prot_H-paniculata_contig18021.4349.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig18021.4349.1
Unique Name	prot_H-paniculata_contig18021.4349.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	117

Homology

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BLAST of mRNA_H-paniculata_contig18021.4349.1 vs. uniprot
Match: D7FWI8_ECTSI (Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7FWI8_ECTSI)

HSP 1 Score: 213 bits (541), Expect = 1.480e-69
Identity = 113/116 (97.41%), Postives = 114/116 (98.28%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGDKKKGNKRLESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKKSAKAPKKAGDKK+ NKR ESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116

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BLAST of mRNA_H-paniculata_contig18021.4349.1 vs. uniprot
Match: A0A6U0X3U9_9STRA (Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A6U0X3U9_9STRA)

HSP 1 Score: 197 bits (500), Expect = 4.290e-63
Identity = 102/116 (87.93%), Postives = 111/116 (95.69%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGDKKKGNKRLESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKKSAKAPKKAGDK K  KR ESYSSYIYKVLKQVHP+TGISK+GMSIMNSFIND+FER+AGE+G+L RY+KKATLSSRE+QT+VRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   15 MAKTPSKKSAKAPKKAGDKVKKGKRTESYSSYIYKVLKQVHPETGISKKGMSIMNSFINDIFERLAGEAGRLARYSKKATLSSREIQTSVRLMLPGELAKHAVSEGTKAVTKFTSS 130

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BLAST of mRNA_H-paniculata_contig18021.4349.1 vs. uniprot
Match: A0A836CJ22_9STRA (Histone H2B n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ22_9STRA)

HSP 1 Score: 193 bits (491), Expect = 6.640e-62
Identity = 104/117 (88.89%), Postives = 109/117 (93.16%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGD-KKKGNKRLESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAK PSKK+AKAPKKA D KKK  KR ESY SYIYKVLKQVHPDTGISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 117

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BLAST of mRNA_H-paniculata_contig18021.4349.1 vs. uniprot
Match: A0A485K2U0_9STRA (Histone H2B n=29 Tax=Stramenopiles TaxID=33634 RepID=A0A485K2U0_9STRA)

HSP 1 Score: 192 bits (489), Expect = 1.380e-61
Identity = 101/118 (85.59%), Postives = 111/118 (94.07%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGDKKKGNK--RLESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKKSAKAPKK G+K K  K  R+ESYS+YIYKVLKQVHP+TGISKRGMSIMNSFIND+FER+A E+GKL+RYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKTPSKKSAKAPKKTGEKGKNRKVKRIESYSTYIYKVLKQVHPETGISKRGMSIMNSFINDIFERIASEAGKLSRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 118

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BLAST of mRNA_H-paniculata_contig18021.4349.1 vs. uniprot
Match: H2B_OLILU (Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=83000 RepID=H2B_OLILU)

HSP 1 Score: 191 bits (486), Expect = 3.380e-61
Identity = 99/116 (85.34%), Postives = 111/116 (95.69%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGDKKKGNKRLESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKK+AKAPKKAG K+  NKR+E+YSSYIYKVLKQVHPDTGISKRGMSIMNSFIND+FER+AGE+ +L RYNK++TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTS+
Sbjct:    1 MAKTPSKKAAKAPKKAGSKR--NKRVETYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDIFERLAGEASRLARYNKRSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSN 114

[Close]

BLAST of mRNA_H-paniculata_contig18021.4349.1 vs. uniprot
Match: A0A836CJT3_9STRA (Histone H2B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJT3_9STRA)

HSP 1 Score: 193 bits (491), Expect = 4.510e-60
Identity = 104/117 (88.89%), Postives = 109/117 (93.16%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGD-KKKGNKRLESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAK PSKK+AKAPKKA D KKK  KR ESY SYIYKVLKQVHPDTGISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:  134 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 250

[Close]

BLAST of mRNA_H-paniculata_contig18021.4349.1 vs. uniprot
Match: B7FWR8_PHATC (Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 RepID=B7FWR8_PHATC)

HSP 1 Score: 187 bits (475), Expect = 1.710e-59
Identity = 98/116 (84.48%), Postives = 106/116 (91.38%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGDKKKGNKRLESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSK+SAKAPKKA    K  KR E+YSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL  YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+SS
Sbjct:    1 MAKTPSKQSAKAPKKAATGTKSKKRTETYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIATEAGKLATYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSS 116

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BLAST of mRNA_H-paniculata_contig18021.4349.1 vs. uniprot
Match: A0A6U6DWX5_9STRA (Histone H2B n=4 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6DWX5_9STRA)

HSP 1 Score: 183 bits (465), Expect = 6.720e-58
Identity = 98/116 (84.48%), Postives = 108/116 (93.10%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGDKKKGNKRLESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKK+A APKKAG K+   KR ESYSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL+ YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S+
Sbjct:    8 MAKTPSKKAA-APKKAGGKR-SRKRTESYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIASEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSA 121

[Close]

BLAST of mRNA_H-paniculata_contig18021.4349.1 vs. uniprot
Match: B8BX20_THAPS (Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 RepID=B8BX20_THAPS)

HSP 1 Score: 182 bits (461), Expect = 2.650e-57
Identity = 100/120 (83.33%), Postives = 112/120 (93.33%), Query Frame = 0

Query:    1 MAKTPSKKS-AKAPKKA--GDKKK-GNKRLESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSK++ AKA KKA  GDKKK   KR+ESYS+YIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+AGE+GKL+ YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S+
Sbjct:    1 MAKTPSKQAPAKAAKKAATGDKKKRSKKRVESYSTYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIAGEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSA 120

[Close]

BLAST of mRNA_H-paniculata_contig18021.4349.1 vs. uniprot
Match: M4B6T6_HYAAE (Histone H2B n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B6T6_HYAAE)

HSP 1 Score: 182 bits (463), Expect = 5.550e-57
Identity = 95/116 (81.90%), Postives = 109/116 (93.97%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGDKKKGNKRLESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKK+AK   K+G K +G KR+ESYS+YIYKVL+QVHP+TGISKRGMSIMNSFIND+FER+A E+GKL+RYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   51 MAKTPSKKAAKVVAKSG-KGRGKKRVESYSTYIYKVLRQVHPETGISKRGMSIMNSFINDIFERIASEAGKLSRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSA 165

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig18021.4349.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig18021.4349.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FWI8_ECTSI	1.480e-69	97.41	Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7...	[more]
A0A6U0X3U9_9STRA	4.290e-63	87.93	Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 R...	[more]
A0A836CJ22_9STRA	6.640e-62	88.89	Histone H2B n=2 Tax=Tribonema minus TaxID=303371 R...	[more]
A0A485K2U0_9STRA	1.380e-61	85.59	Histone H2B n=29 Tax=Stramenopiles TaxID=33634 Rep...	[more]
H2B_OLILU	3.380e-61	85.34	Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=830...	[more]
A0A836CJT3_9STRA	4.510e-60	88.89	Histone H2B n=1 Tax=Tribonema minus TaxID=303371 R...	[more]
B7FWR8_PHATC	1.710e-59	84.48	Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 Re...	[more]
A0A6U6DWX5_9STRA	6.720e-58	84.48	Histone H2B n=4 Tax=Odontella aurita TaxID=265563 ...	[more]
B8BX20_THAPS	2.650e-57	83.33	Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 Re...	[more]
M4B6T6_HYAAE	5.550e-57	81.90	Histone H2B n=1 Tax=Hyaloperonospora arabidopsidis...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000558	Histone H2B	PRINTS	PR00621	HISTONEH2B	coord: 29..47 score: 84.56 coord: 100..113 score: 92.65 coord: 87..100 score: 90.61 coord: 70..87 score: 56.83 coord: 48..68 score: 67.66
IPR000558	Histone H2B	SMART	SM00427	h2b3	coord: 19..115 e-value: 1.2E-69 score: 247.3
IPR000558	Histone H2B	PANTHER	PTHR23428	HISTONE H2B	coord: 4..116
IPR000558	Histone H2B	PROSITE	PS00357	HISTONE_H2B	coord: 84..106
IPR009072	Histone-fold	GENE3D	1.10.20.10		coord: 1..116 e-value: 3.3E-56 score: 190.7
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 4..116
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 3..92 e-value: 7.2E-18 score: 65.2
None	No IPR available	PANTHER	PTHR23428:SF196	HISTONE H2B TYPE 1-N	coord: 4..116

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig18021	contig	H-paniculata_contig18021:4664..5014 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig18021.4349.1	mRNA_H-paniculata_contig18021.4349.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig18021 4664..5014 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig18021.4349.1 ID=prot_H-paniculata_contig18021.4349.1|Name=mRNA_H-paniculata_contig18021.4349.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=117bp
MAKTPSKKSAKAPKKAGDKKKGNKRLESYSSYIYKVLKQVHPDTGISKRG
MSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAK
HAVSEGTKAVTKFTSS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000558	Histone_H2B
IPR009072	Histone-fold
IPR007125	Histone_H2A/H2B/H3