prot_H-paniculata_contig18085.4369.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig18085.4369.1
Unique Name	prot_H-paniculata_contig18085.4369.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	108

Homology

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BLAST of mRNA_H-paniculata_contig18085.4369.1 vs. uniprot
Match: A0A6H5KP16_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP16_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 4.080e-56
Identity = 88/107 (82.24%), Postives = 93/107 (86.92%), Query Frame = 0

Query:    1 MFPSLAPVAQQVLGNQASASQVERDFSGCGNLLVPNRSRIDTYWVEMVMFLYVNFKHIPALKDIPMIAAKDIRACLPARFTGGDADLAAAEAAFDVVNNTANSDIGL 107
            MFP LAPVAQQVLGNQA A+QVERDFS C NLL  NRSRIDTYWVEMVMFL+VN+K IPA KDIPMIAAKDIR CLP RF GGDADLAAAEAAFDV+ N  NSDIG+
Sbjct:    1 MFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGGDADLAAAEAAFDVIENINNSDIGV 107

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BLAST of mRNA_H-paniculata_contig18085.4369.1 vs. uniprot
Match: A0A6H5JVT2_9PHAE (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT2_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 1.870e-55
Identity = 89/107 (83.18%), Postives = 94/107 (87.85%), Query Frame = 0

Query:    1 MFPSLAPVAQQVLGNQASASQVERDFSGCGNLLVPNRSRIDTYWVEMVMFLYVNFKHIPALKDIPMIAAKDIRACLPARFTGGDADLAAAEAAFDVVNNTANSDIGL 107
            MFP LAPVAQQVLGNQA A+QVERDFS C NLL  NRSRIDTYWVEMVMFL+VN+K IPA KDIPMIAAKDIR CLP RF GGDADLAAAEAAFDV+ NT NSDIG+
Sbjct:  116 MFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGGDADLAAAEAAFDVIENTNNSDIGV 222

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BLAST of mRNA_H-paniculata_contig18085.4369.1 vs. uniprot
Match: A0A6H5KSA7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA7_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 4.630e-52
Identity = 82/106 (77.36%), Postives = 88/106 (83.02%), Query Frame = 0

Query:    2 FPSLAPVAQQVLGNQASASQVERDFSGCGNLLVPNRSRIDTYWVEMVMFLYVNFKHIPALKDIPMIAAKDIRACLPARFTGGDADLAAAEAAFDVVNNTANSDIGL 107
            FP LAPVAQQV GNQA A+QVERDFSGC NLL  NRSR+DTYWVEMVMFL+ NF+HIP  KDIPMIAAKDI  CLP RF GGDADLAAAEAAFDV+ NT   D+ L
Sbjct:   42 FPYLAPVAQQVFGNQAGAAQVERDFSGCANLLTRNRSRMDTYWVEMVMFLHANFEHIPGFKDIPMIAAKDIHTCLPPRFNGGDADLAAAEAAFDVIKNTEIGDVDL 147

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BLAST of mRNA_H-paniculata_contig18085.4369.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 3.600e-51
Identity = 88/107 (82.24%), Postives = 93/107 (86.92%), Query Frame = 0

Query:    1 MFPSLAPVAQQVLGNQASASQVERDFSGCGNLLVPNRSRIDTYWVEMVMFLYVNFKHIPALKDIPMIAAKDIRACLPARFTGGDADLAAAEAAFDVVNNTANSDIGL 107
            MFP LAPVAQQVLGNQA A+QVERDFS C NLL  NRSRIDTYWVEMVMFL+VN+K IPA KDIPMIAAKDIR CLP RF GGDADLAAAEA FDV+ NT NSDIG+
Sbjct:  514 MFPCLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGGDADLAAAEATFDVIENTNNSDIGV 620

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BLAST of mRNA_H-paniculata_contig18085.4369.1 vs. uniprot
Match: A0A6H5KBM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM2_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 6.920e-48
Identity = 82/106 (77.36%), Postives = 89/106 (83.96%), Query Frame = 0

Query:    2 FPSLAPVAQQVLGNQASASQVERDFSGCGNLLVPNRSRIDTYWVEMVMFLYVNFKHIPALKDIPMIAAKDIRACLPARFTGGDADLAAAEAAFDVVNNTANSDIGL 107
            F +L   A +VLGNQA A+QVERDFS C NLL  NRSRIDTYWVEMVMFL+VN+K IPA KDIPMIAAKDIR CLP RF GGDADLAAAEAAFDV+ NT NSDIG+
Sbjct:  218 FQALYMTAGEVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKCIPAFKDIPMIAAKDIRTCLPPRFNGGDADLAAAEAAFDVIENTNNSDIGV 323

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BLAST of mRNA_H-paniculata_contig18085.4369.1 vs. uniprot
Match: A0A6H5JZQ5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ5_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 2.100e-44
Identity = 77/101 (76.24%), Postives = 85/101 (84.16%), Query Frame = 0

Query:    1 MFPSLAPVAQQVLGNQASASQVERDFSGCGNLLVPNRSRIDTYWVEMVMFLYVNFKHIPALKDIPMIAAKDIRACLPARFTGGDADLAAAEAAFDVVNNTA 101
            +FP LAPVAQQV GNQA+ SQVERDFSG G LL PNRSR+DTYWVE+VMFL  NF HIP LK IPM+AAK+IR+CLPARF G DADL AAEA FDV+ NTA
Sbjct:  203 IFPHLAPVAQQVFGNQAAVSQVERDFSGVGILLAPNRSRMDTYWVEIVMFLNANFAHIPPLKQIPMVAAKNIRSCLPARFHGRDADLMAAEAIFDVLMNTA 303

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BLAST of mRNA_H-paniculata_contig18085.4369.1 vs. uniprot
Match: A0A6H5JN28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN28_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 2.830e-39
Identity = 66/86 (76.74%), Postives = 71/86 (82.56%), Query Frame = 0

Query:   22 VERDFSGCGNLLVPNRSRIDTYWVEMVMFLYVNFKHIPALKDIPMIAAKDIRACLPARFTGGDADLAAAEAAFDVVNNTANSDIGL 107
            VERDFSGC NLL  NRSR+DTYWVEMVMFL+ NF+HIP  KDIPMIAAKDI  CLP RF  GDADLAAAEAAFDV+ NT   D+GL
Sbjct:  135 VERDFSGCANLLTRNRSRMDTYWVEMVMFLHANFEHIPGFKDIPMIAAKDIHTCLPPRFNRGDADLAAAEAAFDVIENTETGDVGL 220

[Close]

BLAST of mRNA_H-paniculata_contig18085.4369.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 1.780e-31
Identity = 62/98 (63.27%), Postives = 72/98 (73.47%), Query Frame = 0

Query:    2 FPSLAPVAQQVLGNQASASQVERDFSGCGNLLVPNRSRIDTYWVEMVMFLYVNFKHIPALKDIPMIAAKDIRACLPARFTGGDADLAAAEAAFDVVNN 99
            FP+L  VAQQ  G+Q SA+ VERDFSGCG  LVPNRSR++ YWVEMVMFL  NFK IP   +IP I +KDIR CLPA+F G D DL +AE A D + N
Sbjct:  744 FPALKHVAQQTFGSQPSAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFLNANFKFIPKYDNIPSIDSKDIRKCLPAKFKGTDEDLLSAEMALDPLRN 841

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BLAST of mRNA_H-paniculata_contig18085.4369.1 vs. uniprot
Match: A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 1.080e-27
Identity = 61/100 (61.00%), Postives = 69/100 (69.00%), Query Frame = 0

Query:    2 FPSLAPVAQQVLGNQASASQVERDFSGCGNLLVPNRSRIDTYWVEMVMFLYVNFKHIPALKDIPMIAAKDIRACLPARFTGGDADLAAAEAAFDVVNNTA 101
            FPSL  VAQQ  GNQASA+ VERDFSGCG  +VPNRSR+D YWVEMVMFL  NF     + +IP I  KDIR CLPA+F G D D   AE A   ++N A
Sbjct:  402 FPSLKHVAQQTFGNQASAAPVERDFSGCGLFMVPNRSRVDEYWVEMVMFLKANFNSSRRI-NIPQIDPKDIRKCLPAKFEGTDEDHLNAEMALYPLSNDA 500

[Close]

BLAST of mRNA_H-paniculata_contig18085.4369.1 vs. uniprot
Match: A0A6H5JB56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB56_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 2.080e-27
Identity = 53/78 (67.95%), Postives = 66/78 (84.62%), Query Frame = 0

Query:   19 ASQVERDFSGCGNLLVPNRSRIDTYWVEMVMFLYVNFKHIPALKDIPMIAAKDIRACLPARFTGGDADLAAAEAAFDV 96
            A +VERDFS C +LL  +RSR+DTYWVEM+MFL+ NFKH+P  K+IP+I +K+IR  LPARFTG DA+LAAAEAAFD+
Sbjct: 1198 AEEVERDFSKCADLLTRHRSRVDTYWVEMIMFLHANFKHVPDFKEIPVIESKNIRKALPARFTGVDAELAAAEAAFDM 1275

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig18085.4369.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig18085.4369.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16


Match Name	E-value	Identity	Description
A0A6H5KP16_9PHAE	4.080e-56	82.24	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JVT2_9PHAE	1.870e-55	83.18	Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ec...	[more]
A0A6H5KSA7_9PHAE	4.630e-52	77.36	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KZ46_9PHAE	3.600e-51	82.24	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KBM2_9PHAE	6.920e-48	77.36	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JZQ5_9PHAE	2.100e-44	76.24	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JN28_9PHAE	2.830e-39	76.74	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JJJ9_9PHAE	1.780e-31	63.27	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5K8W6_9PHAE	1.080e-27	61.00	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JB56_9PHAE	2.080e-27	67.95	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 2..52 e-value: 1.3E-5 score: 24.9
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 20..107
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..19
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..19
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 2..57

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig18085	contig	H-paniculata_contig18085:1886..2209 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig18085.4369.1	mRNA_H-paniculata_contig18085.4369.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig18085 1141..2280 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig18085.4369.1 ID=prot_H-paniculata_contig18085.4369.1|Name=mRNA_H-paniculata_contig18085.4369.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=108bp
MFPSLAPVAQQVLGNQASASQVERDFSGCGNLLVPNRSRIDTYWVEMVMF
LYVNFKHIPALKDIPMIAAKDIRACLPARFTGGDADLAAAEAAFDVVNNT
ANSDIGL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008906	HATC_C_dom
IPR012337	RNaseH-like_sf