prot_H-paniculata_contig17991.4338.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17991.4338.1
Unique Nameprot_H-paniculata_contig17991.4338.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length346
Homology
BLAST of mRNA_H-paniculata_contig17991.4338.1 vs. uniprot
Match: A0A5S6QJX2_TRIMR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QJX2_TRIMR)

HSP 1 Score: 218 bits (555), Expect = 2.440e-63
Identity = 139/447 (31.10%), Postives = 205/447 (45.86%), Query Frame = 0
Query:    3 ALVENGTWESKDPGRLPAGRKKIRTKWIFKRKLNEDGNVARYKARLVAQGFSQVEGEDFFETGAPVARLSTLRTVFSLATEQDFELESMDVNAAYLNAPVEETLFVQLPPDLN------------------------WNNTLDDFLVEIGLQRSIIDHAYTSRDEMGKTGLLVAVYVDDLVIASHRKEVD---------------------------------------------------------------------------------EFKGMVGPLMYASTGTRPDITYEVNQAACRMENQCRKDFSTCKRIFRYLTTVPDPGIMFGGKSNGHGQ-EGFVGADWAEDVKDRKSTTGYIFKLNGGTISWCSRKQKLVTWSSKEAEYVAAGEARKEAIYLRGLLGSIGFGCRGSTTKFEGNESAINLSKGTGAHCRTKHIGVRWH 343
            +L  +  WE  D   LP G++ I  KW+FK K ++ GN+  YKARLVA+GFSQ++G D+ +T APV R  T+R +F++   ++  +  +DV  AYLN  ++E LF++ PP  +                        WN    D L ++G + +  D    SR E   T   V +YVDDL+IA    E+                                                                                  E++  +G L+Y +T TRPDI++ V Q    ME+  ++D+   KR+ RYL   P   + F   +NG  +  GFV ADWA D  DRKST+GY FK+   T++W SRKQ  V  SS EAEY+AA EA ++ +++R +L  IG      T  +E N+  I +++      RTKHI +R+H
Sbjct:    2 SLERHKVWEIAD---LPPGKRTISAKWVFKAKRDDQGNIHTYKARLVARGFSQIQGRDYDKTFAPVVRHETVRILFAVVAMKNMHVRHVDVKTAYLNGKLDEELFLEPPPGFSQPTTGGKVLRLRRSLYGLKQSARVWNQVATDALQKLGFRPNRADPCLFSRSEKNNTMSYVLLYVDDLLIAGSSPELTCDVGKQLNSYFEIKDLGEVRQYLGMQVEREEDGSFLLYQAAKVRHLLKEHGLLDAKPVATPMEANFLSSTEEESPKLPDNAEYRKAIGSLLYLATATRPDISFAVGQLCRCMEHPTQRDWKAVKRVMRYLAGSPYRKLRF--SANGSIKLSGFVDADWAGDQADRKSTSGYAFKVGTSTVAWSSRKQSFVALSSTEAEYIAASEACRDLLWIRQVLEDIGIEQVEPTIVYEDNQGCIKMAQSERHTRRTKHIDIRYH 443          
BLAST of mRNA_H-paniculata_contig17991.4338.1 vs. uniprot
Match: A0A5S6R675_TRIMR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6R675_TRIMR)

HSP 1 Score: 217 bits (552), Expect = 6.620e-63
Identity = 147/441 (33.33%), Postives = 209/441 (47.39%), Query Frame = 0
Query:    1 MGALVENGTWESKDPGRLPAGRKKIRTKWIFKRKLNEDGNVARYKARLVAQGFSQVEGEDFFETGAPVARLSTLRTVFSLATEQDFELESMDVNAAYLNAPVEETLFVQLPPDLN----------------------WNNTLDDFLVEIGLQRSIIDHAYTSRDEMGKTGLLVAVYVDD-LVIASHRKEVDEF-----------------------------------KGM----------------------------------------VGPLMYASTGTRPDITYEVNQAACRMENQCRKDFSTCKRIFRYLTTVPDPGIMFGGKSNGHGQEGFVGADWAEDVKDRKSTTGYIFKLNGGTISWCSRKQKLVTWSSKEAEYVAAGEARKEAIYLRGLLGSIGFGCRGSTTKFEGNESAINLSKGTGAHCRTKHIGVRWH 343
            M +L EN TW       LP  +K +  +W+ + K   DGNV RYKARLVA+GF+Q  G D+ ET +PVAR  T+RT+ ++A ++   L+  DV  A+L   +E+ ++++ P   +                      WN +  +F+ + GL++   D     R+  G+  L+VA+YVDD LV  S  +EVD+F                                   KG                                         VG LMY +  TRPDI Y V+ A+ ++E+  + D+   KRIF+YL    D GI++G KSN    E +  AD+A DVK RKST+G + K NG  I+W S KQ+L   S+ EAEY+AA E  KE I+L GLL  +G      T K + N  A  L +    H RTKHI V++H
Sbjct:    5 MQSLAENRTWILTV---LPENKKVLNCRWVLRVKTKADGNVDRYKARLVAKGFAQKYGIDYDETFSPVARFDTVRTILAVAAKEGLLLKQFDVKTAFLYGSLEKEVYMKQPEGFDDGSGRVCKLQRSLYGLKQAPRCWNASFKEFMRKQGLEQCHADPCLFVRNGNGQK-LIVAIYVDDGLVAGSSNEEVDKFLEKLQEEFEVTVGSLDCFLGMQIQRGEDGSVFLCQKGYCERILNRFGMEGSNKVSTPCVKRAEETEEALDERAPYSSAVGSLMYLAIATRPDIAYAVSTASQKLESPTKSDWEAVKRIFKYLRGTTDFGILYGTKSNFGSLEAYSDADFAGDVKSRKSTSGVVCKYNGTVITWLSNKQQLTALSTCEAEYIAASEGAKEVIWLTGLLKELGVNLERPTLKMD-NAGAEKLVRNPEFHKRTKHIAVKYH 440          
BLAST of mRNA_H-paniculata_contig17991.4338.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM)

HSP 1 Score: 217 bits (552), Expect = 2.670e-62
Identity = 146/454 (32.16%), Postives = 206/454 (45.37%), Query Frame = 0
Query:    1 MGALVENGTWESKDPGRLPAGRKKIRTKWIFKRKLNEDGNVARYKARLVAQGFSQVEGEDFFETGAPVARLSTLRTVFSLATEQDFELESMDVNAAYLNAPVEETLFVQLPPDL------------------------NWNNTLDDFLVEIGLQRSIIDHAYTSRDEMGKTGLLVAVYVDDLVIA-------SHRK---------------------------------------------------------------------------EVDEFKGM-----VGPLMYASTGTRPDITYEVNQAACRMENQCRKDFSTCKRIFRYLTTVPDPGIMFGGKSNGHGQEGFVGADWAEDVKDRKSTTGYIFKLNGGTISWCSRKQKLVTWSSKEAEYVAAGEARKEAIYLRGLLGSIGFGCRGSTTKFEGNESAINLSKGTGAHCRTKHIGVRWH 343
            +G + + GTWE  +    P G   + + W+FK K +  G +A+YKARLVAQGFSQ+ G D+ +T APVA+LS++R + +LA   D+EL  MDV  AYLN  +EE +F++ PP                           W   L    +++G  RS +DH+   R        +VAV VDDL IA       SH K                                                                           + D+ + +     +G LMYA+ GTRPD++Y V   +  M+N     +   KR+ RYL    +  + +GG  N +G EGF  ADW      R+S +GY+F ++GG +SW S+KQ +V  SS EAEYVA   A KE ++ R  LG I       TT +  N+SAI L+K    H RTKHI +R+H
Sbjct:   53 LGRMKKMGTWELAEK---PPGANVVGSWWVFKIKRDASGAIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFPTPGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGFARSSVDHSVFFRHGPNGEIAIVAVSVDDLAIAANSVDEMSHIKSALKLKFEMTDLGEIHWLLGLEIKRDRRGRTISMLQRAYIDTILSRFNLQDAKSLTTAIDPSFSLTTDQSPSTPQQYDDMRNILYREAIGSLMYAAIGTRPDVSYAVTALSQFMQNPGHPHWEAAKRVMRYLKGTKEEWLTYGG-DNANGMEGFSDADWGSS-DHRRSISGYVFLIDGGAVSWSSKKQPIVALSSTEAEYVAMTHAAKEVLWTRAFLGEIISPFDKPTTLYADNQSAITLAKDNLYHARTKHIAIRFH 501          
BLAST of mRNA_H-paniculata_contig17991.4338.1 vs. uniprot
Match: A0A5S6QN85_TRIMR (Integrase catalytic domain-containing protein n=2 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QN85_TRIMR)

HSP 1 Score: 222 bits (565), Expect = 4.760e-62
Identity = 142/447 (31.77%), Postives = 208/447 (46.53%), Query Frame = 0
Query:    3 ALVENGTWESKDPGRLPAGRKKIRTKWIFKRKLNEDGNVARYKARLVAQGFSQVEGEDFFETGAPVARLSTLRTVFSLATEQDFELESMDVNAAYLNAPVEETLFVQLPPDLN------------------------WNNTLDDFLVEIGLQRSIIDHAYTSRDEMGKTGLLVAVYVDDLVIASHRKEVD---------------------------------------------------------------------------------EFKGMVGPLMYASTGTRPDITYEVNQAACRMENQCRKDFSTCKRIFRYLTTVPDPGIMFGGKSNGHGQ-EGFVGADWAEDVKDRKSTTGYIFKLNGGTISWCSRKQKLVTWSSKEAEYVAAGEARKEAIYLRGLLGSIGFGCRGSTTKFEGNESAINLSKGTGAHCRTKHIGVRWH 343
            +L ++  WE  D   LP G++ I  KW+FK K ++ GN+  YKARLVA+GFSQ++G D+ ET APV R  T+R +F++A  ++  +  +DV  AYLN  ++E LF++ PP  +                        WN    D L ++G + +  D    SR+E   T   V +YVDDL+IA    E+                                                                                  E++  +G L+Y +T TRPDI++ V Q    ME+  ++D+   KR+ RYL   P   + F   +NG  +  GFV ADWA D  DRKST+GY FK+   T++W SRKQ  V  SS EAEYVAA EA ++ +++R +L  IG      T  +E N+  I +++      RTKHI +R+H
Sbjct:  382 SLEKHKVWEIAD---LPPGKRTISAKWVFKAKRDDQGNIHTYKARLVARGFSQIQGRDYDETFAPVVRHETVRILFAVAAMKNMHVRHVDVKTAYLNGKLDEELFLEPPPGFSQPTTDGKVLRLRRSLYGLKQSARVWNQVATDALQKLGFRPNRADPCLFSRNEKNNTMSYVLLYVDDLLIAGSSPELTCDVGKQLNSYFEIKDLGEVRQYLGMQVEREEDGSFLLYQAAKVRHLLKEHGLLDAKPVATPMEANFLSSTEEESPKLPDNAEYRKAIGSLLYLATATRPDISFAVGQLCRCMEHPTQRDWKAVKRVMRYLAGSPYRKLRF--SANGSIKLSGFVDADWAGDHADRKSTSGYAFKVGTSTVAWSSRKQSFVALSSTEAEYVAASEACRDLLWIRQVLEDIGIKQVEPTIVYEDNQGCIKMAQSERHTRRTKHIDIRYH 823          
BLAST of mRNA_H-paniculata_contig17991.4338.1 vs. uniprot
Match: A0A438FT54_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FT54_VITVI)

HSP 1 Score: 214 bits (545), Expect = 2.840e-61
Identity = 146/448 (32.59%), Postives = 215/448 (47.99%), Query Frame = 0
Query:    1 MGALVENGTWESKDPGRLPAGRKKIRTKWIFKRKLNEDGNVARYKARLVAQGFSQVEGEDFFETGAPVARLSTLRTVFSLATEQDFELESMDVNAAYLNAPVEETLFVQLPPDL------------------------NWNNTLDDFLVEIGLQRSIIDHAYTSRDEMGKTGLLVAVYVDDLVIASHRKEV-----------------------------------------------DEF--------------------------------KGMVGPLMYASTGTRPDITYEVNQAACRMENQCRKDFSTCKRIFRYLTTVPDPGIMF--GGKSNGHGQEGFVGADWAEDVKDRKSTTGYIFKLNGGTISWCSRKQKLVTWSSKEAEYVAAGEARKEAIYLRGLLGSIGFGCRGSTTKFEGNESAINLSKGTGAHCRTKHIGVRWH 343
            +G++ +N +WE  +   LP G+K I  KW++K KLN+DG V +YKARLVA+G+ Q  G D+ E  APVA+L T+R V S+A +  + +  +DV +A+L+  +EE +++  PP                           W + +D + +E G  +   +H   ++  + K  L+V +YVDDL+  S+ K +                                               D+F                                K +VG LMY  T TRPDI + VN  +  MEN         KRIFRYL    D GI++  G +S+     GF  +D+A D+ DRKST+G +F LN G I+W S+KQ++VT S+ EAE+VAA  +  +AI+LR LL  +    +G T  +  N SAI LSK    H R+KHI VR+H
Sbjct:   48 IGSIEKNNSWELVE---LPKGQKSIGVKWVYKTKLNKDGGVDKYKARLVAKGYKQEFGVDYKEVFAPVAKLDTIRLVLSMAAQNSWSIHQLDVKSAFLHGELEEEVYIDQPPGYVKQGYENQVYKLKKALYGLKQAPRAWYSRIDAYFIEEGFIKCPYEHTLYTKYGVDKKILIVCLYVDDLIYTSNNKTMLADFKKSMMKGFDMTDMGLMHYFLGIEVVQSSAGVFISQKKYALEILDKFMLKDCNSVITPSEVGLKLSKSGAGKRVDSTLYKQIVGSLMYL-TSTRPDIMHAVNLISRYMENPTEVHLLAAKRIFRYLKGTVDFGILYKRGERSS---LIGFSDSDYAGDLDDRKSTSGAVFMLNSGAITWSSKKQQIVTLSTTEAEFVAAASSSCQAIWLRRLLEVLYNQQQGPTVIYCDNLSAIKLSKNLVLHGRSKHIDVRYH 488          
BLAST of mRNA_H-paniculata_contig17991.4338.1 vs. uniprot
Match: A0A0J7K6W1_LASNI (Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K6W1_LASNI)

HSP 1 Score: 221 bits (563), Expect = 5.810e-61
Identity = 144/448 (32.14%), Postives = 199/448 (44.42%), Query Frame = 0
Query:    3 ALVENGTWESKDPGRLPAGRKKIRTKWIFKRKLNEDGNVARYKARLVAQGFSQVEGEDFFETGAPVARLSTLRTVFSLATEQDFELESMDVNAAYLNAPVEETLFVQLPPDLN------------------------WNNTLDDFLVEIGLQRSIIDHAYTSRDEMGKTGLLVAVYVDDLVIASHRKEV---------------------------------------------------------------------------------DEFKGMVGPLMYASTGTRPDITYEVNQAACRMENQCRKDFSTCKRIFRYLTTVPDPGIMFG--GKSNGHGQEGFVGADWAEDVKDRKSTTGYIFKLNGGTISWCSRKQKLVTWSSKEAEYVAAGEARKEAIYLRGLLGSIGFGCRGSTTKFEGNESAINLSKGTGAHCRTKHIGVRWH 343
            +L E+ TWE  D   LP G+K I  KW+FK KL+ +G V  YKARLVA+GFSQ  GED+ ET APV +  T+R +  +A  +   +  +DV +AYLN  +EE +F++ PP                           WN   ++ L ++G Q    D    +R E G     V +YVDDL++A    EV                                                                                  +++  +G L+Y +T +RPDI   V      +EN   +D+   KR+ RYL +  D  +     GK+     E FV ADWA D  DRKST+GY+F+L  GT++W SRKQ  V  SS EAEY+AA  A KE ++LR LL  +     G T   E N+  I+L +      RTKHI VR+H
Sbjct:  833 SLNEHQTWELTD---LPPGKKAITCKWVFKAKLDSEGQVHTYKARLVARGFSQRYGEDYDETFAPVVKHETIRILLLVAAHKGLHVRHLDVKSAYLNGKLEEEIFLEQPPGFQKRGHESKVLRLLKSLYGLKQSARAWNKRANEALAQLGFQSKNADQCLYTRKEKGNNTTYVLLYVDDLLVAGTSAEVTQKVSKDLQRHFNIKDLGNVNHYLGIQIEREADGSFLLSQKGKISKMLEEYGLLEPKPMATPMETGFLSSEADDSIKLPNNSQYRKAIGSLLYIATVSRPDIALAVGILCRCVENPTERDWKAVKRVMRYLASTIDKKLQLSSFGKTE---LECFVDADWAGDKTDRKSTSGYVFRLGNGTVAWSSRKQTTVAMSSTEAEYIAASYASKELLWLRQLLKDMNIPAEGPTIINEDNQGCIHLIESDRCEARTKHIHVRYH 1274          
BLAST of mRNA_H-paniculata_contig17991.4338.1 vs. uniprot
Match: H3GQK5_PHYRM (CCHC-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GQK5_PHYRM)

HSP 1 Score: 218 bits (554), Expect = 3.140e-60
Identity = 149/454 (32.82%), Postives = 214/454 (47.14%), Query Frame = 0
Query:    3 ALVENGTWESKDPGRLPAGRKKIRTKWIFKRKLNEDGNVARYKARLVAQGFSQVEGEDFFETGAPVARLSTLRTVFSLATEQDFELESMDVNAAYLNAPVEETLFVQLP--------PD----------------LNWNNTLDDFLVEIGLQRSIIDHA-YTSRDEMGKTGLLVAVYVDDLVIAS--------------HRKEV-------------------------------------------------------------------DE------FKGMVGPLMYASTGTRPDITYEVNQAACRMENQCRKDFSTCKRIFRYLTTVPDPGIMFGGKSNGHGQEGFVGADWAEDVKDRKSTTGYIFKLNGGTISWCSRKQKLVTWSSKEAEYVAAGEARKEAIYLRGLLGSIGFGCRGSTTK-FEGNESAINLSKGTGAHCRTKHIGVRWH 343
            +L++N TW   D   LP GRK I  +W+F+ K N+ G + R+KARLVA+GFSQ  G D+ E  APVA+ +++R V SLA +   +L  MDV  A+LN  ++E +++  P        PD                  WN T+DDF++++G ++   DH  Y  RD  G+  + VA+YVDDLV+AS              HR E+                                                                   DE      ++  VG LMY   GTRPD+   V   +    + C   +   KR+FRY+      GI F    +  G +G+  ADWA D++ R+ST+GY F +NGG ISW S+KQ+ V  SS EAEY+A  EA +EA++L+  L  +G        K +E N+ +I L+K    H RTKHI +R+H
Sbjct:  444 SLLKNDTW---DVVPLPKGRKAIGCRWVFRVKENQAGEIERFKARLVAKGFSQKYGIDYDEIFAPVAKFTSIRIVLSLAAKYSLKLHQMDVKTAFLNGVLDEDIYMAQPDGYVDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDIIFVALYVDDLVLASSSDKMLLDTKQALSHRFEMMDMGQLKYFLGMEIEQDVVTGKMSMRQTKFAKDILQKFSMDKSNPVKTPQDPGLKLTKAMCEGGCKHDETMVNVPYRNAVGCLMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVFRYIQGTKTHGIEFQASCH-DGLQGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASEEAVKIYEDNQGSIALTKNPQFHKRTKHIDIRYH 891          
BLAST of mRNA_H-paniculata_contig17991.4338.1 vs. uniprot
Match: H3H4L3_PHYRM (Uncharacterized protein n=5 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H4L3_PHYRM)

HSP 1 Score: 218 bits (556), Expect = 4.480e-60
Identity = 149/454 (32.82%), Postives = 211/454 (46.48%), Query Frame = 0
Query:    3 ALVENGTWESKDPGRLPAGRKKIRTKWIFKRKLNEDGNVARYKARLVAQGFSQVEGEDFFETGAPVARLSTLRTVFSLATEQDFELESMDVNAAYLNAPVEETLFVQLP--------PD----------------LNWNNTLDDFLVEIGLQRSIIDHA-YTSRDEMGKTGLLVAVYVDDLVIASHRKEVDE--------------------FKGM-------------------------------------------------------------------VGPLMYASTGTRPDITYEVNQAACRMENQCRKDFSTCKRIFRYLTTVPDPGIMFGGKSNGHGQEGFVGADWAEDVKDRKSTTGYIFKLNGGTISWCSRKQKLVTWSSKEAEYVAAGEARKEAIYLRGLLGSIGFGCRGSTTK-FEGNESAINLSKGTGAHCRTKHIGVRWH 343
            +L++N TW   D   LP GRK I  +W+F+ K N+ G V R+KARLVA+GFSQ  G D+ ET APVA+ +++R V SLA +   +L  MDV  A+LN  ++E +++  P        PD                  WN T+DDF++++G ++   DH  Y  RD  G+  + VA+YVDDLV+AS   E+ E                    F GM                                                                   VG LMY    TRPD+   V   +    + C   +   KR+ RYL   P  G+ F  + +  G  G+  ADWA D++ R+ST+GY F +NGG ISW S+KQ+ V  SS EAEY+A  EA +E ++L+  L  +G        K +E N+ +I L+K    H RTKHI +R+H
Sbjct:  681 SLLKNDTW---DVVPLPKGRKAIGCRWVFRVKENQAGEVERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGYVDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSSDELLESTKHALSKRFEMTDLGELEYFLGMEIKNDHGSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKNMCEGGCQHEDTMKNVPYRSAVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFS-REDSVGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEVVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYH 1128          
BLAST of mRNA_H-paniculata_contig17991.4338.1 vs. uniprot
Match: A0A5S6Q1K2_TRIMR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6Q1K2_TRIMR)

HSP 1 Score: 211 bits (536), Expect = 4.620e-60
Identity = 139/460 (30.22%), Postives = 208/460 (45.22%), Query Frame = 0
Query:    3 ALVENGTWESKDPGRLPAGRKKIRTKWIFKRKLNEDGNVARYKARLVAQGFSQVEGEDFFETGAPVARLSTLRTVFSLATEQDFELESMDVNAAYLNAPVEETLFVQLPPDLN----------------------WNNTLDDFLVEIGLQRSIIDHAYTSRDEMGKTGLLVAVYVDDLVIAS--------------------------------HRKE----------------------------------------------VDE--------FKGMVGPLMYASTGTRPDITYEVNQAACRMENQCRKDFSTCKRIFRYLTTVPDPGIMF-----------GGKSNGHGQEGFVGADWAEDVKDRKSTTGYIFKLNGGTISWCSRKQKLVTWSSKEAEYVAAGEARKEAIYLRGLLGSIGFGCRGSTTKFEGNESAINLSKGTGAHCRTKHIGVRWH 343
            AL +N TW   D   LP+ RK ++ KW+FK K+N  G  +++KARLVA+G+SQ    D+FET APVAR  ++RTV ++A ++D E+   DV  A+L+  ++E ++++ PP  +                      WN    DFL+ + L+R+  DH     +      +++A+YVDD ++                                  HR                                                 DE        +K  VG LM+  T TRPDI++E ++ +   EN     +   KRIFRYL    D  + F           G  S+G   + F  +DWA DV+DR+ST+GY+  L  G ++W +R Q  V  S+ E+EY+A  E  KE  +LR LL  +G G   +T+ +  N+ AI L+K    H RTKHI VR+H
Sbjct:   32 ALRKNNTWILTD---LPSDRKAVQCKWVFKTKINPSGGTSKFKARLVAKGYSQRPQIDYFETFAPVARYDSIRTVLAVAADEDLEILQFDVKTAFLHGSIDEIIYMEQPPCYDDQSGRVCKLQRAIYGLKQAPRAWNKRFSDFLISLNLRRTEADHCVYVSESGQHERVILALYVDDGLLCCSGISLLNDFVKKLSSEFEITVSDPSYFIGLEIHRDRSKRTIAVGQKAYVERILERFDMLNCKPIACPWNASWKLTKDMCPSTADERNEMLTIPYKAAVGSLMFLMTCTRPDISFETSKVSQFAENPGLPHWKAVKRIFRYLKGTQDMKLFFCPRMSSCEAHYGKTSDGFQLKAFCDSDWAGDVEDRRSTSGYVLTLCNGPVAWSTRVQTAVAQSTVESEYIAMSEVTKEVKWLRQLLSDLGRGQSNATSIYSDNQGAICLAKNPQFHRRTKHIDVRYH 488          
BLAST of mRNA_H-paniculata_contig17991.4338.1 vs. uniprot
Match: A0A2N9G4M2_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9G4M2_FAGSY)

HSP 1 Score: 218 bits (554), Expect = 6.570e-60
Identity = 133/367 (36.24%), Postives = 201/367 (54.77%), Query Frame = 0
Query:    3 ALVENGTWESKDPGRLPAGRKKIRTKWIFKRK-LNEDGNVARYKARLVAQGFSQVEGEDFFETGAPVARLSTLRTVFSLATEQDFELESMDVNAAYLNAPVEETLFVQLPPDLN------------------------WNNTLDDFLVEIGLQRSIIDHAYTSRDEMGKTGLLVAVYVDDLVIASHRK-EVDEFKGMVGPLMYASTGTRPDITYEVNQAACRMENQCRKDFSTCKRIFRYLTTVPDPGIMFGGKSNGHGQEGFVGADWAEDVKDRKSTTGYIFKLNGGTISWCSRKQKLVTWSSKEAEYVAAGEARKEAIYLRGLLGSIGFGCRGSTTKFEGNESAINLSKGTGAHCRTKHIGVRWH 343
            +L +N TWE  +   LP G+K I  KW+FK+K    +    R+KARLVA+G+SQ  G D+ E  +PV R +++R V +L  +QD ELE +DV  A+L+  +EE +F++ P                            W    D ++++IG  R   D     R     + + + +YVDD++IA+    E  E +   G L   ++G RPD+ + V+  +  M N  R+ ++  K IFRYL    + GI+F  +   +   G+V AD+A +V DR+STTGY+F L+GG I W S  Q +V  S+ EAEY+A  EA KEA++L+GL+  +G   +G       ++SAI L+K    H RTKHI VR+H
Sbjct:  708 SLSKNKTWELTE---LPKGKKPIGCKWVFKKKEAVSEKEGERFKARLVAKGYSQRHGIDYDEVFSPVVRHTSIRAVLALVADQDLELEQLDVKTAFLHGNLEEEIFMEQPEGFKQPGTENLVCRLKKSLYGLKQSPRQWYKRFDSYMIQIGYTRCEYDCCVYVRILEDGSYIFLLLYVDDMLIAAKSMCERTEGQESCGCLRKTTSG-RPDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWLKGLVKELGLN-QGGVQMHCDSQSAIYLAKNQVYHARTKHIDVRFH 1069          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17991.4338.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5S6QJX2_TRIMR2.440e-6331.10Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5S6R675_TRIMR6.620e-6333.33Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Y9ZVS1_9AGAM2.670e-6232.16Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5S6QN85_TRIMR4.760e-6231.77Integrase catalytic domain-containing protein n=2 ... [more]
A0A438FT54_VITVI2.840e-6132.59Retrovirus-related Pol polyprotein from transposon... [more]
A0A0J7K6W1_LASNI5.810e-6132.14Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=677... [more]
H3GQK5_PHYRM3.140e-6032.82CCHC-type domain-containing protein n=1 Tax=Phytop... [more]
H3H4L3_PHYRM4.480e-6032.82Uncharacterized protein n=5 Tax=Phytophthora ramor... [more]
A0A5S6Q1K2_TRIMR4.620e-6030.22Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N9G4M2_FAGSY6.570e-6036.24Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 115..173
e-value: 9.9E-7
score: 28.6
coord: 18..113
e-value: 8.0E-27
score: 94.4
NoneNo IPR availablePANTHERPTHR11439:SF242coord: 1..116
NoneNo IPR availablePANTHERPTHR11439:SF242coord: 173..302
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 173..302
coord: 1..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17991contigH-paniculata_contig17991:648..2077 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17991.4338.1mRNA_H-paniculata_contig17991.4338.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17991 648..2077 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17991.4338.1 ID=prot_H-paniculata_contig17991.4338.1|Name=mRNA_H-paniculata_contig17991.4338.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=346bp
MGALVENGTWESKDPGRLPAGRKKIRTKWIFKRKLNEDGNVARYKARLVA
QGFSQVEGEDFFETGAPVARLSTLRTVFSLATEQDFELESMDVNAAYLNA
PVEETLFVQLPPDLNWNNTLDDFLVEIGLQRSIIDHAYTSRDEMGKTGLL
VAVYVDDLVIASHRKEVDEFKGMVGPLMYASTGTRPDITYEVNQAACRME
NQCRKDFSTCKRIFRYLTTVPDPGIMFGGKSNGHGQEGFVGADWAEDVKD
RKSTTGYIFKLNGGTISWCSRKQKLVTWSSKEAEYVAAGEARKEAIYLRG
LLGSIGFGCRGSTTKFEGNESAINLSKGTGAHCRTKHIGVRWHGT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like