prot_H-paniculata_contig1799.4337.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig1799.4337.1
Unique Name	prot_H-paniculata_contig1799.4337.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	206

Homology

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BLAST of mRNA_H-paniculata_contig1799.4337.1 vs. uniprot
Match: D7G0A4_ECTSI (Rab8A, RAB family GTPase n=2 Tax=Phaeophyceae TaxID=2870 RepID=D7G0A4_ECTSI)

HSP 1 Score: 395 bits (1015), Expect = 6.260e-139
Identity = 197/205 (96.10%), Postives = 201/205 (98.05%), Query Frame = 0

Query:    1 MARNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVGQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDVNVEKGFITIAREVKDRLMADGPNQGARVAGNVNLNAQASKKKAGCC 205
            M+RN+SPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWV QIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKND+NVEKGFITIAREVKDRLMADGPN G+R AGNVNLNAQASKKK GCC
Sbjct:    1 MSRNESPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNPGSRAAGNVNLNAQASKKKTGCC 205

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BLAST of mRNA_H-paniculata_contig1799.4337.1 vs. uniprot
Match: A0A836CCB2_9STRA (Rab8A, rab family GTPase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCB2_9STRA)

HSP 1 Score: 351 bits (901), Expect = 1.540e-121
Identity = 177/206 (85.92%), Postives = 191/206 (92.72%), Query Frame = 0

Query:    1 MARNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVGQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDVNVEKGFITIAREVKDRLMADGPNQGARVAGNVNLNAQASK-KKAGCC 205
            MAR++SPFDMQIKLLMIGDSGVGKTCLLLRYA+D FSQTFITTIGIDFKIKNI+LD+KR+KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSF SIRNWV QIQQHADV VNKILIGNKCD+D +REVS EEGAQLAAEYGIQFFETSAKND+NVEKGFIT+AREVK+RLMADG +QGAR  GNV L+A A   KK+ CC
Sbjct:    1 MARHESPFDMQIKLLMIGDSGVGKTCLLLRYASDHFSQTFITTIGIDFKIKNIELDTKRVKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQSIRNWVAQIQQHADVHVNKILIGNKCDIDNEREVSTEEGAQLAAEYGIQFFETSAKNDINVEKGFITVAREVKNRLMADGGSQGARTQGNVALSAPAKGGKKSSCC 206

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BLAST of mRNA_H-paniculata_contig1799.4337.1 vs. uniprot
Match: A0A6H5KYQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYQ5_9PHAE)

HSP 1 Score: 321 bits (823), Expect = 3.870e-110
Identity = 160/167 (95.81%), Postives = 164/167 (98.20%), Query Frame = 0

Query:   39 TFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVGQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDVNVEKGFITIAREVKDRLMADGPNQGARVAGNVNLNAQASKKKAGCC 205
            TFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSF+SIRNWV QIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKND+NVEKGFITIAREVKDRLMADGPN G+R +GNVNLNAQASKKKAGCC
Sbjct:    8 TFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFSSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNPGSRASGNVNLNAQASKKKAGCC 174

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BLAST of mRNA_H-paniculata_contig1799.4337.1 vs. uniprot
Match: K3WPX9_GLOUD (Uncharacterized protein n=28 Tax=Oomycota TaxID=4762 RepID=K3WPX9_GLOUD)

HSP 1 Score: 321 bits (822), Expect = 1.460e-109
Identity = 161/205 (78.54%), Postives = 180/205 (87.80%), Query Frame = 0

Query:    1 MARNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVGQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDVNVEKGFITIAREVKDRLMADGPNQGARVAGNVNLNAQASKKKAGCC 205
            MAR+++PFDMQIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFKIKNI+LD+K++KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SF SIRNWVGQIQQHADV VNKILIGNKCDM +D+ VS EEG  LA EYG++FFETSAKN++NVE GFI IAREVK+RLM +G   G     NVNL+A+ +  K GCC
Sbjct:    1 MARHENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDNKKVKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFQSIRNWVGQIQQHADVHVNKILIGNKCDMTDDKVVSTEEGQALADEYGVKFFETSAKNNINVESGFIEIAREVKNRLMEEG---GPHKKENVNLSAKPAAPKKGCC 202

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BLAST of mRNA_H-paniculata_contig1799.4337.1 vs. uniprot
Match: A0A4D9D279_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D279_9STRA)

HSP 1 Score: 311 bits (798), Expect = 6.830e-106
Identity = 158/206 (76.70%), Postives = 176/206 (85.44%), Query Frame = 0

Query:    1 MARNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVGQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDVNVEKGFITIAREVKDRLMADGPNQGARVAGNVNL-NAQASKKKAGCC 205
            MAR ++PFDMQIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFKIKN++LD +RIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD++SF SIRNWVGQIQQHADV VNKILIGNKCDM   R VS EEG  LA ++GIQFFETSAKND+NVEK F+TIAREVK+R++ DG   G R  G   + +A+ S +   CC
Sbjct:    1 MARQENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGRRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVSTEEGQSLANDFGIQFFETSAKNDINVEKSFVTIAREVKNRMLVDG---GPRATGGKAIVDAKRSNEAKKCC 203

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BLAST of mRNA_H-paniculata_contig1799.4337.1 vs. uniprot
Match: A0A024TZG5_9STRA (Uncharacterized protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TZG5_9STRA)

HSP 1 Score: 311 bits (796), Expect = 1.820e-105
Identity = 159/211 (75.36%), Postives = 177/211 (83.89%), Query Frame = 0

Query:    1 MARNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVGQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDVNVEKGFITIAREVKDRLMADG-PNQGARVAGNVNLNAQASKK-----KAGCC 205
            MARN++PFDMQIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFK+KNIDLD K+IKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SFNSIRNWVGQIQQHADV VNKIL+GNKCDM +D+ VS EEG  LA EYG++FFETSAKN++NVE GFI IA EVK RLM +G P++ + +  N+        K     K GCC
Sbjct:    1 MARNENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKVKNIDLDGKKIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFNSIRNWVGQIQQHADVHVNKILVGNKCDMLDDKVVSTEEGQALADEYGVKFFETSAKNNINVEGGFIEIANEVKTRLMEEGGPHKKSDLVVNLGKKGNDPTKASNGGKGGCC 211

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BLAST of mRNA_H-paniculata_contig1799.4337.1 vs. uniprot
Match: A0A7S4M6F2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M6F2_9STRA)

HSP 1 Score: 309 bits (791), Expect = 8.820e-105
Identity = 154/206 (74.76%), Postives = 178/206 (86.41%), Query Frame = 0

Query:    1 MARNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVGQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDVNVEKGFITIAREVKDRLMADGPNQGARVAG-NVNLNAQASKKKAGCC 205
            M++  +P+DMQIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFKIKN+D+D KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD++SF SIRNWV QIQQHADV VNKIL+GNKCDM +++ VS EEGA+LA E+GI+F+E SAKND+NVE+ FI IAR+VKDRL+ADG    A   G ++N   Q S++  GCC
Sbjct:    1 MSQQSAPYDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNVDIDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVSQIQQHADVHVNKILVGNKCDMLDEKVVSTEEGAKLAKEFGIEFWECSAKNDINVEQAFIGIARDVKDRLVADGGGGPAANKGLSLNKPGQGSQRNRGCC 206

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BLAST of mRNA_H-paniculata_contig1799.4337.1 vs. uniprot
Match: A0A7S2V1J6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1J6_9STRA)

HSP 1 Score: 305 bits (782), Expect = 1.410e-103
Identity = 157/196 (80.10%), Postives = 166/196 (84.69%), Query Frame = 0

Query:   10 MQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVGQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDVNVEKGFITIAREVKDRLMADGPNQGARVAGNVNLNAQASKKKAGCC 205
            MQIKLLMIGDSGVGKTCLLLRYAN SFSQTFITTIGIDFKIK IDLD KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+KSFNSIRNW+ QIQQHADV VNKIL GNKCDM E+R V+ EEG +LA+EYGI FFE SAKNDVNVE  F+TIAREVKDRL+ D     AR    VNL      KK+GCC
Sbjct:    1 MQIKLLMIGDSGVGKTCLLLRYANSSFSQTFITTIGIDFKIKTIDLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRKSFNSIRNWISQIQQHADVHVNKILCGNKCDMSEERAVTTEEGQKLASEYGIGFFEASAKNDVNVETSFVTIAREVKDRLLLDVGTM-ARGGERVNLGNAKPAKKSGCC 195

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BLAST of mRNA_H-paniculata_contig1799.4337.1 vs. uniprot
Match: A0A6T5Q365_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5Q365_HETAK)

HSP 1 Score: 305 bits (782), Expect = 2.070e-103
Identity = 155/202 (76.73%), Postives = 173/202 (85.64%), Query Frame = 0

Query:    1 MARNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVGQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDVNVEKGFITIAREVKDRLMADGPNQGARVAGNVNLNAQASKKKA 202
            MAR+++ +DMQIKLLMIGDSGVGKTCLLLRYAN +FSQTFITTIGIDFKIKNI LD KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SFNSIRNWV QIQQHADV VNKILIGNKCDM ++R V+ EEG +LAAEYGIQFFETSAKND+ VE+ F+T+AREVK+RL+ D      +    VNL  Q S  K+
Sbjct:    1 MARHENAYDMQIKLLMIGDSGVGKTCLLLRYANAAFSQTFITTIGIDFKIKNITLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRNSFNSIRNWVSQIQQHADVHVNKILIGNKCDMKDERVVTTEEGQKLAAEYGIQFFETSAKNDIQVEESFVTVAREVKERLINDVDR---KTDARVNLQTQKSSSKS 199

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BLAST of mRNA_H-paniculata_contig1799.4337.1 vs. uniprot
Match: W7TKL6_9STRA (Rab gtpase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKL6_9STRA)

HSP 1 Score: 308 bits (789), Expect = 3.710e-103
Identity = 157/205 (76.59%), Postives = 175/205 (85.37%), Query Frame = 0

Query:    1 MARNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVGQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDVNVEKGFITIAREVKDRLMADGPNQGARVAGNVNL-NAQASKKKAGC 204
            MAR ++PFDMQIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFKIKN++LD +RIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD++SF SIRNWVGQIQQHADV VNKILIGNKCDM   R VS EEG  LA ++GIQFFETSAKND+NVEK F+TIAREVK+R++ DG   G R  G   + +A+ S +   C
Sbjct:    1 MARQENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGRRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVSTEEGQSLANDFGIQFFETSAKNDINVEKSFVTIAREVKNRMLVDG---GPRATGGKAIVDAKRSNEAKKC 202

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig1799.4337.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig1799.4337.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G0A4_ECTSI	6.260e-139	96.10	Rab8A, RAB family GTPase n=2 Tax=Phaeophyceae TaxI...	[more]
A0A836CCB2_9STRA	1.540e-121	85.92	Rab8A, rab family GTPase n=2 Tax=Tribonema minus T...	[more]
A0A6H5KYQ5_9PHAE	3.870e-110	95.81	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
K3WPX9_GLOUD	1.460e-109	78.54	Uncharacterized protein n=28 Tax=Oomycota TaxID=47...	[more]
A0A4D9D279_9STRA	6.830e-106	76.70	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
A0A024TZG5_9STRA	1.820e-105	75.36	Uncharacterized protein n=7 Tax=Saprolegniaceae Ta...	[more]
A0A7S4M6F2_9STRA	8.820e-105	74.76	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]
A0A7S2V1J6_9STRA	1.410e-103	80.10	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A6T5Q365_HETAK	2.070e-103	76.73	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
W7TKL6_9STRA	3.710e-103	76.59	Rab gtpase n=1 Tax=Nannochloropsis gaditana TaxID=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 53..75 score: 54.58 coord: 12..33 score: 50.82 coord: 150..172 score: 42.76 coord: 35..51 score: 33.09 coord: 115..128 score: 43.7
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 14..175 e-value: 6.6E-12 score: 32.7
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 12..175 e-value: 7.2E-96 score: 334.5
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 13..175 e-value: 1.4E-37 score: 140.8
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..176 e-value: 0.0035 score: 1.1
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 17..201 e-value: 1.3E-5 score: 30.2
None	No IPR available	GENE3D	3.40.50.300		coord: 6..205 e-value: 6.4E-69 score: 233.3
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 1..183
None	No IPR available	PANTHER	PTHR24073:SF978		coord: 1..183
None	No IPR available	PROSITE	PS51419	RAB	coord: 7..205 score: 35.358
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 13..173 e-value: 7.0E-65 score: 217.6
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 11..166 e-value: 1.1E-27 score: 94.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..176

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig1799	contig	H-paniculata_contig1799:8796..14016 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig1799.4337.1	mRNA_H-paniculata_contig1799.4337.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig1799 7628..14123 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig1799.4337.1 ID=prot_H-paniculata_contig1799.4337.1|Name=mRNA_H-paniculata_contig1799.4337.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=206bp
MARNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKI
KNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFN
SIRNWVGQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQF
FETSAKNDVNVEKGFITIAREVKDRLMADGPNQGARVAGNVNLNAQASKK
KAGCC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase