prot_H-paniculata_contig1807.4365.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1807.4365.1
Unique Nameprot_H-paniculata_contig1807.4365.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length345
Homology
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BLAST of mRNA_H-paniculata_contig1807.4365.1 vs. uniprot
Match: A0A6H5KRQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRQ3_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 5.170e-18
Identity = 48/51 (94.12%), Postives = 49/51 (96.08%), Query Frame = 0 
Query:    2 ISKAEGQRKLSLILSDKRKKDPVGLLRAQRNGTLNEYLREDLAKHGLAVAG 52
            ISKAEGQRKLS ILS KRK+DPVGLLRAQRNGTLNEYLREDLAKHGLAVAG
Sbjct:    4 ISKAEGQRKLSQILSSKRKEDPVGLLRAQRNGTLNEYLREDLAKHGLAVAG 54
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BLAST of mRNA_H-paniculata_contig1807.4365.1 vs. uniprot
Match: D7G4B8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4B8_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 5.670e-11
Identity = 34/37 (91.89%), Postives = 35/37 (94.59%), Query Frame = 0 
Query:    2 ISKAEGQRKLSLILSDKRKKDPVGLLRAQRNGTLNEY 38
            ISKAEGQRKLS ILS KRK+DPVGLLRAQRNGTLNEY
Sbjct:    4 ISKAEGQRKLSQILSSKRKEDPVGLLRAQRNGTLNEY 40
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1807.4365.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRQ3_9PHAE5.170e-1894.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4B8_ECTSI5.670e-1191.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1807contigH-paniculata_contig1807:10176..19868 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1807.4365.1mRNA_H-paniculata_contig1807.4365.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1807 558..20213 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1807.4365.1 ID=prot_H-paniculata_contig1807.4365.1|Name=mRNA_H-paniculata_contig1807.4365.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=345bp
MISKAEGQRKLSLILSDKRKKDPVGLLRAQRNGTLNEYLREDLAKHGLAV
AGVTPPPAERAPTASTDLNQAASGASRGATNTSSYKVPTDGKLPRTFPGS
STSSAPTVSSPAAALAGSRSAHGSSVSASPPQPEASSRSTAPSRPTPGKL
SASRFNQFGRGSEAGSALGEGTKEGTGSSTSTRSSSSPPSRRRWTVGPSS
SPTLTEKSAVVKGVEAESVTGLGGKSIIPSRTKQEGEEEQQAATPVVEAE
PGTDIASVGNIAERFGGVKLRSSGGGCSKFGVAKAKVAGGVALVDSDSSS
GNSSARGGVVCGAHGGEKLFSSGGGGSGRIAELARRFEKDKSGN*
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