mRNA_H-paniculata_contig18081.4368.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig18081.4368.1
Unique NamemRNA_H-paniculata_contig18081.4368.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig18081.4368.1 vs. uniprot
Match: D8LPZ6_ECTSI (CBF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ6_ECTSI)

HSP 1 Score: 266 bits (681), Expect = 2.290e-79
Identity = 144/192 (75.00%), Postives = 156/192 (81.25%), Query Frame = 1 
Query:    1 FLTKVLRGGTLSDKVAALTLQVQESPVHRLSVLDGLLELGLKKERRTAQMALEALKDLFITNLLPDGRRLVPFESRPLRQLTAANTRXXXXXXXXXXXXXAREMKG--------AGKALLMWYFEDQIRSRFYRVVAAIEAGSRDTVENFKRFSLEAAKDLLEAKPEGEGRLLGLLVNKLGDPDRKISSKVF 552
            ++ +VLRGGTLSDKVAALTLQVQESPVHRL+VLDGLL+LGLKKERRTAQMALEALKDLFITNLLPD R+LVPFE+RPL Q  A+ T                  +G        AGKALLMWY+EDQI +RFYR+V AIEAGSRDTVENFKRFSLEAAKDLLEAKPEGEGRLL LLVNKLGDPDRKISSKV 
Sbjct:  263 WVAQVLRGGTLSDKVAALTLQVQESPVHRLAVLDGLLDLGLKKERRTAQMALEALKDLFITNLLPDSRKLVPFETRPLLQALASVTEEGNKGQGGGGDSVPGGGRGVNSPGGKAAGKALLMWYYEDQILNRFYRLVGAIEAGSRDTVENFKRFSLEAAKDLLEAKPEGEGRLLALLVNKLGDPDRKISSKVI 454
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BLAST of mRNA_H-paniculata_contig18081.4368.1 vs. uniprot
Match: A0A6H5L5C9_9PHAE (Reverse transcriptase domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5C9_9PHAE)

HSP 1 Score: 242 bits (618), Expect = 9.090e-71
Identity = 138/188 (73.40%), Postives = 144/188 (76.60%), Query Frame = 1 
Query:    7 TKVLRGGTLSDKVAALTLQVQESPVHRLSVLDGLLELGLKKERRTAQMALEALKDLFITNLLPDGRRLVPFESRPLRQLTAANTRXXXXXXXXXXXXXAREMKG--------AGKALLMWYFEDQIRSRFYRVVAAIEAGSRDTVENFKRFSLEAAKDLLEAKPEGEGRLLGLLVNKLGDPDRKISSK 546
            T VLRGGTLSDKVAALTLQVQESPVHRL+VLDGLL+LGLKKERRTAQMALEALKDLFITNLLPD R+LVPFESRPL Q  A+ T                  +G        AGKALLMW         F R+V AIEAGSRDTVENFKRFSLEAAKDLLEAKPEGEGRLL LLVNKLGDPDRKISSK
Sbjct:   54 TWVLRGGTLSDKVAALTLQVQESPVHRLAVLDGLLDLGLKKERRTAQMALEALKDLFITNLLPDSRKLVPFESRPLLQALASVTEEGNKGQGGGGESVPEGGRGVNGPRGKAAGKALLMW---------FSRLVGAIEAGSRDTVENFKRFSLEAAKDLLEAKPEGEGRLLALLVNKLGDPDRKISSK 232
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BLAST of mRNA_H-paniculata_contig18081.4368.1 vs. uniprot
Match: A0A835ZC94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC94_9STRA)

HSP 1 Score: 174 bits (440), Expect = 7.870e-47
Identity = 100/207 (48.31%), Postives = 131/207 (63.29%), Query Frame = 1 
Query:    1 FLTKVLRGGTLSDKVAALTLQVQESPVHRLSVLDGLLELGLKKERRTAQMALEALKDLFITNLLPDGRRLVPFESRPLRQLT--AANTRXXXXXXXXXXXXXAREMKGAGKALLMWYFEDQIRSRFYRVV-----------------------AAIEAGSRDTVENFKRFSLEAAKDLLEAKPEGEGRLLGLLVNKLGDPDRKISSK 546
            +L++VL+ GTLSDK++ALT++ +ESPVHRL+ LD L+EL  K +RRTAQMA EALKDLFI++LLPD RRLVPF  RPL Q    A N +                 + A K LLMWYFE ++  R+  +V                       AA+ A ++D+V N KR  +EAA+DLLEAKP GE +LL +LVNK GDPDRK+++K
Sbjct:  235 YLSQVLKSGTLSDKISALTMRCKESPVHRLADLDKLVELATKHDRRTAQMAQEALKDLFISDLLPDERRLVPFRERPLLQFEEWAPNFK-----------------EQAAKTLLMWYFEGELLRRYGALVTALDAATKVRRYLSVLRLGGGWVAALHAATKDSVSNTKRSGMEAARDLLEAKPTGEAQLLAILVNKFGDPDRKVANK 424
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BLAST of mRNA_H-paniculata_contig18081.4368.1 vs. uniprot
Match: A0A7S2GVG6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GVG6_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.130e-37
Identity = 79/186 (42.47%), Postives = 113/186 (60.75%), Query Frame = 1 
Query:    1 FLTKVLRGGTLSDKVAALTLQVQESPVHRLSVLDGLLELGLKKERRTAQMALEALKDLFITNLLPDGRRLVPFESRPLRQLTAANTRXXXXXXXXXXXXXAREMKGAGKALLMWYFEDQIRSRFYRVVAAIEAGSRDTVENFKRFSLEAAKDLLEAKPEGEGRLLGLLVNKLGDPDRKISSKVFIE 558
            F+ ++LR GTL+D++AA+TL+VQ+SP+H LS LDGLL+LG K   R +++A EAL DLF  NLLP  R+L+  ESRPL    A                   E K      LMW FE ++++RF   +  +    +D+  + +R  L+ A DLL  + E EG L+ L+VNKLGDPDRKI+S+  ++
Sbjct:   71 FMDQMLRSGTLADRIAAMTLRVQQSPLHELSSLDGLLKLGQKGNHRGSRLAFEALCDLFKENLLPADRQLIALESRPLLSSEATE-----------------EHK------LMWGFEAELKARFSLFLDQLSLALKDSTTDLRRIGLDCAADLLTHRSEQEGTLMSLVVNKLGDPDRKIASRAVLK 233
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BLAST of mRNA_H-paniculata_contig18081.4368.1 vs. uniprot
Match: A0A1S3HR38_LINUN (CCAAT/enhancer-binding protein zeta-like n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HR38_LINUN)

HSP 1 Score: 141 bits (355), Expect = 1.950e-35
Identity = 82/178 (46.07%), Postives = 113/178 (63.48%), Query Frame = 1 
Query:   13 VLRGGTLSDKVAALTLQVQESPVHRLSVLDGLLELGLKKERRTAQMALEALKDLFITNLLPDGRRLVPFESRPLRQLTAANTRXXXXXXXXXXXXXAREMKGAGKALLMWYFEDQIRSRFYRVVAAIEAGSRDTVENFKRFSLEAAKDLLEAKPEGEGRLLGLLVNKLGDPDRKISSK 546
            V+  GTL+DK+AALT+Q+Q+SPVH L  LD L+ +  KK +R   +A++ L++LFI++LLPD R+L PFE  PL QL +  +              AR+     K L+MWYFE Q++SR+  VV A+E    DT+   K+ +L    +LL  KPE E  LL LLVNKLGDPD KI++K
Sbjct:  222 VVSSGTLADKMAALTIQIQDSPVHTLQSLDLLINMAKKKGKRECMLAVDTLRELFISDLLPD-RKLKPFEQHPLSQLASLTS----------GNKDARD-----KRLVMWYFEAQLKSRYETVVKALEHIGHDTIPVTKKKALSTVFELLVNKPEQEKALLCLLVNKLGDPDYKIAAK 383
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BLAST of mRNA_H-paniculata_contig18081.4368.1 vs. uniprot
Match: A0A8K1FJ91_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJ91_PYTOL)

HSP 1 Score: 140 bits (354), Expect = 2.650e-35
Identity = 77/183 (42.08%), Postives = 110/183 (60.11%), Query Frame = 1 
Query:    1 FLTKVLRGGTLSDKVAALTLQVQESPVHRLSVLDGLLELGLKKERRTAQMALEALKDLFITNLLPDGRRLVPFESRPLRQLTAANTRXXXXXXXXXXXXXAREMKGAGKALLMWYFEDQIRSRFYRVVAAIEAGSRDTVENFKRFSLEAAKDLLEAKPEGEGRLLGLLVNKLGDPDRKISSKV 549
            +L+ +++ GTL+D+VAALTL +Q SP H LS L  L+ +  KK RR + MA+E+LKDLFI NLLPD R+L  F   PL      +                       + L++W++E  +++ F ++V  + +G  D V+N KR  + AA  LL AKPE E  LLG+LVNK+GDPDRKI+S +
Sbjct:  163 YLSTMMQKGTLADRVAALTLTIQSSPFHTLSRLSQLITMASKKARRESMMAVESLKDLFINNLLPDDRKLNFFHQNPLDHPDVTD-----------------------EHLVVWFYEHCLKTAFAQLVGVLSSGMNDAVDNHKRACIRAANALLAAKPEQEAVLLGMLVNKIGDPDRKIASYI 322
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BLAST of mRNA_H-paniculata_contig18081.4368.1 vs. uniprot
Match: A0A699Z0I8_HAELA (CBF domain-containing protein (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699Z0I8_HAELA)

HSP 1 Score: 136 bits (342), Expect = 6.300e-35
Identity = 86/184 (46.74%), Postives = 109/184 (59.24%), Query Frame = 1 
Query:    1 FLTKVLRGGTLSDKVAALTLQVQESPVHRLSVLDGLLELGLKKE--RRTAQMALEALKDLFITNLLPDGRRLVPFESRPLRQLTAANTRXXXXXXXXXXXXXAREMKGAGKALLMWYFEDQIRSRFYRVVAAIEAGSRDTVENFKRFSLEAAKDLLEAKPEGEGRLLGLLVNKLGDPDRKISSK 546
            +L +V R GT +DKVAA+TLQVQES V  L+ LD LL    +++  R   + ALEAL++LF+T LLPDGRRL   ES+PL  L +                     K   K LL W+ EDQI+ R+   V A+E  SRD +E  K  + +A   LL  KPE E RLLG LVNKLGDP RK++SK
Sbjct:  144 WLQQVKRQGTTADKVAAITLQVQESAVANLAGLDMLLGWVTRRQGGREVVRQALEALQELFLTVLLPDGRRLKHLESQPLASLPSG--------------------KEGAKYLLWWFLEDQIKVRYGLFVGALEECSRDNLEFLKDKATKALYTLLVKKPEAEARLLGALVNKLGDPARKLASK 307
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BLAST of mRNA_H-paniculata_contig18081.4368.1 vs. uniprot
Match: A0A699YNK8_HAELA (CBF domain-containing protein (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699YNK8_HAELA)

HSP 1 Score: 136 bits (342), Expect = 6.620e-35
Identity = 86/184 (46.74%), Postives = 109/184 (59.24%), Query Frame = 1 
Query:    1 FLTKVLRGGTLSDKVAALTLQVQESPVHRLSVLDGLLELGLKKE--RRTAQMALEALKDLFITNLLPDGRRLVPFESRPLRQLTAANTRXXXXXXXXXXXXXAREMKGAGKALLMWYFEDQIRSRFYRVVAAIEAGSRDTVENFKRFSLEAAKDLLEAKPEGEGRLLGLLVNKLGDPDRKISSK 546
            +L +V R GT +DKVAA+TLQVQES V  L+ LD LL    +++  R   + ALEAL++LF+T LLPDGRRL   ES+PL  L +                     K   K LL W+ EDQI+ R+   V A+E  SRD +E  K  + +A   LL  KPE E RLLG LVNKLGDP RK++SK
Sbjct:  156 WLQQVKRQGTTADKVAAITLQVQESAVANLAGLDMLLGWVTRRQGGREVVRQALEALQELFLTVLLPDGRRLKHLESQPLASLPSG--------------------KEGAKYLLWWFLEDQIKVRYGLFVGALEECSRDNLEFLKDKATKALYTLLVKKPEAEARLLGALVNKLGDPARKLASK 319
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BLAST of mRNA_H-paniculata_contig18081.4368.1 vs. uniprot
Match: A0A662Y153_9STRA (CBF domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y153_9STRA)

HSP 1 Score: 139 bits (349), Expect = 1.220e-34
Identity = 76/181 (41.99%), Postives = 110/181 (60.77%), Query Frame = 1 
Query:    1 FLTKVLRGGTLSDKVAALTLQVQESPVHRLSVLDGLLELGLKKERRTAQMALEALKDLFITNLLPDGRRLVPFESRPLRQLTAANTRXXXXXXXXXXXXXAREMKGAGKALLMWYFEDQIRSRFYRVVAAIEAGSRDTVENFKRFSLEAAKDLLEAKPEGEGRLLGLLVNKLGDPDRKISS 543
            +L  +++ GTL+D+VAALTL  Q SP+H L  +  L+ +  KK RR + MA+++LKDLF+ +LLPD R+L  F   PL+Q  A+                          L++W+FE  +++ + ++ A + AG  D V++ KR  L AA  LL AKPE EG LLG+LVNKLGDPDRKI++
Sbjct:  137 YLATMMKSGTLADRVAALTLTAQASPLHSLLRVGQLITMASKKARRESLMAVDSLKDLFLNSLLPDDRKLRFFHQHPLQQAQASQAH-----------------------LVLWFFEHCLKTAYAQLTAVLAAGMDDAVDSHKRACLRAASALLRAKPEQEGVLLGMLVNKLGDPDRKIAA 294
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BLAST of mRNA_H-paniculata_contig18081.4368.1 vs. uniprot
Match: L1J384_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J384_GUITC)

HSP 1 Score: 132 bits (331), Expect = 3.370e-34
Identity = 76/183 (41.53%), Postives = 106/183 (57.92%), Query Frame = 1 
Query:    4 LTKVLRGGTLSDKVAALTLQVQESPVHRLSVLDGLLELGLKKERRTAQMALEALKDLFITNLLPDGRRLVPFESRPLRQLTAANTRXXXXXXXXXXXXXAREMKGAGKALLMWYFEDQIRSRFYRVVAAIEAGSRDTVENFKRFSLEAAKDLLEAKPEGEGRLLGLLVNKLGDPDRKISSKVF 552
            L KV+  GTL+DK+A++ L +Q+SPVHRL VLD LL++  K+ +R   MALE LKDLF T+LLPD R+L  F  +P+ +  A N                         L+MWYFED ++ +F   +  +EA + D++ + +      + DLL  K E E   L LLVNKLGDPD+K+SS V 
Sbjct:    1 LKKVMSSGTLNDKMASMMLMIQQSPVHRLQVLDILLKMASKRGKREHSMALETLKDLFETDLLPD-RKLTYFHEQPVDEQAARNP----------------------TLLVMWYFEDAVKHKFAEFITHLEAATHDSLTHVRTKVCRMSYDLLRTKAEQEQANLFLLVNKLGDPDKKVSSHVM 160
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18081.4368.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPZ6_ECTSI2.290e-7975.00CBF domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L5C9_9PHAE9.090e-7173.40Reverse transcriptase domain-containing protein n=... [more]
A0A835ZC94_9STRA7.870e-4748.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2GVG6_9STRA1.130e-3742.47Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A1S3HR38_LINUN1.950e-3546.07CCAAT/enhancer-binding protein zeta-like n=2 Tax=L... [more]
A0A8K1FJ91_PYTOL2.650e-3542.08Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A699Z0I8_HAELA6.300e-3546.74CBF domain-containing protein (Fragment) n=1 Tax=H... [more]
A0A699YNK8_HAELA6.620e-3546.74CBF domain-containing protein (Fragment) n=1 Tax=H... [more]
A0A662Y153_9STRA1.220e-3441.99CBF domain-containing protein (Fragment) n=1 Tax=N... [more]
L1J384_GUITC3.370e-3441.53Uncharacterized protein (Fragment) n=1 Tax=Guillar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18081contigH-paniculata_contig18081:1168..5160 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score265.4
Seed ortholog evalue2e-68
Seed eggNOG ortholog2880.D8LPZ6
Preferred nameCEBPZ
KEGG koko:K14572,ko:K14832
KEGG Pathwayko03008,map03008
Hectar predicted targeting categoryother localisation
GOsGO:0000027,GO:0000976,GO:0000977,GO:0000978,GO:0000981,GO:0000982,GO:0000987,GO:0001012,GO:0001067,GO:0001077,GO:0001228,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0003723,GO:0003729,GO:0003824,GO:0005488,GO:0005509,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005911,GO:0006139,GO:0006351,GO:0006355,GO:0006357,GO:0006364,GO:0006366,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009506,GO:0009507,GO:0009526,GO:0009536,GO:0009553,GO:0009889,GO:0009891,GO:0009893,GO:0009941,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022607,GO:0022613,GO:0022618,GO:0030054,GO:0030684,GO:0030686,GO:0030687,GO:0030689,GO:0030690,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0032774,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0040008,GO:0042254,GO:0042255,GO:0042273,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043565,GO:0043933,GO:0044085,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046872,GO:0048229,GO:0048518,GO:0048522,GO:0048638,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0055044,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:1990904,GO:2000112,GO:2001141
EggNOG free text desc.ATPase activity
EggNOG OGsCOG5271@1,COG5593@1,KOG1808@2759,KOG2038@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009
Exons4
Model size561
Cds size561
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18081.4368.1prot_H-paniculata_contig18081.4368.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig18081 1168..5160 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929407.6913822-CDS-H-paniculata_contig18081:1167..13081622929407.6913822-CDS-H-paniculata_contig18081:1167..1308Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18081 1168..1308 +
1691480848.1099467-CDS-H-paniculata_contig18081:1167..13081691480848.1099467-CDS-H-paniculata_contig18081:1167..1308Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18081 1168..1308 +
1622929407.710306-CDS-H-paniculata_contig18081:2462..26781622929407.710306-CDS-H-paniculata_contig18081:2462..2678Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18081 2463..2678 +
1691480848.1258667-CDS-H-paniculata_contig18081:2462..26781691480848.1258667-CDS-H-paniculata_contig18081:2462..2678Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18081 2463..2678 +
1622929407.7230117-CDS-H-paniculata_contig18081:2926..30221622929407.7230117-CDS-H-paniculata_contig18081:2926..3022Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18081 2927..3022 +
1691480848.1360683-CDS-H-paniculata_contig18081:2926..30221691480848.1360683-CDS-H-paniculata_contig18081:2926..3022Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18081 2927..3022 +
1622929407.7376816-CDS-H-paniculata_contig18081:5052..51601622929407.7376816-CDS-H-paniculata_contig18081:5052..5160Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18081 5053..5160 +
1691480848.1457028-CDS-H-paniculata_contig18081:5052..51601691480848.1457028-CDS-H-paniculata_contig18081:5052..5160Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18081 5053..5160 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig18081.4368.1

>prot_H-paniculata_contig18081.4368.1 ID=prot_H-paniculata_contig18081.4368.1|Name=mRNA_H-paniculata_contig18081.4368.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=187bp
FLTKVLRGGTLSDKVAALTLQVQESPVHRLSVLDGLLELGLKKERRTAQM
ALEALKDLFITNLLPDGRRLVPFESRPLRQLTAANTRRQQQLSSKEGGGG
AREMKGAGKALLMWYFEDQIRSRFYRVVAAIEAGSRDTVENFKRFSLEAA
KDLLEAKPEGEGRLLGLLVNKLGDPDRKISSKVFIE*
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mRNA from alignment at H-paniculata_contig18081:1168..5160+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig18081.4368.1 ID=mRNA_H-paniculata_contig18081.4368.1|Name=mRNA_H-paniculata_contig18081.4368.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3993bp|location=Sequence derived from alignment at H-paniculata_contig18081:1168..5160+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTCCTCACGAAGGTCTTGCGAGGCGGAACTCTGTCGGACAAGGTCGCGGC
GCTGACCCTACAGGTGCAAGAGAGTCCTGTGCACCGTCTCAGTGTACTCG
ATGGGCTGCTGGAACTCGGGCTGAAGAAAGAGCGGCGCACGGTGAGGAGA
TAAAAACAAAGGACAAGATGATCCATTGTGTCTTTTTTCTTTGCTTGTAT
CACGTCAGTTGTACTTATTCATTGTATTGGACTATTTGGCGGATAAGGCA
AAGATTACGCCACTGGTGGAGACCATGTCGACGGTTATGAGATGGCGCTA
TTTGTGCGTTTAACTCGCGCACACGGACTCGCTGCGCTCTCGCCGTGAAT
CGCCCCACGCTCGTACATAAACACAATTTGATATTCTCATTTCGCAAAAA
AAAAAGAAAAAAAAAGCGGCGGATGGTGGTGGGTGAGAGAAAAAAATGTT
TGCCCGAAATGTATTCCTTTTTGGAATTTTTGATTCGGTCGTACGTGCAT
AGCTAGCAGTGAGCTGCTCTTCACAGGCCCCTTTTGGACGCCAACTTTGC
TTACCCTCACCAACATCTCGTTACGAAAGGTAATTGTTTTCTGGAATTCG
GATGTTGCGTGAGAGATACGAATAATCACTGGTTGTGAGACAAATTGTTT
GTTTTGTAACGAGACGTTAGTGCAGGTGGACAGGGATCCATCCGGGATGA
GGAGCTTCTTCTTGGCTGTACACGCGACGATATCGGAATTTGTAGAAGGG
ATTATTTTGACTCAAACACTCTCAAGAAAAACACATGAAGAGAGAACTTG
TCCTTATGATGTTGAGTATTATACACGGCGGCACTTGGAAACATATGTGT
GTTTTCGTGAGCTTCACGGCTTATTGATCAATTTAACCTCCCCTCCCCCC
CCCCCCCCCCCAAGCCCCCAAGCCCCGAAGCCTCCACCCCCCCAAAAAAG
AAATTCTTGTCATTTTTACTAGTTATGTAGGAATTAGTTCAGAGGGCATA
CTTTTGATGAGCAGTGTTTTTTGAGAGCATTTTTTTTTCAAGGACATGGT
GAAAATGTATATATATATCTATATATCTAACCCTAAGATTGTCGTGGCTG
GTCTACGAGGTGCAAGAGTTCCCTACACCCGGTCGTGATGGGGTTCAAAT
CCAAGGCCATTTGATTGGGATCCTCTCGGTTCACCAAGCAGCATGTACCC
AAATATTCGTCACGTCAGTTCATCTTGTGGGCGGGCATATATCCATGGTT
TCTCGTGGATGAGCTTGCTCCCCTTCCTCCTCCGATGGCATGCAGGCGCA
AATGGCGCTAGAAGCCCTGAAGGATCTGTTCATCACCAACCTCCTGCCGG
ACGGCAGAAGGCTTGTCCCGTTTGAGTCTAGACCACTTCGGCAACTTACG
GCCGCTAATACCCGCCGACAGCAGCAGTTATCATCCAAAGAGGGTGGAGG
CGGAGCAAGGGAGATGAAGGGTGCTGGAAAAGCGCTGCTAATGTGGTATT
TCGAGGACCAGGTACGTGGGAGGAGGAGGGGGGGGGGTTAGGGCGGTCGT
AAGTAGAACTGCAGTTGTCAAGCACATATAATAAATTCGTTGTACTCAAG
AGCGAGTCGAAAGTTGAAGCAGATAATTTACAGGATTTCCAAAAAATAAT
TGTAGTTTGAAATTTTGTCGTGCGTGAGTAAATTATATCCATATTTGTAT
GTTTTTTTCTTTTTTAAACAAATTAAATAAATTAACAAGCATGTTTTGGA
ACATGACAGATTCGATCGAGGTTCTACCGAGTGGTAGCGGCCATCGAGGC
GGGTTCCAGGGACACAGTGGAGAATTTTAAGAGGTTCTCGCTCGAAGCCG
CTAAGGTATGTTATATGCTTACATGATGAAGTTCAGTCACCCCCTAGTCC
GTCACAATGGTTGCGTGTATTCTGCTGATGTAATCGAGGTTTGCTGGGAA
ATCAGGCAATCAAGAGAGTTTGTTCTTATTGTTCGCCCATGCAAAACGTT
GTTTCCGTGATGCGGTGATGTAAAAGAATTAAAAAATCTGAAATCCGGCA
ATTTAGTGAAGCTCTGCGTAATCCGTTGAAGTCGAGAGACTTTGTAATCC
GCTAATATAAGACGTCCTCTGTGCAATTATGTGATGTCAAGAAGTTCTCT
CTGAAATCGGGCAAGTTCGGGAGGCTCTCTCTAGATCCGGTACGGACGTA
ACTTATGGGTGGAATCCGCTAGTGGCAACTGTTCTCTCTCGAAAATAATT
GACGTGTGATTTGAGAGGTTCACTCCCCCCGGATAAATGTGAATATTTGG
AAATGATTTTCACAAAAAAAGAAATTATTCTTCCGAGTTTTAGAATAAGC
TCGTGTATTTTTATATGCTCTGGATCAACCACGACTGCTAATAATGCTCG
TAAAACCGAATGGACAGGGGGTGGGAACTTTTATACCGTGTGTCCGTTAA
TCCTGAAACTCGAGCGAACACTTTCTCTTGTGTATGGAAAATCGTTTGCA
AGATTTCATTTGTGTTTTGTCCGGGGGGTGAAGAGGTTATTACTGAAATC
CGCTTATTGGAACACGTTATTACTAGAACTAGTTATAGTGTACAAGTTAG
GAGGAAGAGTGTCATGTATTATTCAAGAGGGATTGTGTGTTGCCCTGTGA
CGGAAATGAGTACTATCTGTATTCCGTCAGTTGCACAAGTTTTTTTTTTT
TTTTTTTAACCCCCGAAGGTTAAGGCAAAATCCTTTACCGATGCTTCCAT
ACCTAAGTATTTCTACCGAAGTATTTCTACATTTCCTTTTACAAAACAGA
GTTATTTATACCTCTGCGGGGTAGGCGGCACCCCGGTTCGGCCGAACCAG
GTTAGGCAGTGTGCGGGTTGCACCCACTAAAAAGACCTCTGACTAGACTT
CCAGCCATGCATGCTCAGTTCACGAGCTGTCCTACCCGTACTGGCGTAGG
TCGGTGGATGTAGGAGTTTTTCGAACAAAACTCAGCTTGTCTAGAGCAAC
CAGGATCTCTCTGGGATTCGTCCAAGGTCAGTTCTAGCAACCATGTTTTA
TCGCAGGAAATGATGAAGTCTAGAAATCCGGGAACTCCCACGCGGGAATT
TCAAGGAAAGAAATTCCAAGGAGGCAAATCAGCGAAAAATAATTTGTACG
AAATACAGTTATTGTCATCGAATCCACACCATCCTCAATGTAAGTTGACT
GACTACCAGTGCGAGAGAGCCACGGTGTGCGGTATGGCTATCATGGGACG
AGCGCTCGAGGATAAATGAAGGTGTCAAAATGGTTGGGCTATACCGGTGT
CTGCCTCGTGAAACTATGGAGACGTTGCATGTGCAGGAAGTGTCCAATCT
GTTGAGAGTGATAGCGTGGAGGTCATGATTTACGCCTCGAAATAAATGGT
CATTAGAACTGGCCCTCAAATGAATGAGGTACACGATCCGTTTGATGCGA
AAAAGTTTTCGGTGAGAGTTGACGGATGGATGGATGGATGGATGGATATA
TGTTGTTAGTATTGTTTACTGTTGCTATCGTTATAAACCACTATCGTTGT
TTCGTGATTCGACAGAAGATAAGCGAAATACTGGAGTTGATGTTTTTTTT
TTTTTCAACTAGAGAAATGTGTATATGTATATATGTACATTTATTACATA
GAGACAGCTACAAAATGGGTGTGTGTGTGTGTGTGTGTGTATTTTCTATC
GTCGTGAGCCATGATTGTATCTTTTTTGGGGGGGGAGCTGAAACCAAGAA
ATATTCCATAAGAAATATGTGTCTTTTTTTTTTTCATTATTTCTTTTTTT
CAGGATTTTGTTTTCAGTAACTTTTTTCTATTTTTGTTCCATATCTTGGT
AGATGATCTTTTTTTCGTTTCATGTTATGGTGCAGGATCTACTCGAGGCG
AAACCAGAAGGCGAAGGTCGCCTGCTCGGACTCCTGGTGAACAAACTCGG
TGACCCGGACCGAAAGATCAGCTCCAAGGTATTTATAGAATGA
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Coding sequence (CDS) from alignment at H-paniculata_contig18081:1168..5160+

>mRNA_H-paniculata_contig18081.4368.1 ID=mRNA_H-paniculata_contig18081.4368.1|Name=mRNA_H-paniculata_contig18081.4368.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1122bp|location=Sequence derived from alignment at H-paniculata_contig18081:1168..5160+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTCCTCACGAAGGTCTTGCGAGGCGGAACTCTGTCGGACAAGGTCGCGGC
GCTGACCCTACAGGTGCAAGAGAGTCCTGTGCACCGTCTCAGTGTACTCG
ATGGGCTGCTGGAACTCGGGCTGAAGAAAGAGCGGCGCACGTTCCTCACG
AAGGTCTTGCGAGGCGGAACTCTGTCGGACAAGGTCGCGGCGCTGACCCT
ACAGGTGCAAGAGAGTCCTGTGCACCGTCTCAGTGTACTCGATGGGCTGC
TGGAACTCGGGCTGAAGAAAGAGCGGCGCACGGCGCAAATGGCGCTAGAA
GCCCTGAAGGATCTGTTCATCACCAACCTCCTGCCGGACGGCAGAAGGCT
TGTCCCGTTTGAGTCTAGACCACTTCGGCAACTTACGGCCGCTAATACCC
GCCGACAGCAGCAGTTATCATCCAAAGAGGGTGGAGGCGGAGCAAGGGAG
ATGAAGGGTGCTGGAAAAGCGCTGCTAATGTGGTATTTCGAGGACCAGGC
GCAAATGGCGCTAGAAGCCCTGAAGGATCTGTTCATCACCAACCTCCTGC
CGGACGGCAGAAGGCTTGTCCCGTTTGAGTCTAGACCACTTCGGCAACTT
ACGGCCGCTAATACCCGCCGACAGCAGCAGTTATCATCCAAAGAGGGTGG
AGGCGGAGCAAGGGAGATGAAGGGTGCTGGAAAAGCGCTGCTAATGTGGT
ATTTCGAGGACCAGATTCGATCGAGGTTCTACCGAGTGGTAGCGGCCATC
GAGGCGGGTTCCAGGGACACAGTGGAGAATTTTAAGAGGTTCTCGCTCGA
AGCCGCTAAGATTCGATCGAGGTTCTACCGAGTGGTAGCGGCCATCGAGG
CGGGTTCCAGGGACACAGTGGAGAATTTTAAGAGGTTCTCGCTCGAAGCC
GCTAAGGATCTACTCGAGGCGAAACCAGAAGGCGAAGGTCGCCTGCTCGG
ACTCCTGGTGAACAAACTCGGTGACCCGGACCGAAAGATCAGCTCCAAGG
TATTTATAGAATGAGATCTACTCGAGGCGAAACCAGAAGGCGAAGGTCGC
CTGCTCGGACTCCTGGTGAACAAACTCGGTGACCCGGACCGAAAGATCAG
CTCCAAGGTATTTATAGAATGA
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