mRNA_H-paniculata_contig17991.4338.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig17991.4338.1 vs. uniprot
Match: A0A5S6QJX2_TRIMR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QJX2_TRIMR) HSP 1 Score: 218 bits (555), Expect = 2.440e-63 Identity = 139/447 (31.10%), Postives = 205/447 (45.86%), Query Frame = 1
Query: 7 ALVENGTWESKDPGRLPAGRKKIRTKWIFKRKLNEDGNVARYKARLVAQGFSQVEGEDFFETGAPVARLSTLRTVFSLATEQDFELESMDVNAAYLNAPVEETLFVQLPPDLN------------------------WNNTLDDFLVEIGLQRSIIDHAYTSRDEMGKTGLLVAVYVDDLVIASHRKEVD---------------------------------------------------------------------------------EFKGMVGPLMYASTGTRPDITYEVNQAACRMENQCRKDFSTCKRIFRYLTTVPDPGIMFGGKSNGHGQ-EGFVGADWAEDVKDRKSTTGYIFKLNGGTISWCSRKQKLVTWSSKEAEYVAAGEARKEAIYLRGLLGSIGFGCRGSTTKFEGNESAINLSKGTGAHCRTKHIGVRWH 1029
+L + WE D LP G++ I KW+FK K ++ GN+ YKARLVA+GFSQ++G D+ +T APV R T+R +F++ ++ + +DV AYLN ++E LF++ PP + WN D L ++G + + D SR E T V +YVDDL+IA E+ E++ +G L+Y +T TRPDI++ V Q ME+ ++D+ KR+ RYL P + F +NG + GFV ADWA D DRKST+GY FK+ T++W SRKQ V SS EAEY+AA EA ++ +++R +L IG T +E N+ I +++ RTKHI +R+H
Sbjct: 2 SLERHKVWEIAD---LPPGKRTISAKWVFKAKRDDQGNIHTYKARLVARGFSQIQGRDYDKTFAPVVRHETVRILFAVVAMKNMHVRHVDVKTAYLNGKLDEELFLEPPPGFSQPTTGGKVLRLRRSLYGLKQSARVWNQVATDALQKLGFRPNRADPCLFSRSEKNNTMSYVLLYVDDLLIAGSSPELTCDVGKQLNSYFEIKDLGEVRQYLGMQVEREEDGSFLLYQAAKVRHLLKEHGLLDAKPVATPMEANFLSSTEEESPKLPDNAEYRKAIGSLLYLATATRPDISFAVGQLCRCMEHPTQRDWKAVKRVMRYLAGSPYRKLRF--SANGSIKLSGFVDADWAGDQADRKSTSGYAFKVGTSTVAWSSRKQSFVALSSTEAEYIAASEACRDLLWIRQVLEDIGIEQVEPTIVYEDNQGCIKMAQSERHTRRTKHIDIRYH 443
BLAST of mRNA_H-paniculata_contig17991.4338.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM) HSP 1 Score: 217 bits (552), Expect = 2.670e-62 Identity = 146/454 (32.16%), Postives = 206/454 (45.37%), Query Frame = 1
Query: 1 MGALVENGTWESKDPGRLPAGRKKIRTKWIFKRKLNEDGNVARYKARLVAQGFSQVEGEDFFETGAPVARLSTLRTVFSLATEQDFELESMDVNAAYLNAPVEETLFVQLPPDL------------------------NWNNTLDDFLVEIGLQRSIIDHAYTSRDEMGKTGLLVAVYVDDLVIA-------SHRK---------------------------------------------------------------------------EVDEFKGM-----VGPLMYASTGTRPDITYEVNQAACRMENQCRKDFSTCKRIFRYLTTVPDPGIMFGGKSNGHGQEGFVGADWAEDVKDRKSTTGYIFKLNGGTISWCSRKQKLVTWSSKEAEYVAAGEARKEAIYLRGLLGSIGFGCRGSTTKFEGNESAINLSKGTGAHCRTKHIGVRWH 1029
+G + + GTWE + P G + + W+FK K + G +A+YKARLVAQGFSQ+ G D+ +T APVA+LS++R + +LA D+EL MDV AYLN +EE +F++ PP W L +++G RS +DH+ R +VAV VDDL IA SH K + D+ + + +G LMYA+ GTRPD++Y V + M+N + KR+ RYL + + +GG N +G EGF ADW R+S +GY+F ++GG +SW S+KQ +V SS EAEYVA A KE ++ R LG I TT + N+SAI L+K H RTKHI +R+H
Sbjct: 53 LGRMKKMGTWELAEK---PPGANVVGSWWVFKIKRDASGAIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFPTPGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGFARSSVDHSVFFRHGPNGEIAIVAVSVDDLAIAANSVDEMSHIKSALKLKFEMTDLGEIHWLLGLEIKRDRRGRTISMLQRAYIDTILSRFNLQDAKSLTTAIDPSFSLTTDQSPSTPQQYDDMRNILYREAIGSLMYAAIGTRPDVSYAVTALSQFMQNPGHPHWEAAKRVMRYLKGTKEEWLTYGG-DNANGMEGFSDADWGSS-DHRRSISGYVFLIDGGAVSWSSKKQPIVALSSTEAEYVAMTHAAKEVLWTRAFLGEIISPFDKPTTLYADNQSAITLAKDNLYHARTKHIAIRFH 501
BLAST of mRNA_H-paniculata_contig17991.4338.1 vs. uniprot
Match: A0A5S6QN85_TRIMR (Integrase catalytic domain-containing protein n=2 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QN85_TRIMR) HSP 1 Score: 222 bits (565), Expect = 4.760e-62 Identity = 142/447 (31.77%), Postives = 208/447 (46.53%), Query Frame = 1
Query: 7 ALVENGTWESKDPGRLPAGRKKIRTKWIFKRKLNEDGNVARYKARLVAQGFSQVEGEDFFETGAPVARLSTLRTVFSLATEQDFELESMDVNAAYLNAPVEETLFVQLPPDLN------------------------WNNTLDDFLVEIGLQRSIIDHAYTSRDEMGKTGLLVAVYVDDLVIASHRKEVD---------------------------------------------------------------------------------EFKGMVGPLMYASTGTRPDITYEVNQAACRMENQCRKDFSTCKRIFRYLTTVPDPGIMFGGKSNGHGQ-EGFVGADWAEDVKDRKSTTGYIFKLNGGTISWCSRKQKLVTWSSKEAEYVAAGEARKEAIYLRGLLGSIGFGCRGSTTKFEGNESAINLSKGTGAHCRTKHIGVRWH 1029
+L ++ WE D LP G++ I KW+FK K ++ GN+ YKARLVA+GFSQ++G D+ ET APV R T+R +F++A ++ + +DV AYLN ++E LF++ PP + WN D L ++G + + D SR+E T V +YVDDL+IA E+ E++ +G L+Y +T TRPDI++ V Q ME+ ++D+ KR+ RYL P + F +NG + GFV ADWA D DRKST+GY FK+ T++W SRKQ V SS EAEYVAA EA ++ +++R +L IG T +E N+ I +++ RTKHI +R+H
Sbjct: 382 SLEKHKVWEIAD---LPPGKRTISAKWVFKAKRDDQGNIHTYKARLVARGFSQIQGRDYDETFAPVVRHETVRILFAVAAMKNMHVRHVDVKTAYLNGKLDEELFLEPPPGFSQPTTDGKVLRLRRSLYGLKQSARVWNQVATDALQKLGFRPNRADPCLFSRNEKNNTMSYVLLYVDDLLIAGSSPELTCDVGKQLNSYFEIKDLGEVRQYLGMQVEREEDGSFLLYQAAKVRHLLKEHGLLDAKPVATPMEANFLSSTEEESPKLPDNAEYRKAIGSLLYLATATRPDISFAVGQLCRCMEHPTQRDWKAVKRVMRYLAGSPYRKLRF--SANGSIKLSGFVDADWAGDHADRKSTSGYAFKVGTSTVAWSSRKQSFVALSSTEAEYVAASEACRDLLWIRQVLEDIGIKQVEPTIVYEDNQGCIKMAQSERHTRRTKHIDIRYH 823
BLAST of mRNA_H-paniculata_contig17991.4338.1 vs. uniprot
Match: A0A0J7K6W1_LASNI (Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K6W1_LASNI) HSP 1 Score: 221 bits (563), Expect = 5.810e-61 Identity = 144/448 (32.14%), Postives = 199/448 (44.42%), Query Frame = 1
Query: 7 ALVENGTWESKDPGRLPAGRKKIRTKWIFKRKLNEDGNVARYKARLVAQGFSQVEGEDFFETGAPVARLSTLRTVFSLATEQDFELESMDVNAAYLNAPVEETLFVQLPPDLN------------------------WNNTLDDFLVEIGLQRSIIDHAYTSRDEMGKTGLLVAVYVDDLVIASHRKEV---------------------------------------------------------------------------------DEFKGMVGPLMYASTGTRPDITYEVNQAACRMENQCRKDFSTCKRIFRYLTTVPDPGIMFG--GKSNGHGQEGFVGADWAEDVKDRKSTTGYIFKLNGGTISWCSRKQKLVTWSSKEAEYVAAGEARKEAIYLRGLLGSIGFGCRGSTTKFEGNESAINLSKGTGAHCRTKHIGVRWH 1029
+L E+ TWE D LP G+K I KW+FK KL+ +G V YKARLVA+GFSQ GED+ ET APV + T+R + +A + + +DV +AYLN +EE +F++ PP WN ++ L ++G Q D +R E G V +YVDDL++A EV +++ +G L+Y +T +RPDI V +EN +D+ KR+ RYL + D + GK+ E FV ADWA D DRKST+GY+F+L GT++W SRKQ V SS EAEY+AA A KE ++LR LL + G T E N+ I+L + RTKHI VR+H
Sbjct: 833 SLNEHQTWELTD---LPPGKKAITCKWVFKAKLDSEGQVHTYKARLVARGFSQRYGEDYDETFAPVVKHETIRILLLVAAHKGLHVRHLDVKSAYLNGKLEEEIFLEQPPGFQKRGHESKVLRLLKSLYGLKQSARAWNKRANEALAQLGFQSKNADQCLYTRKEKGNNTTYVLLYVDDLLVAGTSAEVTQKVSKDLQRHFNIKDLGNVNHYLGIQIEREADGSFLLSQKGKISKMLEEYGLLEPKPMATPMETGFLSSEADDSIKLPNNSQYRKAIGSLLYIATVSRPDIALAVGILCRCVENPTERDWKAVKRVMRYLASTIDKKLQLSSFGKTE---LECFVDADWAGDKTDRKSTSGYVFRLGNGTVAWSSRKQTTVAMSSTEAEYIAASYASKELLWLRQLLKDMNIPAEGPTIINEDNQGCIHLIESDRCEARTKHIHVRYH 1274
BLAST of mRNA_H-paniculata_contig17991.4338.1 vs. uniprot
Match: A0A2N9G4M2_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9G4M2_FAGSY) HSP 1 Score: 218 bits (554), Expect = 6.570e-60 Identity = 133/367 (36.24%), Postives = 201/367 (54.77%), Query Frame = 1
Query: 7 ALVENGTWESKDPGRLPAGRKKIRTKWIFKRK-LNEDGNVARYKARLVAQGFSQVEGEDFFETGAPVARLSTLRTVFSLATEQDFELESMDVNAAYLNAPVEETLFVQLPPDLN------------------------WNNTLDDFLVEIGLQRSIIDHAYTSRDEMGKTGLLVAVYVDDLVIASHRK-EVDEFKGMVGPLMYASTGTRPDITYEVNQAACRMENQCRKDFSTCKRIFRYLTTVPDPGIMFGGKSNGHGQEGFVGADWAEDVKDRKSTTGYIFKLNGGTISWCSRKQKLVTWSSKEAEYVAAGEARKEAIYLRGLLGSIGFGCRGSTTKFEGNESAINLSKGTGAHCRTKHIGVRWH 1029
+L +N TWE + LP G+K I KW+FK+K + R+KARLVA+G+SQ G D+ E +PV R +++R V +L +QD ELE +DV A+L+ +EE +F++ P W D ++++IG R D R + + + +YVDD++IA+ E E + G L ++G RPD+ + V+ + M N R+ ++ K IFRYL + GI+F + + G+V AD+A +V DR+STTGY+F L+GG I W S Q +V S+ EAEY+A EA KEA++L+GL+ +G +G ++SAI L+K H RTKHI VR+H
Sbjct: 708 SLSKNKTWELTE---LPKGKKPIGCKWVFKKKEAVSEKEGERFKARLVAKGYSQRHGIDYDEVFSPVVRHTSIRAVLALVADQDLELEQLDVKTAFLHGNLEEEIFMEQPEGFKQPGTENLVCRLKKSLYGLKQSPRQWYKRFDSYMIQIGYTRCEYDCCVYVRILEDGSYIFLLLYVDDMLIAAKSMCERTEGQESCGCLRKTTSG-RPDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWLKGLVKELGLN-QGGVQMHCDSQSAIYLAKNQVYHARTKHIDVRFH 1069
BLAST of mRNA_H-paniculata_contig17991.4338.1 vs. uniprot
Match: X1WUQ9_ACYPI (Integrase catalytic domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=X1WUQ9_ACYPI) HSP 1 Score: 215 bits (547), Expect = 3.720e-59 Identity = 132/402 (32.84%), Postives = 212/402 (52.74%), Query Frame = 1
Query: 7 ALVENGTWESKDPGRLPAGRKKIRTKWIFKRKLNEDGNVARYKARLVAQGFSQVEGEDFFETGAPVARLSTLRTVFSLATEQDFELESMDVNAAYLNAPVEETLFVQLPPDLN----------------------WNNTLDDFLVEIGLQRSIIDHAYTSRDE----------------MGKTGLLVAVYVDDL---------------------VIASHRKEVDE-FKGMVGPLMYASTGTRPDITYEVNQAACRMENQCRK-DFSTCKRIFRYLTTVPDPGIMFGGKSNGHGQEGFVGADWAEDVKDRKSTTGYIFKLNGGTISWCSRKQKLVTWSSKEAEYVAAGEARKEAIYLRGLLGSIGFGCRGSTTKFEGNESAINLSKGTGAHCRTKHIGVRWH 1029
+L +N TW LP GRK + TKW+FK K + G+V +YKARLVAQGFSQ EG D+++T +PVA+L+TLRT+ ++A ++++ L+ +DV A+L + E ++++ P LN W+ D+++ ++ + +S + + D +GK + Y++D+ + +++E ++ ++ +VG LMYA G+RPD++Y +N CR +++ K ++ KR+ RY+ + G+ F +SN GFV ADWA DRKSTTGY+FK+ +SW +++Q V SS EAEY+A A EAI++R LL + G FE N+ AI+LS H R+KHI + H
Sbjct: 543 SLKKNNTWTL---SHLPKGRKVVGTKWVFKIKRDSIGSVKKYKARLVAQGFSQKEGVDYYDTYSPVAKLTTLRTLLAIAVQRNWFLQQLDVKTAFLYGILTEDIYIEQPEGLNYNSDMILKLNKSLYGLKQASKCWHERFDNYIAKLEI-KSYLKEEFEMEDNGDLNYFLGLKINYDKTVGKLYINQTQYLEDVLKKFNMDNCNTISTPIESKLNIQEDNKQECNQPYRQLVGSLMYAMLGSRPDLSYALN-FFCRYQSKPNKCHWNHLKRVLRYVKGTLNNGLCFHRQSNSTELIGFVDADWASSTIDRKSTTGYLFKVFNCLVSWSTKRQPTVALSSTEAEYMAVSNATCEAIWIRKLLKDLDVTICGPVILFEDNQGAIHLSSSQELHKRSKHIDTKHH 939
BLAST of mRNA_H-paniculata_contig17991.4338.1 vs. uniprot
Match: J9KJ72_ACYPI (Integrase catalytic domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9KJ72_ACYPI) HSP 1 Score: 212 bits (539), Expect = 9.190e-58 Identity = 141/446 (31.61%), Postives = 214/446 (47.98%), Query Frame = 1
Query: 7 ALVENGTWESKDPGRLPAGRKKIRTKWIFKRKLNEDGNVARYKARLVAQGFSQVEGEDFFETGAPVARLSTLRTVFSLATEQDFELESMDVNAAYLNAPVEETLFVQLPPDLN----------------------WNNTLDDFLVEIGLQRSIIDHA-YTSRDEMGKTGLLVAVYVDDLVIA-----------SHRKEVDE--------------------------------------------------------------------FKGMVGPLMYASTGTRPDITYEVNQAACRME---NQCRKDFSTCKRIFRYLTTVPDPGIMFGGKSNGHGQEGFVGADWAEDVKDRKSTTGYIFKLNGGTISWCSRKQKLVTWSSKEAEYVAAGEARKEAIYLRGLLGSIGFGCRGSTTKFEGNESAINLSKGTGAHCRTKHIGVRWH 1029
+L +N TW LP GRK + TKW+FK K + G+V +YKARLVAQGFSQ EG D+++T +PVA+L+TLRT+ ++A ++++ L+ +DV A+L + E ++++ P LN W+ D+++ ++GL++S D Y + + + +YVDD++IA S+ KE E ++ +VG LMYA G+RPD++Y +N CR + N+C ++ KR+ RY+ + G+ F +SN GFV ADWA DRKSTTGY+FK+ +SW +++Q V SS EAEY+A A EAI++R LL + G FE N+ AI+LS H R+KHI + H
Sbjct: 796 SLKKNNTWTL---SHLPKGRKVVGTKWVFKIKRDSIGSVKKYKARLVAQGFSQKEGVDYYDTYSPVAKLTTLRTLLAIAVQRNWFLQQLDVKTAFLYGILTEDIYIEQPEGLNYNSDMIFKLNKSLYGLKQASKCWHERFDNYIAKLGLEQSDSDQCLYILNNNNTHDIIYLLLYVDDIIIAGSNMLKIGEIKSYLKEEFEMEDNGDLNYFLGLKINYDKTVGKLYINQTQYLEDVLKKFNMDNCNTISTPIESKLNIEEDNKQECNQPYRQLVGSLMYAMLGSRPDLSYALN-FFCRYQSKPNECH--WNHLKRVLRYVKGTLNNGLCFHRQSNSTELIGFVDADWASSTIDRKSTTGYLFKVFNCLVSWSTKRQPTVALSSTEAEYMAVSNATCEAIWIRKLLKDLDVTICGPVILFEDNQGAIHLSSSQELHKRSKHIDTKHH 1235
BLAST of mRNA_H-paniculata_contig17991.4338.1 vs. uniprot
Match: A0A0J7KDE2_LASNI (Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KDE2_LASNI) HSP 1 Score: 212 bits (539), Expect = 9.210e-58 Identity = 134/368 (36.41%), Postives = 200/368 (54.35%), Query Frame = 1
Query: 7 ALVENGTWESKDPGRLP--AGRKKIRTKWIFKRKLNEDGNVARYKARLVAQGFSQVEGEDFFETGAPVARLSTLRTVFSLATEQDFELESMDVNAAYLNAPVEETLFVQLPPDLNWNNTLDD---FLVE----IGLQRS---------IIDHAYTSR-----DEMGKTGLLVAVYVDDLV--IASHRKEVDE--FKGMVGPLMYASTGTRPDITYEVNQAACRMENQCRKDFSTCKRIFRYLTTVPDPGIMFGGKSNGHGQEGFVGADWAEDVKDRKSTTGYIFKLNGGTISWCSRKQKLVTWSSKEAEYVAAGEARKEAIYLRGLLGSIGFGCRGSTTKFEGNESAINLSKGTGAHCRTKHIGVRWH 1029
A +N TW+ +P +G K I +KW+FK +EDG++ R+KARL A+GF Q G D+ ET +PV R +LRT+ ++ T+ D E DV A+L+ + E +++++P LN N + D + E +GLQ S + AYT R GL V L+ + +R EV + ++ VG L++ + +RPDI+Y VN + + N + KRI YL GI + +G GF AD+A D++ R+STTGY F + G +SW S++QKLV+ S+ E+EY+AA A +EAI+LR LL IG C+ +T N+SAI L K H RTKH+ +R+H
Sbjct: 870 AHEKNNTWKL-----VPRVSGTKTIDSKWVFKVIQSEDGSIRRFKARLCARGFQQRRGIDYGETFSPVVRYDSLRTLLAIITQDDLEALQFDVRTAFLHGELSENIWMEVPVGLNINKEVGDRETLVCECSCFVGLQISRDRINKTMFVHQTAYTRRLINNFGMQNAKGLSVPADPHTLLYPVTENRTEVCKIPYREAVGSLIFLAVVSRPDISYAVNNVSKFLNNHDTSHWQAVKRIIAYLVNTIGYGIEYRRNESGCELIGFSDADFASDIETRRSTTGYAFLIANGLVSWSSQRQKLVSLSTTESEYIAASSATREAIWLRNLLHDIGHKCKNATLIHIDNQSAIRLVKNPEFHKRTKHVDIRYH 1232
BLAST of mRNA_H-paniculata_contig17991.4338.1 vs. uniprot
Match: J9M5U1_ACYPI (Uncharacterized protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9M5U1_ACYPI) HSP 1 Score: 211 bits (537), Expect = 1.900e-57 Identity = 141/446 (31.61%), Postives = 213/446 (47.76%), Query Frame = 1
Query: 7 ALVENGTWESKDPGRLPAGRKKIRTKWIFKRKLNEDGNVARYKARLVAQGFSQVEGEDFFETGAPVARLSTLRTVFSLATEQDFELESMDVNAAYLNAPVEETLFVQLPPDLN----------------------WNNTLDDFLVEIGLQRSIIDHA-YTSRDEMGKTGLLVAVYVDDLVIA-----------SHRKEVDE--------------------------------------------------------------------FKGMVGPLMYASTGTRPDITYEVNQAACRME---NQCRKDFSTCKRIFRYLTTVPDPGIMFGGKSNGHGQEGFVGADWAEDVKDRKSTTGYIFKLNGGTISWCSRKQKLVTWSSKEAEYVAAGEARKEAIYLRGLLGSIGFGCRGSTTKFEGNESAINLSKGTGAHCRTKHIGVRWH 1029
+L +N TW LP GRK + TKW+FK K + G+V +YKARLVAQGFSQ EG D+++T +PVA+L+TLRT+ ++A ++++ L+ +DV A+L + E ++++ P LN W+ D+++ ++GL++S D Y + + + +YVDD++IA S+ KE E ++ +VG LMYA G+RPD++Y +N CR + N+C ++ KR+ RY + G+ F +SN GFV ADWA DRKSTTGY+FK+ +SW +++Q V SS EAEY+A A EAI++R LL + G FE N+ AI+LS H R+KHI + H
Sbjct: 1505 SLKKNNTWTL---SHLPKGRKVVGTKWVFKIKRDSIGSVKKYKARLVAQGFSQKEGVDYYDTYSPVAKLTTLRTLLAIAVQRNWFLQQLDVKTAFLYGILTEDIYIEQPEGLNYNSDMILKLNKSLYGLKQASKCWHERFDNYIAKLGLKQSDSDQCLYILNNNNTHDIIYLLLYVDDIIIAGSNMLKIGEIKSYLKEEFEMEDNGDLNYFLGLKINYDKTVGKLYINQTQYLEDVLKKFNMDNCNTISTPIESKLNIEEDNKQECNQPYRQLVGSLMYAMLGSRPDLSYALN-FFCRYQSKPNECH--WNHLKRVLRYFKGTLNNGLCFHRQSNSTELIGFVDADWASSTIDRKSTTGYLFKVFNCLVSWSTKRQPTVALSSTEAEYMAVSNATCEAIWIRKLLKDLDVTICGPVILFEDNQGAIHLSSSQELHKRSKHIDTKHH 1944
BLAST of mRNA_H-paniculata_contig17991.4338.1 vs. uniprot
Match: A0A2K3M4Z2_TRIPR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3M4Z2_TRIPR) HSP 1 Score: 202 bits (514), Expect = 2.110e-57 Identity = 132/404 (32.67%), Postives = 202/404 (50.00%), Query Frame = 1
Query: 1 MGALVENGTWESKDPGRLPAGRKKIRTKWIFKRKLNEDGNVARYKARLVAQGFSQVEGEDFFETGAPVARLSTLRTVFSLATEQDFELESMDVNAAYLNAPVEETLFVQLPPDL------------------------NWNNTLDDFLVEIGLQRSIIDHAYTSRDEMGKTGLLVAVYVDDLVIASHRKEV-DEFK-GMVGPLMYASTGT--------------------RPDITYEVNQAACRMENQCRKDFST-CK-------------RIFRYLTTVPDPGIMFGGKSNGHGQ-EGFVGADWAEDVKDRKSTTGYIFKLNGGTISWCSRKQKLVTWSSKEAEYVAAGEARKEAIYLRGLLGSIGFGCRGSTTKFEGNESAINLSKGTGAHCRTKHIGVRWH 1029
M A+ +N TWE D LP G K I KWIFK KLNE+G V +YKARLVA+G+SQ G D+ E APVAR T+R V +LA ++ + + +DV +A+L+ + E +FV P W + ++ + ++ G ++ +H + G L++++YVDDL+ + + + +EFK M + G R + + + N R + CK ++ RYL D GI++ K NG+ + E + +D+A D+ DRKST+GY+F + G +SW S+KQ +VT S+ EAE++AA + I++R +L +G GSTT + N SAI LSK H R+KHI VR+H
Sbjct: 28 MEAIEKNNTWELTD---LPTGAKTIGLKWIFKTKLNENGEVEKYKARLVAKGYSQQYGVDYTEVFAPVARWDTIRMVIALAAQKGWSVYQLDVKSAFLHGELNEAVFVDQPQGYVKKGDTVKVYRLKKALYGLKQAPRAWYSRIEAYFIKEGFEKCPYEHTLFVKLSEGGNILIISLYVDDLIFTGNDENMFEEFKKSMENEFNMSDLGKMHYFLGVEVIQNEKGIYICQRKYVRELLERFGMEKSNLSRNPIAPGCKLVKDEEGVKVDATKVLRYLNGTIDLGILY--KRNGNEKLEAYTDSDYAGDLDDRKSTSGYVFMFSSGAVSWSSKKQPVVTLSTTEAEFIAAASCACQGIWMRRILEKLGHTQLGSTTVYCDNSSAIKLSKNPVLHGRSKHIDVRFH 426 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17991.4338.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig17991.4338.1 >prot_H-paniculata_contig17991.4338.1 ID=prot_H-paniculata_contig17991.4338.1|Name=mRNA_H-paniculata_contig17991.4338.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=346bp MGALVENGTWESKDPGRLPAGRKKIRTKWIFKRKLNEDGNVARYKARLVAback to top mRNA from alignment at H-paniculata_contig17991:648..2077- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig17991.4338.1 ID=mRNA_H-paniculata_contig17991.4338.1|Name=mRNA_H-paniculata_contig17991.4338.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1430bp|location=Sequence derived from alignment at H-paniculata_contig17991:648..2077- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig17991:648..2077- >mRNA_H-paniculata_contig17991.4338.1 ID=mRNA_H-paniculata_contig17991.4338.1|Name=mRNA_H-paniculata_contig17991.4338.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2076bp|location=Sequence derived from alignment at H-paniculata_contig17991:648..2077- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |