prot_H-paniculata_contig17973.4329.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17973.4329.1
Unique Nameprot_H-paniculata_contig17973.4329.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length79
Homology
BLAST of mRNA_H-paniculata_contig17973.4329.1 vs. uniprot
Match: A0A6H5K2J9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2J9_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 1.020e-16
Identity = 36/78 (46.15%), Postives = 55/78 (70.51%), Query Frame = 0
Query:    1 MKLPEGCGDKSGRIVRLKKAMYGLKQAGQMWSKHLVEALMDKIGMAQSKSDPCVFRLEKRGVVDMIMRVHVHDVIVSG 78
            +KLP GCGDKS +I + ++++YGLKQ+G+ W  H  + L++  G  Q K+DPCVFR     VV MI+ ++V D++V+G
Sbjct:   32 LKLPAGCGDKSHKIAKAERSIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAG 108          
BLAST of mRNA_H-paniculata_contig17973.4329.1 vs. uniprot
Match: A0A6H5K1V1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1V1_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 1.020e-16
Identity = 38/78 (48.72%), Postives = 55/78 (70.51%), Query Frame = 0
Query:    1 MKLPEGCGDKSGRIVRLKKAMYGLKQAGQMWSKHLVEALMDKIGMAQSKSDPCVFRLEKRGVVDMIMRVHVHDVIVSG 78
            +KLP GCGDKS +I + ++A+YGLKQ+G+ W  H  + L++  G  Q K+DPCVFR     VV MI+ +HV D++V+G
Sbjct:  435 LKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIHVDDILVAG 511          
BLAST of mRNA_H-paniculata_contig17973.4329.1 vs. uniprot
Match: A0A6H5JUF5_9PHAE (C3H1-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUF5_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 1.400e-16
Identity = 37/78 (47.44%), Postives = 56/78 (71.79%), Query Frame = 0
Query:    1 MKLPEGCGDKSGRIVRLKKAMYGLKQAGQMWSKHLVEALMDKIGMAQSKSDPCVFRLEKRGVVDMIMRVHVHDVIVSG 78
            ++LP GCGDKS +IV+ ++A+YGLKQ+G+ W  H+ + L++  G  Q K+DPCVFR     VV MI  ++V D++V+G
Sbjct:  206 LRLPAGCGDKSHKIVKAERAIYGLKQSGRQWGYHVADTLVEN-GFEQCKADPCVFRKMVNKVVVMISMIYVDDILVAG 282          
BLAST of mRNA_H-paniculata_contig17973.4329.1 vs. uniprot
Match: A0A6H5JCD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD8_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 2.630e-16
Identity = 39/78 (50.00%), Postives = 54/78 (69.23%), Query Frame = 0
Query:    1 MKLPEGCGDKSGRIVRLKKAMYGLKQAGQMWSKHLVEALMDKIGMAQSKSDPCVFRLEKRGVVDMIMRVHVHDVIVSG 78
            ++LP+GCG  SG+IVRL++++YGLKQA + W KHLV   M  +G  Q  +D CV RL + GVV M++ VHV D+   G
Sbjct:  731 LRLPQGCGALSGKIVRLRRSLYGLKQASRTWHKHLVRG-MKCLGFEQCAADACVMRLIEEGVVAMVVVVHVDDIFSIG 807          
BLAST of mRNA_H-paniculata_contig17973.4329.1 vs. uniprot
Match: A0A6H5KLY3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLY3_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 2.890e-16
Identity = 37/78 (47.44%), Postives = 56/78 (71.79%), Query Frame = 0
Query:    1 MKLPEGCGDKSGRIVRLKKAMYGLKQAGQMWSKHLVEALMDKIGMAQSKSDPCVFRLEKRGVVDMIMRVHVHDVIVSG 78
            ++LP GCGDKS +IV+ ++A+YGLKQ+G+ W  H  + L++  G  Q K+DPCVFR     VV MI+ ++V D++V+G
Sbjct:   32 LRLPAGCGDKSHKIVKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAG 108          
BLAST of mRNA_H-paniculata_contig17973.4329.1 vs. uniprot
Match: A0A6H5KSR8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSR8_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 3.140e-16
Identity = 37/78 (47.44%), Postives = 56/78 (71.79%), Query Frame = 0
Query:    1 MKLPEGCGDKSGRIVRLKKAMYGLKQAGQMWSKHLVEALMDKIGMAQSKSDPCVFRLEKRGVVDMIMRVHVHDVIVSG 78
            ++LP GCGDKS +IV+ ++A+YGLKQ+G+ W  H  + L++  G  Q K+DPCVFR     VV MI+ ++V D++V+G
Sbjct:   32 LRLPAGCGDKSHKIVKAERALYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAG 108          
BLAST of mRNA_H-paniculata_contig17973.4329.1 vs. uniprot
Match: A0A6H5JZE6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZE6_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 4.320e-16
Identity = 37/78 (47.44%), Postives = 54/78 (69.23%), Query Frame = 0
Query:    1 MKLPEGCGDKSGRIVRLKKAMYGLKQAGQMWSKHLVEALMDKIGMAQSKSDPCVFRLEKRGVVDMIMRVHVHDVIVSG 78
            +KLP GCGDKS +I + ++A+YGLKQ+G+ W  H  + L++  G  Q K+DPCVFR     VV MI+ ++V D++V G
Sbjct:  243 LKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMTDEVVVMIIVIYVDDILVDG 319          
BLAST of mRNA_H-paniculata_contig17973.4329.1 vs. uniprot
Match: A0A6H5K5G1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5G1_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 4.930e-16
Identity = 37/78 (47.44%), Postives = 55/78 (70.51%), Query Frame = 0
Query:    1 MKLPEGCGDKSGRIVRLKKAMYGLKQAGQMWSKHLVEALMDKIGMAQSKSDPCVFRLEKRGVVDMIMRVHVHDVIVSG 78
            +KLP GCGDKS +I + ++A+YGLKQ+G+ W  H  + L++  G  Q K+DPCVFR     VV MI+ ++V D++V+G
Sbjct:  270 LKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAG 346          
BLAST of mRNA_H-paniculata_contig17973.4329.1 vs. uniprot
Match: A0A6H5KFN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN5_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 6.270e-16
Identity = 37/78 (47.44%), Postives = 55/78 (70.51%), Query Frame = 0
Query:    1 MKLPEGCGDKSGRIVRLKKAMYGLKQAGQMWSKHLVEALMDKIGMAQSKSDPCVFRLEKRGVVDMIMRVHVHDVIVSG 78
            +KLP GCGDKS +I + ++A+YGLKQ+G+ W  H  + L++  G  Q K+DPCVFR     VV MI+ ++V D++V+G
Sbjct:  165 LKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAG 241          
BLAST of mRNA_H-paniculata_contig17973.4329.1 vs. uniprot
Match: A0A6H5KMJ1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMJ1_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 6.430e-16
Identity = 36/78 (46.15%), Postives = 56/78 (71.79%), Query Frame = 0
Query:    1 MKLPEGCGDKSGRIVRLKKAMYGLKQAGQMWSKHLVEALMDKIGMAQSKSDPCVFRLEKRGVVDMIMRVHVHDVIVSG 78
            ++LP GCGDKS ++V+ ++A+YGLKQ+G+ W  H  + L++  G  Q K+DPCVFR     VV MI+ ++V D++V+G
Sbjct:  298 LRLPAGCGDKSHKVVKAERAVYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAG 374          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17973.4329.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2J9_9PHAE1.020e-1646.15Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K1V1_9PHAE1.020e-1648.72Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JUF5_9PHAE1.400e-1647.44C3H1-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JCD8_9PHAE2.630e-1650.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KLY3_9PHAE2.890e-1647.44Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KSR8_9PHAE3.140e-1647.44Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZE6_9PHAE4.320e-1647.44Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K5G1_9PHAE4.930e-1647.44Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KFN5_9PHAE6.270e-1647.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMJ1_9PHAE6.430e-1646.15Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 4..78
e-value: 3.5E-10
score: 39.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17973contigH-paniculata_contig17973:4225..4461 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17973.4329.1mRNA_H-paniculata_contig17973.4329.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17973 4093..4461 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17973.4329.1 ID=prot_H-paniculata_contig17973.4329.1|Name=mRNA_H-paniculata_contig17973.4329.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=79bp
MKLPEGCGDKSGRIVRLKKAMYGLKQAGQMWSKHLVEALMDKIGMAQSKS
DPCVFRLEKRGVVDMIMRVHVHDVIVSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2