prot_H-paniculata_contig10674.435.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10674.435.1
Unique Nameprot_H-paniculata_contig10674.435.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length136
Homology
BLAST of mRNA_H-paniculata_contig10674.435.1 vs. uniprot
Match: D7FQW3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQW3_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 2.230e-28
Identity = 70/105 (66.67%), Postives = 75/105 (71.43%), Query Frame = 0
Query:    1 MTQPEGAPLA------TAEAALLDPEAL----GDASALERQISLLSTRIKSIAKHLQVTPTDAVSRKGLVALVKRRRFLLETLRHRDNARWLVTTEILGLRQRPD 95
            MTQP   PLA       A A+L +  A     GDA+ALE QISLLS RI SIA HL+ TPTDAVSRKGLV LVKRRR LLETLRHRDN RW+ TT  LGLRQRPD
Sbjct:  139 MTQPGVGPLAPVAGPAAAAASLAETLAKNKLEGDAAALEHQISLLSARIASIADHLKTTPTDAVSRKGLVVLVKRRRRLLETLRHRDNDRWMATTAALGLRQRPD 243          
BLAST of mRNA_H-paniculata_contig10674.435.1 vs. uniprot
Match: A0A1V5UPL6_9BACT (30S ribosomal protein S15 n=1 Tax=Lentisphaerae bacterium ADurb.Bin242 TaxID=1852900 RepID=A0A1V5UPL6_9BACT)

HSP 1 Score: 56.6 bits (135), Expect = 5.930e-8
Identity = 30/69 (43.48%), Postives = 44/69 (63.77%), Query Frame = 0
Query:   23 GDASALERQISLLSTRIKSIAKHLQVTPTDAVSRKGLVALVKRRRFLLETLRHRDNARWLVTTEILGLR 91
            GD  + E QI+LLSTRI  I +H+++   D  SR+GL+A+V RR+ LL  L   + A++L   E  G+R
Sbjct:   18 GDVGSPEVQIALLSTRIAEITEHMRLNKNDHSSRRGLMAMVNRRKRLLRYLSEENRAKYLELAEAFGIR 86          
BLAST of mRNA_H-paniculata_contig10674.435.1 vs. uniprot
Match: A0A2E0SHW7_9PLAN (30S ribosomal protein S15 n=1 Tax=Planctomyces sp. TaxID=37635 RepID=A0A2E0SHW7_9PLAN)

HSP 1 Score: 55.8 bits (133), Expect = 1.150e-7
Identity = 30/69 (43.48%), Postives = 47/69 (68.12%), Query Frame = 0
Query:   24 DASALERQISLLSTRIKSIAKHLQVTPTDAVSRKGLVALVKRRRFLLETLRHRDNARWLVTTEILGLRQ 92
            D  + E QI+LL+ RI ++ +HL+V   D  SR+GL+ALV RRR LL+ L  +D++++L   E L +R+
Sbjct:   21 DCGSSEVQIALLTHRINTLTEHLKVNKKDHSSRRGLLALVSRRRSLLDYLNKKDHSKYLSMLERLSIRK 89          
BLAST of mRNA_H-paniculata_contig10674.435.1 vs. uniprot
Match: A0A2E5DTJ5_9PROT (30S ribosomal protein S15 n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E5DTJ5_9PROT)

HSP 1 Score: 55.8 bits (133), Expect = 1.150e-7
Identity = 28/69 (40.58%), Postives = 48/69 (69.57%), Query Frame = 0
Query:   24 DASALERQISLLSTRIKSIAKHLQVTPTDAVSRKGLVALVKRRRFLLETLRHRDNARWLVTTEILGLRQ 92
            D  + E Q+++L++RI  +++H+QV   D  SR+GL+A+V +RR LL+ L+ +D AR+    E LG+R+
Sbjct:   21 DTGSPEVQVAILTSRINELSEHMQVHKKDFHSRRGLLAMVAKRRKLLDYLKKKDEARYKTLIERLGIRR 89          
BLAST of mRNA_H-paniculata_contig10674.435.1 vs. uniprot
Match: RS15_KOCRD (30S ribosomal protein S15 n=16 Tax=Bacteria TaxID=2 RepID=RS15_KOCRD)

HSP 1 Score: 55.5 bits (132), Expect = 1.620e-7
Identity = 32/70 (45.71%), Postives = 46/70 (65.71%), Query Frame = 0
Query:   23 GDASALERQISLLSTRIKSIAKHLQVTPTDAVSRKGLVALVKRRRFLLETLRHRDNARWLVTTEILGLRQ 92
            GD  + E QI++LS RI  + +HL++   D  +R+GL+ALV RRR +L+ LR  D AR+    E LGLR+
Sbjct:   20 GDTGSPEVQIAVLSRRISDLTEHLKMHKHDHHTRRGLMALVGRRRRMLDYLRRTDIARYRALIERLGLRK 89          
BLAST of mRNA_H-paniculata_contig10674.435.1 vs. uniprot
Match: A0A849A6X0_9ACTN (30S ribosomal protein S15 n=2 Tax=Nakamurella aerolata TaxID=1656892 RepID=A0A849A6X0_9ACTN)

HSP 1 Score: 55.5 bits (132), Expect = 1.620e-7
Identity = 33/70 (47.14%), Postives = 44/70 (62.86%), Query Frame = 0
Query:   23 GDASALERQISLLSTRIKSIAKHLQVTPTDAVSRKGLVALVKRRRFLLETLRHRDNARWLVTTEILGLRQ 92
            GD  + E Q++LLS RI  + +HL+    D  SR+GL+ALV RRR LL  L+  D AR+    E LGLR+
Sbjct:   20 GDTGSAEAQVALLSKRISDLTEHLKTHKHDHHSRRGLMALVGRRRRLLRHLQEIDIARYRSLIERLGLRR 89          
BLAST of mRNA_H-paniculata_contig10674.435.1 vs. uniprot
Match: UPI000406C45B (30S ribosomal protein S15 n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI000406C45B)

HSP 1 Score: 55.5 bits (132), Expect = 1.620e-7
Identity = 29/69 (42.03%), Postives = 44/69 (63.77%), Query Frame = 0
Query:   23 GDASALERQISLLSTRIKSIAKHLQVTPTDAVSRKGLVALVKRRRFLLETLRHRDNARWLVTTEILGLR 91
            GD  + E Q+++L+ RIK++ +H Q    D  SR+GL+A+V +RR LL  L+ +D  R+    E LGLR
Sbjct:   20 GDTGSPEVQVAILTDRIKTLTEHFQTNKKDNHSRRGLLAMVAKRRRLLAYLKKKDEGRYKTLIEKLGLR 88          
BLAST of mRNA_H-paniculata_contig10674.435.1 vs. uniprot
Match: RS15_XYLFA (30S ribosomal protein S15 n=13 Tax=Xylella TaxID=2370 RepID=RS15_XYLFA)

HSP 1 Score: 55.1 bits (131), Expect = 2.130e-7
Identity = 29/69 (42.03%), Postives = 45/69 (65.22%), Query Frame = 0
Query:   24 DASALERQISLLSTRIKSIAKHLQVTPTDAVSRKGLVALVKRRRFLLETLRHRDNARWLVTTEILGLRQ 92
            D  + E Q++LL+ RI+ + KH ++   D  SR+GL+ +V RRR LL+ L  +DN R+ +  E LGLR+
Sbjct:   18 DTGSPEVQVALLTARIELLTKHFKIHKKDHHSRRGLLQMVNRRRSLLDYLNKKDNERYKLLIEKLGLRR 86          
BLAST of mRNA_H-paniculata_contig10674.435.1 vs. uniprot
Match: A0A353X729_9PROT (30S ribosomal protein S15 n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A353X729_9PROT)

HSP 1 Score: 54.7 bits (130), Expect = 2.920e-7
Identity = 28/70 (40.00%), Postives = 47/70 (67.14%), Query Frame = 0
Query:   23 GDASALERQISLLSTRIKSIAKHLQVTPTDAVSRKGLVALVKRRRFLLETLRHRDNARWLVTTEILGLRQ 92
            GD  + E Q++LL+ RI ++++H++    D  SR+GL+A+V RRR LL+ L+ +D  R+    + LGLR+
Sbjct:   16 GDTGSPEVQVALLTQRISTLSEHMKTHKKDLHSRRGLLAMVARRRKLLDYLKRKDAGRYTALIKRLGLRR 85          
BLAST of mRNA_H-paniculata_contig10674.435.1 vs. uniprot
Match: A0A7Z9L7Y8_9PLAN (30S ribosomal protein S15 n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7Z9L7Y8_9PLAN)

HSP 1 Score: 53.9 bits (128), Expect = 6.370e-7
Identity = 30/70 (42.86%), Postives = 45/70 (64.29%), Query Frame = 0
Query:   23 GDASALERQISLLSTRIKSIAKHLQVTPTDAVSRKGLVALVKRRRFLLETLRHRDNARWLVTTEILGLRQ 92
            GD  + E QI++L+TRI  + +H++    D  SR+GL+ALV RRR LL+ LR  D  ++L     LG+R+
Sbjct:   20 GDTGSPEVQIAILTTRINGLTEHMRTHKKDYASRRGLLALVSRRRRLLDYLRRVDPQQYLDIIGRLGIRK 89          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10674.435.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQW3_ECTSI2.230e-2866.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1V5UPL6_9BACT5.930e-843.4830S ribosomal protein S15 n=1 Tax=Lentisphaerae ba... [more]
A0A2E0SHW7_9PLAN1.150e-743.4830S ribosomal protein S15 n=1 Tax=Planctomyces sp.... [more]
A0A2E5DTJ5_9PROT1.150e-740.5830S ribosomal protein S15 n=2 Tax=Alphaproteobacte... [more]
RS15_KOCRD1.620e-745.7130S ribosomal protein S15 n=16 Tax=Bacteria TaxID=... [more]
A0A849A6X0_9ACTN1.620e-747.1430S ribosomal protein S15 n=2 Tax=Nakamurella aero... [more]
UPI000406C45B1.620e-742.0330S ribosomal protein S15 n=1 Tax=Hellea balneolen... [more]
RS15_XYLFA2.130e-742.0330S ribosomal protein S15 n=13 Tax=Xylella TaxID=2... [more]
A0A353X729_9PROT2.920e-740.0030S ribosomal protein S15 n=1 Tax=Rhodospirillacea... [more]
A0A7Z9L7Y8_9PLAN6.370e-742.8630S ribosomal protein S15 n=1 Tax=Planctomycetacea... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000589Ribosomal protein S15SMARTSM01387Ribosomal_S15_2coord: 13..91
e-value: 5.9E-7
score: 35.9
IPR000589Ribosomal protein S15PFAMPF00312Ribosomal_S15coord: 23..91
e-value: 2.7E-14
score: 53.1
NoneNo IPR availableGENE3D1.10.287.10coord: 17..92
e-value: 3.8E-14
score: 54.7
NoneNo IPR availablePRODOMPD157043coord: 21..91
e-value: 1.0E-9
score: 145.0
IPR009068S15/NS1, RNA-bindingSUPERFAMILY47060S15/NS1 RNA-binding domaincoord: 23..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10674contigH-paniculata_contig10674:2779..5138 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10674.435.1mRNA_H-paniculata_contig10674.435.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10674 764..5180 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10674.435.1 ID=prot_H-paniculata_contig10674.435.1|Name=mRNA_H-paniculata_contig10674.435.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=136bp
MTQPEGAPLATAEAALLDPEALGDASALERQISLLSTRIKSIAKHLQVTP
TDAVSRKGLVALVKRRRFLLETLRHRDNARWLVTTEILGLRQRPDGSSSA
AAAAVAAAAAAGDNFSAARRARRRDRGKAKRSDRK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000589Ribosomal_S15
IPR009068S15_NS1_RNA-bd