mRNA_H-paniculata_contig1798.4331.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1798.4331.1 vs. uniprot
Match: D7G3S9_ECTSI (Long chain acyl-coA synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S9_ECTSI) HSP 1 Score: 362 bits (929), Expect = 1.490e-123 Identity = 186/275 (67.64%), Postives = 211/275 (76.73%), Query Frame = 1
Query: 1 MNEFGGGGGAPCGFAFANALAFSKVKANLGLDKATAVYTGAAPISKEVSFVIYMCLLSQVPNLSYCNVVVCTSIPPYKCLLRSMRGVYMYAPEKTAETIDEDGWMHSGDVATFDNDEDPRVKSPSGFMHITGRIKELIITAGGENVPPVLIENEFKKELPSISNCMVIGDKRKFLSIIIALRVELTGDAVQACKQIGSAAKTVAEAISDPKWTEYIDAAMKACNARTTSNAQRVAKWALIPTDFSVDGGELTPTLKLKRGPAATKYSTIIEGFYA 825
M+++G GGGAPCGF ANALAFSKVKANLGLD+AT+ +TGAAPIS E + +P ++ PEKTAETIDEDGWMHSGDVATFD D DPR++ PSGFM ITGRIKELIITAGGENVPPVLIENEFK ELP I+NCMVIGDKRKFL+I+IALR EL GD++ AC++IGSAA T+ A +D KWTEYID AMKACNARTTSNAQRVAKWA +P DFSV+GGELTPTLKLKRGPA+ KY+ IIEG YA
Sbjct: 1 MHQYGAGGGAPCGFGVANALAFSKVKANLGLDQATSCFTGAAPISVEYVHKLCSPSFRMLPEITQRRYTYNRXXXXXXXXXXXXXXXXXXXPEKTAETIDEDGWMHSGDVATFDEDGDPRIEGPSGFMRITGRIKELIITAGGENVPPVLIENEFKTELPCIANCMVIGDKRKFLTILIALRSELAGDSLTACEKIGSAAITIEGAKADTKWTEYIDKAMKACNARTTSNAQRVAKWAFLPHDFSVEGGELTPTLKLKRGPASEKYADIIEGLYA 275
BLAST of mRNA_H-paniculata_contig1798.4331.1 vs. uniprot
Match: A0A6H5KWQ0_9PHAE (AMP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ0_9PHAE) HSP 1 Score: 347 bits (890), Expect = 1.710e-112 Identity = 192/314 (61.15%), Postives = 218/314 (69.43%), Query Frame = 1
Query: 1 MNEFGGGGGAPCGFAFANALAFSKVKANLGLDKATAVYTGAAPISKEVSFVIYMCLLSQVPNLSYCNVVVCTSIPPYKCLL--------RSMRGV---------------------YMYAPEKTAETIDEDGWMHSGDVATFDNDEDPRVKSPSGFMHITGRIKELIITAGGENVPPVLIENEFKKELPSISNCMVIGDKRKFLSIIIALRVE----------LTGDAVQACKQIGSAAKTVAEAISDPKWTEYIDAAMKACNARTTSNAQRVAKWALIPTDFSVDGGELTPTLKLKRGPAATKYSTIIEGFYA 825
M ++G GGG PCGF ANALAFSKVKANLGLD+AT +TGAAPI+ E+ + Y L+ + L CT + R M G YM+ PEKTAETIDEDGWMHSGDVATFD D D R + PSGFM ITGRIKELIITAGGENVPPVLIENEFK ELP I+NCMV+GDKRKFLSI+IALR E L GD++ AC++IGS A T+ EA +DPKWTEYID A+KACN RTTSNAQRVAKWAL+P DFSV+GGELTPTLKLKRGPA+ KY+ IIEG YA
Sbjct: 347 MQQYGAGGGVPCGFGVANALAFSKVKANLGLDQATCCFTGAAPIAVEI--IEYFASLN-IHILELFGQSECTGPQTFNTAEAWKIGTCGRPMAGTESKLVPETGELCYRGRHIFMGYMHNPEKTAETIDEDGWMHSGDVATFDEDGDDRTEGPSGFMQITGRIKELIITAGGENVPPVLIENEFKTELPCIANCMVVGDKRKFLSILIALRSEVAEDGTPTSKLAGDSLTACEKIGSTATTIEEAKADPKWTEYIDKAVKACNNRTTSNAQRVAKWALLPHDFSVEGGELTPTLKLKRGPASEKYADIIEGLYA 657
BLAST of mRNA_H-paniculata_contig1798.4331.1 vs. uniprot
Match: D7G3T1_ECTSI (Long chain acyl-coA synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T1_ECTSI) HSP 1 Score: 324 bits (831), Expect = 1.250e-103 Identity = 182/312 (58.33%), Postives = 210/312 (67.31%), Query Frame = 1
Query: 7 EFGGGGGAPCGFAFANALAFSKVKANLGLDKATAVYTGAAPISKEVS--FVIYMCLLSQVPNLSYCNVVVCTSI---------------------PPYKCLLRSMRGV---YMYAPEKTAETIDEDGWMHSGDVATFDNDEDPRVKSPSGFMHITGRIKELIITAGGENVPPVLIENEFKKELPSISNCMVIGDKRKFLSIIIALR-------------VELTGDAVQACKQIGSAAKTVAEAISDPKWTEYIDAAMKACNARTTSNAQRVAKWALIPTDFSVDGGELTPTLKLKRGPAATKYSTIIEGFYA 825
E+ GGGG P GF ANAL FSKVK LGLDKA +T AAPI++E F + +V S C + S P L R + YM+ PEKTAETIDEDGWMHSGDVATFD D DPR++ PSGF+ ITGRIKELIITAGGEN+PPVLIE+EFK ELP I+NCMVIGDKRKFL+I+IALR V L GD++ AC++IGS A T+ EA +D KWTEYI+ AMKACNARTTSNAQRVAKWA +P DFSV+GGELT TLKL+RGP + KYS IIEG YA
Sbjct: 349 EYSGGGGTPWGFKIANALVFSKVKEKLGLDKANLCFTTAAPIAQETLEYFASLNIHIMEVFGQSECTGPMAVSTKEAWKMGSCGRPMLGTESKLEPGTGELCYRGRNIFMGYMHNPEKTAETIDEDGWMHSGDVATFDEDGDPRIEGPSGFVRITGRIKELIITAGGENIPPVLIESEFKAELPCIANCMVIGDKRKFLTILIALRSEKREDENGGSSTVRLVGDSLTACEKIGSTATTIEEAKADTKWTEYINKAMKACNARTTSNAQRVAKWAFLPHDFSVEGGELTETLKLRRGPTSEKYSDIIEGLYA 660
BLAST of mRNA_H-paniculata_contig1798.4331.1 vs. uniprot
Match: A0A6H5K7V3_9PHAE (AMP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7V3_9PHAE) HSP 1 Score: 281 bits (720), Expect = 6.170e-90 Identity = 146/228 (64.04%), Postives = 166/228 (72.81%), Query Frame = 1
Query: 262 YMYAPEKTAETIDEDGWMHSGDVATFDNDEDPRVKSPSGFMHITGRIKELIITAGGENVPPVLIENEFKKELPSISNCMVIGDKRKFLSIIIALR-------------VELTGDAVQACKQIGSAAKTVAEAISDPK---------------------------WTEYIDAAMKACNARTTSNAQRVAKWALIPTDFSVDGGELTPTLKLKRGPAATKYSTIIEGFYA 825
YM+ PEKTAETIDEDGWMHSGDVATFD D DPR+ PSGF+ ITGRIKELIITAGGENVPPVLIE+EFK ELP I+NCMV+GDKRKFL+I+IALR V L GD++ AC++IGS A T+ EA +DPK WTEYI+ AMKACNARTTSNAQRVAKWAL+P DFSV+GGELT TLKL+RGP + KY+ IIEG YA
Sbjct: 185 YMHNPEKTAETIDEDGWMHSGDVATFDEDGDPRITGPSGFVRITGRIKELIITAGGENVPPVLIESEFKAELPCIANCMVVGDKRKFLTILIALRSEKREDKNGGSSTVRLIGDSLTACEEIGSTATTIEEAKADPKVNRGNHRQTTTHKTRIILFVLFFCFCQWTEYINKAMKACNARTTSNAQRVAKWALLPKDFSVEGGELTETLKLRRGPTSEKYTDIIEGLYA 412
BLAST of mRNA_H-paniculata_contig1798.4331.1 vs. uniprot
Match: A0A835Z6J1_9STRA (Long chain acyl-CoA synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6J1_9STRA) HSP 1 Score: 275 bits (702), Expect = 1.810e-84 Identity = 160/314 (50.96%), Postives = 196/314 (62.42%), Query Frame = 1
Query: 1 MNEFGGGGGAPCGFAFANALAFSKVKANLGLDKATAVYTGAAPISKEVSFVIYMCLLSQVPNLSYCNVVVCTSI----PPYKCLL----RSMRGV---------------------YMYAPEKTAETIDEDGWMHSGDVATFDNDEDPRVKSPSGFMHITGRIKELIITAGGENVPPVLIENEFKKELPSISNCMVIGDKRKFLSIIIALRVELT-----------GDAVQACKQIGSAAKTVAEAISDPKWTEYIDAAMKACNARTTSNAQRVAKWALIPTDFSVDGGELTPTLKLKRGPAATKYSTIIEGFY 822
M ++GGGGG PCG+ AN + F+KVK NLGLD+A ++ AAPIS E+ + Y L +P CT P L+ R MRG YM+ PEKTAETIDE+GW+HSGDVATFD++ + +PSGFM ITGRIKELIITAGGENV PVLIENEFKK LPS+SNCMV+GDKRK+L+I+++L+ EL G A++ K IGS A TV EA + PKW E+I+AA N S AQ + KWAL+P DFS GGELTPTLKLKRGP A K+ II+ Y
Sbjct: 344 MCQYGGGGGEPCGYNVANKVVFTKVKENLGLDQAKGCFSAAAPISTEI--LEYFGSL-DLPIYEVFGQSECTGPHTINDPEGWLIGTCGRPMRGTENKIVADTGELCYRGRHIFMGYMHDPEKTAETIDEEGWLHSGDVATFDDNNRTDMPAPSGFMRITGRIKELIITAGGENVAPVLIENEFKKALPSLSNCMVVGDKRKYLTILLSLKTELNEAEGIPTDKLAGTALETSKAIGSEATTVPEAATCPKWREHIEAARSKVNEEAPSRAQVIQKWALLPMDFSEKGGELTPTLKLKRGPTADKHRDIIDALY 654
BLAST of mRNA_H-paniculata_contig1798.4331.1 vs. uniprot
Match: A0A7S3M9T8_9STRA (Hypothetical protein n=3 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M9T8_9STRA) HSP 1 Score: 257 bits (657), Expect = 6.050e-79 Identity = 145/310 (46.77%), Postives = 192/310 (61.94%), Query Frame = 1
Query: 1 MNEFGGGGGAPCGFAFANALAFSKVKANLGLDKATAVYTGAAPISKE-------VSFVIYM------CLLSQVPNLSYC-NVVVC-TSIPPYKCLLRSMRGV-----------YMYAPEKTAETIDEDGWMHSGDVATFDNDEDPRVKSPSGFMHITGRIKELIITAGGENVPPVLIENEFKKELPSISNCMVIGDKRKFLSIIIALRVELTG----------DAVQACKQIGSAAKTVAEAISDPKWTEYIDAAMKACNARTTSNAQRVAKWALIPTDFSVDGGELTPTLKLKRGPAATKYSTIIEGFY 822
M ++G GGGAPC ++ ANA+ + +K LGLD+A +T AAPIS + + +Y C + +C + C + + +L G YMY P+KTAETID+DG++HSGDVA FDND D + P GFM ITGRIKELIITAGGENVPPVLIENE K + ++SNCMVIGDKRKFL+++++L+VE+ G D++ +QIGSAAKT +EA +DP W +YID +K N++TTSNAQ V KW +P DFS G+LTPTLKLKR K + +I+ Y
Sbjct: 229 MAQYGNGGGAPCCYSAANAIVLTNIKKALGLDQAKGCFTAAAPISTDTLNYFASLDIPVYEVFGQSECTGPHTVSFRHCWKIGTCGRPLKGTESMLAPSTGELCYRGRHIFMGYMYMPDKTAETIDDDGFLHSGDVAEFDNDVDKDIVGPGGFMKITGRIKELIITAGGENVPPVLIENEVKAAMVAVSNCMVIGDKRKFLTLLVSLKVEVDGEARPTDQLAADSLFIGEQIGSAAKTYSEAKADPLWKDYIDKGVKTANSKTTSNAQIVQKWTWLPVDFSEKAGDLTPTLKLKRSVVTEKNAALIDSLY 538
BLAST of mRNA_H-paniculata_contig1798.4331.1 vs. uniprot
Match: A0A482RSC8_9ARCH (AMP-binding domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RSC8_9ARCH) HSP 1 Score: 245 bits (626), Expect = 1.660e-76 Identity = 144/314 (45.86%), Postives = 183/314 (58.28%), Query Frame = 1
Query: 1 MNEFGGGGGAPCGFAFANALAFSKVKANLGLDKATAVYTGAAPISKEVSFVIYMCLLSQVPNLSYCNVVVCT---SIPPYKCLL-----RSMRGV---------------------YMYAPEKTAETIDEDGWMHSGDVATFDNDEDPRVKSPSGFMHITGRIKELIITAGGENVPPVLIENEFKKELPSISNCMVIGDKRKFLSIIIALRV-----------ELTGDAVQACKQIGSAAKTVAEAISDPKWTEYIDAAMKACNARTTSNAQRVAKWALIPTDFSVDGGELTPTLKLKRGPAATKYSTIIEGFY 822
+ +FG G GAP G+ AN+L FSK+K LGLD+A +T AAPI+ E + Y L +P CT ++ K R M G YMY P++T+ETID DG++HSGDVA FD+D DP V PSGFM ITGRIKEL+ITAGGENVPPVLIENE K + ++SN MVIGDK+KFL+++++L+ +L DA+ K+IGS A T +EA DP W +YID K N + SNAQ V KW +P DF GELTPTLKLKR A KY+ +I+ Y
Sbjct: 41 LAQFGKGNGAPFGYGCANSLVFSKIKEVLGLDQAKCCFTAAAPIAPETLW--YFASL-DIPVYEVFGQSECTGPHTVSAAKAWKVGTCGRPMLGTESRIDPNNGELCYRGRHIFMGYMYMPKETSETIDADGYLHSGDVAEFDSDHDPNVPKPSGFMRITGRIKELLITAGGENVPPVLIENEMKAAMLALSNVMVIGDKKKFLTMLVSLKTVVDPESGLPTDQLAADALHEAKRIGSTATTYSEARRDPAWQKYIDDGAKVANKKAASNAQIVQKWTWLPEDFCEKNGELTPTLKLKRNVVAKKYAELIDSMY 351
BLAST of mRNA_H-paniculata_contig1798.4331.1 vs. uniprot
Match: A0A7S2K6B1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K6B1_9STRA) HSP 1 Score: 249 bits (636), Expect = 1.190e-74 Identity = 145/312 (46.47%), Postives = 185/312 (59.29%), Query Frame = 1
Query: 7 EFGGGGGAPCGFAFANALAFSKVKANLGLDKATAVYTGAAPISKEVSFVIYMCLLSQVPNLSYCNVVVCTS------------------IPPYKCLLRSMRGV-----------YMYAPEKTAETIDEDGWMHSGDVATFDNDEDPRVKSPSGFMHITGRIKELIITAGGENVPPVLIENEFKKELPSISNCMVIGDKRKFLSIIIALRVE----------LTGDAVQACKQIGSAAKTVAEAISDPKWTEYIDAAMKACNARTTSNAQRVAKWALIPTDFSVDGGELTPTLKLKRGPAATKYSTIIEGFYA 825
++G GG+P G+ A+ + KV LGL++ +TGAAPI EV + Y + +P CT +P + + G YMY +KTA+TID GW+HSGDV +FD+ P ++ PSGFM ITGRIKELIITAGGENV PVLIE+EFK +P++SNCMVIGDKRKFLSI++ L VE L G+A+ K+IGS+A T AE ++ KW +Y D M N +T S AQRVAKWA++PTDF+ GGELTPTLKLKR A KYS I+EG YA
Sbjct: 357 QYGESGGSPWGYGIASKI-LGKVHVALGLERCLCAFTGAAPI--EVKILNYFASI-DLPIYELFGQSECTGPHTVNFPGAWKVGTCGRPLPGTESRMEPGTGELSYTGRHIFAGYMYMDDKTADTIDSGGWLHSGDVVSFDDCSTPGIEGPSGFMSITGRIKELIITAGGENVAPVLIESEFKLAMPALSNCMVIGDKRKFLSILLCLLVEVDEEGVASDKLAGEALDTSKRIGSSATTTAEVMTCSKWKDYFDKGMAVANDKTISRAQRVAKWAVVPTDFTEKGGELTPTLKLKRSVAEAKYSEIVEGIYA 664
BLAST of mRNA_H-paniculata_contig1798.4331.1 vs. uniprot
Match: A0A7S1D387_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D387_CYCTE) HSP 1 Score: 228 bits (582), Expect = 2.970e-69 Identity = 143/312 (45.83%), Postives = 173/312 (55.45%), Query Frame = 1
Query: 7 EFGGGGGAPCGFAFANALAFSKVKANLGLDKATAVYTGAAPISKEVSFVIYMCLLSQVPNLSYCNVVVCTSI--------------------------PPYKCLLRSMRGV---YMYAPEKTAETIDEDGWMHSGDVATFDNDEDPRVKSPSGFMHITGRIKELIITAGGENVPPVLIENEFKKELPSISNCMVIGDKRKFLSIIIALRVE----------LTGDAVQACKQIGSAAKTVAEAISDPKWTEYIDAAMKACNARTTSNAQRVAKWALIPTDFSVDGGELTPTLKLKRGPAATKYSTIIEGFYA 825
EFG G+P F A L KV LGL++ ++ AAPI EV + Y L +P CT P L S R + YM +KT ET+D +GW+HSGDV DND DPRV PSGF+ ITGRIKELIITAGGEN+PPVLIE++ K +P++SNCM IGDKRKFLSI+ L+VE LTG A++ K+IGS A T EA DP+W Y D +KA N TS AQ+V KW L+ TDF+ GGELTPTLKLKR A +S IE YA
Sbjct: 100 EFGSKTGSPMTFFLAKKL-LHKVHLALGLNECKMLFVSAAPI--EVKILEYFASL-DLPIFELFGQSECTGPHAVNTHDAFKIGTVGRPLLGTKTKVDPETGELCYSGRHIFAGYMGMEDKTKETVDPEGWLHSGDVIKIDNDNDPRVPKPSGFVSITGRIKELIITAGGENIPPVLIEDQMKLAMPALSNCMTIGDKRKFLSILFCLQVEIDEDGNATNKLTGTALETSKEIGSKATTTDEARDDPQWIAYFDKGVKAANDAATSRAQKVQKWGLLSTDFTEPGGELTPTLKLKRSVAQKIHSEAIEAMYA 407
BLAST of mRNA_H-paniculata_contig1798.4331.1 vs. uniprot
Match: B7FXX6_PHATC (Long chain acyl-coa synthetase n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FXX6_PHATC) HSP 1 Score: 229 bits (585), Expect = 3.500e-67 Identity = 113/198 (57.07%), Postives = 139/198 (70.20%), Query Frame = 1
Query: 262 YMYAPEKTAETIDEDGWMHSGDVATFDNDEDPRVKSPSGFMHITGRIKELIITAGGENVPPVLIENEFKKELPSISNCMVIGDKRKFLSIIIALRVE----------LTGDAVQACKQIGSAAKTVAEAISDPKWTEYIDAAMKACNARTTSNAQRVAKWALIPTDFSVDGGELTPTLKLKRGPAATKYSTIIEGFYA 825
YM P+KT ETID GW+HSGD+ D+D P +K PSGF+ ITGRIKELIITAGGENV PVLIE+E K +P+++N MVIGDKRKFLS+++ L+VE LTG+A++A K IGS AKT EA DPKW EY D ++ N + S A RV KWAL+ TDFS GGELTPT+KLKR A K++ I+ YA
Sbjct: 466 YMGMPDKTTETIDSQGWLHSGDIVAIDSDHHPEIKKPSGFISITGRIKELIITAGGENVAPVLIEDELKAAMPALANAMVIGDKRKFLSVLLCLQVEPDIEGNPTNKLTGNALEAAKTIGSKAKTTNEARDDPKWKEYFDKGLEVANKKAISRASRVGKWALLSTDFSEVGGELTPTMKLKRNVTAEKFADTIDAMYA 663 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1798.4331.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1798.4331.1 >prot_H-paniculata_contig1798.4331.1 ID=prot_H-paniculata_contig1798.4331.1|Name=mRNA_H-paniculata_contig1798.4331.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=276bp MNEFGGGGGAPCGFAFANALAFSKVKANLGLDKATAVYTGAAPISKEVSFback to top mRNA from alignment at H-paniculata_contig1798:2644..11428+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1798.4331.1 ID=mRNA_H-paniculata_contig1798.4331.1|Name=mRNA_H-paniculata_contig1798.4331.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8785bp|location=Sequence derived from alignment at H-paniculata_contig1798:2644..11428+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1798:2644..11428+ >mRNA_H-paniculata_contig1798.4331.1 ID=mRNA_H-paniculata_contig1798.4331.1|Name=mRNA_H-paniculata_contig1798.4331.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1656bp|location=Sequence derived from alignment at H-paniculata_contig1798:2644..11428+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |