAIIVAASVDDLTIAGTSDLVNAFAADIKQRFEMSDLGNLHWILGIEVRRDCQARTIAISQRSYIDTTVSRFNLEDAAPLSIPLQPGSPLGQHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDVTFAVTALSQFMQNPGRAHWDAIKRVLRYLKGTRELWLVYGDDNNGLHSFSDADWGSSMEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHATKEAIWLRYVLADVLHPELSSFPVR----LCSDNRSAIALAKDNAFHPRTKHIDIRYHFIREAVDNHNVALEYRRTEDMPTDLFTKAL 2314          
BLAST of mRNA_H-paniculata_contig18094.4374.1 vs. uniprot
Match: A0A5S6Q3I8_TRIMR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6Q3I8_TRIMR)

HSP 1 Score: 228 bits (582), Expect = 3.830e-66
Identity = 150/452 (33.19%), Postives = 222/452 (49.12%), Query Frame = 1
Query:    1 IFKRKLKEDGSVARYKARLVAQDFSQVEGEDFFETSAPVARMSTLRASFSLAAEQDFELEGMDVDAAYLNTPVEEELFVKLPPQFSPSSRDIPFLRRLRKILCGLKQNGRNWNNTLDDFLAGIGLDRSTTDSCLYFSRDDGGETDLLVAIYVDDIAIAGCRKKVD-EFNHNISQRFRMKDLGSLWRVLGIEVRCDRPNGTITISQVSYIREILKISSFDECRAVPIPVEGRF------------------------------------------RHPSRPTSPPNRSHLGLIR------------------------DAGWAEDVEDQKSTTGYVFKLNGGAISWCPRKQQLVTWSSLEAEYVAEGEAGKEVVYLRELPGSIGF*CRRSTIIFEDNKSAIDLSKGSGAHCRTKHVRVRWYEIREWIREGIVAWKYMQTGDQLADISMKGLSR 1155
            +FK K   +G    YKARLVA+ FSQ  GED+ ET APV +  T+R   SLAA Q   +  +DV AAYLN+P+EEEL+VK PP F    ++   L  LRK L GLKQ+ R WN    D L  +G +++  D CL+  ++  G    ++ IYVDD+ + G   K+  E    + + F+ KDLG +   LGI++  +  +G+I + Q + I ++L+     EC+  P P+E  F                                          RH  +PT    ++   ++R                        DA WA D  D+KSTTG+VF+L    ++W  RKQ +V  SS EAEY+A   A +E+++LR+L   +G   +  TII EDN++ I +        RTKHV V  + +R+   +G +  +Y  +    ADI  K L +
Sbjct:   77 VFKVKPNSEGQADTYKARLVARGFSQRYGEDYDETFAPVVKHDTVRVLLSLAAAQKLHVRHLDVKAAYLNSPLEEELYVKQPPGFEVQGQEHKVLL-LRKSLYGLKQSARAWNKMATDTLTSLGFEQAMADHCLFSKKEKNGSRTYIL-IYVDDLLVVGATPKITKEVGIQMDKFFQTKDLGEVKNYLGIQIEREG-DGSILLHQRNKIEQLLEQYGLMECKPAPTPMETGFLSVNQESPPMPDNTKYRQAIGSLLYVATVSRPDIAAPVGFLCRHVEKPTEADWKAVKRVMRYLAATKYMTLRLSSAGGIDLQCYVDADWAGDKADRKSTTGFVFQLGKNTVAWSSRKQSVVALSSTEAEYLAVSHACRELLWLRQLLKDLGIAVKDPTIIHEDNQACIKMVNSERYGARTKHVDVCHHHVRDLRAQGTIKLQYCPSDKMRADILTKPLCK 525          
BLAST of mRNA_H-paniculata_contig18094.4374.1 vs. uniprot
Match: A0A1C7MSU6_GRIFR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Grifola frondosa TaxID=5627 RepID=A0A1C7MSU6_GRIFR)

HSP 1 Score: 231 bits (590), Expect = 1.790e-65
Identity = 148/452 (32.74%), Postives = 227/452 (50.22%), Query Frame = 1
Query:    1 IFKRKLKEDGSVARYKARLVAQDFSQVEGEDFFETSAPVARMSTLRASFSLAAEQDFELEGMDVDAAYLNTPVEEELFVKLPPQFSPSSRDIPFLRRLRKILCGLKQNGRNWNNTLDDFLAGIGLDRSTTDSCLYFSRDDGGETDLLVAIYVDDIAI-AGCRKKVDEFNHNISQRFRMKDLGSLWRVLGIEVRCDRPNGTITISQVSYIREILKISSFDECRAVPIPVEGRFR----HPSRPTSPPNRSHLGLIR--------------------------------------------------------------DAGWAEDVEDQKSTTGYVFKLNGGAISWCPRKQQLVTWSSLEAEYVAEGEAGKEVVYLRELPGSIGF*CRRSTIIFEDNKSAIDLSKGSGAHCRTKHVRVRWYEIREWIREGIVAWKYMQTGDQLADISMKGLSR 1155
            +F+ K   DG + +YKAR+VA+ F+QVEG D+ +T APV + +++RA  +LAA+ D E+  MDV +A+LN  ++EE+F+  PP F   +R+I +  +LRK L GLKQ  R W   +      +G  RS  D  +++  +DG    L+VA+Y+DD+ I       V+    ++   + M DLG   R+L I++  DR   TI ++Q  Y+  IL      +CR V  P+    +      +   + P +S LG +                                                               DA WA DV D++S TGYV+ ++G AISW  +KQ     SS EAEY+A   A KE ++LR     I      +T++  DN+SA+ L+K +  H RTKH+ VR + IR+ + EG +  +Y+ TGDQ+AD+  K L+R
Sbjct:  331 VFRIKRGPDGEIEKYKARVVAKGFTQVEGVDYTDTFAPVTKFASIRALLALAAKLDLEIHQMDVKSAFLNGNLDEEIFMACPPGFQ-GARNIVW--QLRKALYGLKQASREWYKKIRAEFESLGFTRSNADHSVFYKNEDG--VLLIVAVYIDDMLIFCNSLPAVEALKADLGSHYDMTDLGEARRILNIKIIRDRARRTIELTQRQYVESILTHQGMADCRPVSTPMAQNLKLLKLSDAEIDATPYQSALGSLMYAMLGTRPDLAFAVGALSKHAAHPGEEHWTALMHVYKYLRATTDLRLVYDGNAKGEFPLCYVDANWASDVNDRRSVTGYVYIMSGAAISWSSKKQPSTALSSTEAEYMAMAGATKEALWLRTFLDEIQQLPAAATLLLVDNQSAMALAKNAAFHDRTKHIAVRHHFIRDELEEGHIRAEYVPTGDQVADVLTKALAR 777          
BLAST of mRNA_H-paniculata_contig18094.4374.1 vs. uniprot
Match: A0A2N9F319_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9F319_FAGSY)

HSP 1 Score: 235 bits (600), Expect = 2.680e-65
Identity = 139/420 (33.10%), Postives = 233/420 (55.48%), Query Frame = 1
Query:   13 KLKEDGS--VARYKARLVAQDFSQVEGEDFFETSAPVARMSTLRASFSLAAEQDFELEGMDVDAAYLNTPVEEELFVKLPPQFSPSSRDIPFLRRLRKILCGLKQNGRNWNNTLDDFLAGIGLDRSTTDSCLYFSRDDGGETDLLVAIYVDDIAIAGCRK-KVDEFNHNISQRFRMKDLGSLWRVLGIEVRCDRPNGTITISQVSYIREILKISSFDECRAVPIPVEGRFRHPSR--PTSPPNRSHLGLIR-----------------------------------DAGWAEDVEDQKSTTGYVFKLNGGAISWCPRKQQLVTWSSLEAEYVAEGEAGKEVVYLRELPGSIGF*CRRSTIIFEDNKSAIDLSKGSGAHCRTKHVRVRWYEIREWIREGIVAWKYMQTGDQLADISMKGLS 1152
            K+K DG+  V RY+ARLV + F+Q EG DF E  +PV R++T+R   ++ A  D  LE +DV  A+L+  +EEE+++  P  F    ++   + +L K L GLKQ  R W    D F+  +G +R ++D C+Y+ R   G   +++ +YVDD+ +AG  K ++ +    +++ F MKDLG   ++LG+++  DR N  I +SQ +Y+++IL+  +  +C+ +P P+   F+  S   P++   R  +  +                                    D+ +A D++  KST+GYVF L GGA+SW  + Q +V  S+ EAEYVA  +A KE ++L+ L   +G   +    +F D++SA+ L+K    H +TKH+RV+++ +RE + EG V  + + T D LAD+  K ++
Sbjct:  847 KIKRDGNDQVERYRARLVVKGFAQKEGIDFNEIFSPVVRLTTVRVVLAMCATFDLYLEQLDVKTAFLHGELEEEIYMLQPEGFEEKGKE-NLVCKLNKSLYGLKQAPRCWYKRFDSFIMSLGYNRHSSDPCVYYKRFGDGNF-IILLLYVDDMLVAGPNKDRITDLKAQLAREFEMKDLGPANKILGMQIYRDRNNRKIWLSQKNYLKKILRRFNMQDCKPIPTPLPINFKLSSSMSPSNEAERMEMSRVPYASAVGSLMFAMVCTRPDIAQAVGSGSDFTVRGYVDSDYAGDLDKSKSTSGYVFTLAGGAVSWVSKLQSIVATSTTEAEYVAATQASKEAIWLQMLLEELGH-KQEKIALFCDSQSALHLAKNPAFHSKTKHIRVQYHFVREKVEEGSVDIQKIHTKDNLADMLTKPIN 1263          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18094.4374.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2G8RWY5_9APHY2.860e-7036.64Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
A0A6A3CSP3_HIBSY8.910e-6934.77Uncharacterized protein n=1 Tax=Hibiscus syriacus ... [more]
A0A060S825_PYCCI4.480e-6735.15CCHC-type domain-containing protein n=1 Tax=Pycnop... [more]
J9KJ72_ACYPI1.280e-6632.52Integrase catalytic domain-containing protein n=1 ... [more]
A0A6A2Z680_HIBSY1.510e-6634.88Methyl esterase 17 n=1 Tax=Hibiscus syriacus TaxID... [more]
A0A401GN13_9APHY2.050e-6635.95Uncharacterized protein n=1 Tax=Sparassis crispa T... [more]
A0A2G8RW53_9APHY3.120e-6635.93Integrase catalytic domain-containing protein n=1 ... [more]
A0A5S6Q3I8_TRIMR3.830e-6633.19Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1C7MSU6_GRIFR1.790e-6532.74Retrovirus-related Pol polyprotein from transposon... [more]
A0A2N9F319_FAGSY2.680e-6533.10Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18094contigH-paniculata_contig18094:3735..5160 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score162.2
Seed ortholog evalue3.6e-37
Seed eggNOG ortholog164328.Phyra87462
Hectar predicted targeting categoryother localisation
EggNOG free text desc.gag-polypeptide of LTR copia-type
EggNOG OGs3QHJF@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons2
Model size1155
Cds size831
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18094.4374.1prot_H-paniculata_contig18094.4374.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig18094 3936..5037 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929408.5587163-UTR-H-paniculata_contig18094:3734..39351622929408.5587163-UTR-H-paniculata_contig18094:3734..3935Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig18094 3735..3935 -
1691480848.5301955-UTR-H-paniculata_contig18094:3734..39351691480848.5301955-UTR-H-paniculata_contig18094:3734..3935Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig18094 3735..3935 -
1622929408.5927303-UTR-H-paniculata_contig18094:5037..51601622929408.5927303-UTR-H-paniculata_contig18094:5037..5160Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig18094 5038..5160 -
1691480848.583648-UTR-H-paniculata_contig18094:5037..51601691480848.583648-UTR-H-paniculata_contig18094:5037..5160Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig18094 5038..5160 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929408.5726626-CDS-H-paniculata_contig18094:3935..41461622929408.5726626-CDS-H-paniculata_contig18094:3935..4146Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18094 3936..4146 -
1691480848.549565-CDS-H-paniculata_contig18094:3935..41461691480848.549565-CDS-H-paniculata_contig18094:3935..4146Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18094 3936..4146 -
1622929408.5828328-CDS-H-paniculata_contig18094:4417..50371622929408.5828328-CDS-H-paniculata_contig18094:4417..5037Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18094 4418..5037 -
1691480848.563781-CDS-H-paniculata_contig18094:4417..50371691480848.563781-CDS-H-paniculata_contig18094:4417..5037Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18094 4418..5037 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig18094.4374.1

>prot_H-paniculata_contig18094.4374.1 ID=prot_H-paniculata_contig18094.4374.1|Name=mRNA_H-paniculata_contig18094.4374.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=277bp
MSTLRASFSLAAEQDFELEGMDVDAAYLNTPVEEELFVKLPPQFSPSSRD
IPFLRRLRKILCGLKQNGRNWNNTLDDFLAGIGLDRSTTDSCLYFSRDDG
GETDLLVAIYVDDIAIAGCRKKVDEFNHNISQRFRMKDLGSLWRVLGIEV
RCDRPNGTITISQVSYIREILKISSFDECRAVPIPVEGRFRHPSRPTSPP
NRSHLGLIRDAGWAEDVEDQKSTTGYVFKLNGGAISWCPRKQQLVTWSSL
EAEYVAEGEAGKEVVYLRELPGSIGF*
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mRNA from alignment at H-paniculata_contig18094:3735..5160-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig18094.4374.1 ID=mRNA_H-paniculata_contig18094.4374.1|Name=mRNA_H-paniculata_contig18094.4374.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1426bp|location=Sequence derived from alignment at H-paniculata_contig18094:3735..5160- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATTTTCAAGCGGAAACTGAAGGAGGACGGCAGCGTGGCACGCTACAAAGC GCGACTAGTGGCTCAAGACTTTTCACAGGTGGAGGGTGAAGATTTCTTTG AGACCAGTGCCCCCGTAGCTCGCATGTCGACGTTACGTGCTTCTTTTAGC CTGGCCGCTGAACAAGATTTCGAATTAGAAGGCATGGACGTAGATGCGGC GTATTTGAACACCCCGGTTGAAGAAGAACTGTTCGTTAAGCTACCGCCCC AGTTTTCACCTTCCTCCCGAGACATACCGTTTTTGCGTCGCCTGCGTAAA ATCCTGTGTGGCCTCAAGCAGAACGGGCGTAACTGGAATAACACCCTTGA CGATTTTCTTGCTGGGATAGGACTCGACCGTTCCACTACCGACTCATGCT TGTACTTTTCTCGCGACGATGGGGGAGAGACAGACCTTCTGGTGGCTATC TATGTTGACGACATAGCGATTGCTGGCTGTCGTAAGAAAGTAGACGAGTT CAACCATAACATAAGTCAGCGTTTTAGGATGAAAGACTTGGGCTCTCTCT GGCGTGTGTTGGGAATAGAAGTACGATGTGACCGCCCTAATGGTACCATA ACTATCTCGCAGGTTAGTTACATCCGCGAGATATTAAAAATATCCAGTTT TGACGAGTGTCGAGCGGTACCTATCCCTGTAGAGGGAAGATTCCGGCACC CGAGTCGGCCGACAAGCCCTCCGAACCGGAGTCACTTGGGTCTGTACTGT CGGACATAGGCGCAGGAGTACAAGAAAGCAGCAGAGGGAGAAGTGCAAAT TTAACTGAATACAGAGGCATGGTAGGATGACTCATGTATGCCTCAACAAG AACTCGACCTGATATAGCATACGCGGTGCACCAAGCAGCACGTCGTACGA AGGACCCATCTCGAGACGATTTCAGTACAAGCAAGCACATTTTTCGCTAT CTCAGTGGTGTGCCTGACCTCGGCATTACGTTCGGCAGTAAGAGCAATGG TCACGGTCTTGAAGGATTCGTGATGCCGGTTGGGCGGAAGACGTTGAGGA CCAAAAGTCCACAACAGGATACGTATTCAAGCTAAACGGTGGCGCAATAA GTTGGTGCCCTAGGAAGCAACAGTTAGTTACGTGGTCCAGTTTAGAGGCC GAGTACGTTGCTGAAGGAGAAGCGGGAAAGGAGGTGGTATACCTTAGAGA GTTACCAGGATCGATAGGTTTCTGATGCAGGAGGAGCACGATAATATTTG AGGACAACAAATCAGCTATTGATCTCAGTAAGGGATCTGGCGCACACTGC AGGACAAAGCATGTCAGAGTGCGCTGGTACGAAATTCGAGAGTGGATTCG GGAAGGAATAGTGGCGTGGAAATACATGCAGACTGGCGACCAACTCGCTG ACATTTCAATGAAAGGACTGAGCAGA
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Coding sequence (CDS) from alignment at H-paniculata_contig18094:3735..5160-

>mRNA_H-paniculata_contig18094.4374.1 ID=mRNA_H-paniculata_contig18094.4374.1|Name=mRNA_H-paniculata_contig18094.4374.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1662bp|location=Sequence derived from alignment at H-paniculata_contig18094:3735..5160- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGACGTTACGTGCTTCTTTTAGCCTGGCCGCTGAACAAGATTTCGA
ATTAGAAGGCATGGACGTAGATGCGGCGTATTTGAACACCCCGGTTGAAG
AAGAACTGTTCGTTAAGCTACCGCCCCAGTTTTCACCTTCCTCCCGAGAC
ATACCGTTTTTGCGTCGCCTGCGTAAAATCCTGTGTGGCCTCAAGCAGAA
CGGGCGTAACTGGAATAACACCCTTGACGATTTTCTTGCTGGGATAGGAC
TCGACCGTTCCACTACCGACTCATGCTTGTACTTTTCTCGCGACGATGGG
GGAGAGACAGACCTTCTGGTGGCTATCTATGTTGACGACATAGCGATTGC
TGGCTGTCGTAAGAAAGTAGACGAGTTCAACCATAACATAAGTCAGCGTT
TTAGGATGAAAGACTTGGGCTCTCTCTGGCGTGTGTTGGGAATAGAAGTA
CGATGTGACCGCCCTAATGGTACCATAACTATCTCGCAGGTTAGTTACAT
CCGCGAGATATTAAAAATATCCAGTTTTGACGAGTGTCGAGCGGTACCTA
TCCCTGTAGAGGGAAGATTCCGGCACCCGAGTCGGCCGACAAGCCCTCCG
AACCGGAGTCACTTGGGTCTATGTCGACGTTACGTGCTTCTTTTAGCCTG
GCCGCTGAACAAGATTTCGAATTAGAAGGCATGGACGTAGATGCGGCGTA
TTTGAACACCCCGGTTGAAGAAGAACTGTTCGTTAAGCTACCGCCCCAGT
TTTCACCTTCCTCCCGAGACATACCGTTTTTGCGTCGCCTGCGTAAAATC
CTGTGTGGCCTCAAGCAGAACGGGCGTAACTGGAATAACACCCTTGACGA
TTTTCTTGCTGGGATAGGACTCGACCGTTCCACTACCGACTCATGCTTGT
ACTTTTCTCGCGACGATGGGGGAGAGACAGACCTTCTGGTGGCTATCTAT
GTTGACGACATAGCGATTGCTGGCTGTCGTAAGAAAGTAGACGAGTTCAA
CCATAACATAAGTCAGCGTTTTAGGATGAAAGACTTGGGCTCTCTCTGGC
GTGTGTTGGGAATAGAAGTACGATGTGACCGCCCTAATGGTACCATAACT
ATCTCGCAGGTTAGTTACATCCGCGAGATATTAAAAATATCCAGTTTTGA
CGAGTGTCGAGCGGTACCTATCCCTGTAGAGGGAAGATTCCGGCACCCGA
GTCGGCCGACAAGCCCTCCGAACCGGAGTCACTTGGGTCTGATTCGTGAT
GCCGGTTGGGCGGAAGACGTTGAGGACCAAAAGTCCACAACAGGATACGT
ATTCAAGCTAAACGGTGGCGCAATAAGTTGGTGCCCTAGGAAGCAACAGT
TAGTTACGTGGTCCAGTTTAGAGGCCGAGTACGTTGCTGAAGGAGAAGCG
GGAAAGGAGGTGGTATACCTTAGAGAGTTACCAGGATCGATAGGTTTCTG
AGATTCGTGATGCCGGTTGGGCGGAAGACGTTGAGGACCAAAAGTCCACA
ACAGGATACGTATTCAAGCTAAACGGTGGCGCAATAAGTTGGTGCCCTAG
GAAGCAACAGTTAGTTACGTGGTCCAGTTTAGAGGCCGAGTACGTTGCTG
AAGGAGAAGCGGGAAAGGAGGTGGTATACCTTAGAGAGTTACCAGGATCG
ATAGGTTTCTGA
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