mRNA_H-paniculata_contig1797.4325.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1797.4325.1 vs. uniprot
Match: D8LE98_ECTSI (RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE98_ECTSI) HSP 1 Score: 660 bits (1703), Expect = 2.580e-226 Identity = 376/600 (62.67%), Postives = 442/600 (73.67%), Query Frame = 1
Query: 1 TSSTLAILGLLAGFVNVDAFRIAPIIPGSVRCCASTRVSRAQNSCQVSATRRSRNAVSSAWRTASGRLSMSTLAATDDY-AATDERDGAKPGHSSVMDELDAILNDVQASESNKPT--GSMAKDIASDGGVLDTLL--ASTSPAIKSPVSSRSPADVDADLDIDDLLGP-----PPQRFTGGGTSSSASQASTLAGGAMGGVRGWDSEQQSRGAGQSRGGPQSFDDYGDEFGSMRGAFASDVNAAREKAVKGDRTLTHLDVDAEGACPVQEKDVDEKTVQALAGRGIDTFTPVQAVTYDHILTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFADDHKTRTQMRGRAPRFLVVCPTRELARQVYEELATLARPFGLRAEVFHGGVSYGPQEGALRSGLDILVATPGRVIDHLQRGNLNLEDVQHAVLDEADEMLNMGFADDIESIFSYVNVRQCQVLLFSATVPSWVKNIANKYTDNPLTVDAVGKNMNKLATTVRHVAIEVSARHRATMLEDIITVYGKGSHAIVFTQTKRECDELAQGQTFKTLTSQVLHGDISQAQRDVTINQFRNKQFQVLVATDVAARGIDVSDIDLVVQYRPPHD 1770
+S+ LA+LGLLAGFVNVDAF + P PG+V S+ V+RA+ + S +RN WR G ST +A ++ AAT E D +KP +SVMDELDAIL DVQ KP G M D LD+LL A+++P + V++ + +D DLD+DDLLGP PPQR++GGGT+ G G D +Q GQ Q Y EFG+ G + K +KGD+ ++ ++V EGACPV+EKDVD KTV AL RGI+ FTPVQA+TYDHIL+GRDIIGKSRTGTGKTIAFGLPVIQHLGRFA+DH+ RT RGR+PRFLVVCPTRELARQVY EL TL FGL+A+VFHGG +YGPQ +L GLDILVATPGR++DHLQRG L+L DV+HAVLDEADEMLNMGFADDIE+IFSYV+V++CQVLLFSATVPSWV+NIANKYT NPLTVDAVGK++NKLATTV+H++IEVS+RHR++MLEDIIT YGKGSHAIVFT +K ECDELA GQTFKTLTSQVLHGDISQ QRD TI FR K FQVLVATDVAARGIDVSDIDLVVQYRPP D
Sbjct: 5 SSTALAVLGLLAGFVNVDAFSLIPAAPGAV----SSSVTRAKTAV-ASLEPPARNT----WRARHGLSMSSTSSAVENAGAATGEVDDSKPPRASVMDELDAILGDVQQDSGTKPASGGGMGAAAPLDQD-LDSLLGSATSAPPATATVAAPKNSGLD-DLDLDDLLGPGANSAPPQRYSGGGTAEGGGSFPAAGRGPPVGGASSDGQQAWGAPGQQ----QQRMSYSGEFGAASGKYGDTAARTASKELKGDQMVSLVEVGEEGACPVEEKDVDPKTVAALKARGIEKFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHQQRTYQRGRSPRFLVVCPTRELARQVYGELETLGSTFGLKADVFHGGAAYGPQMRSLSDGLDILVATPGRIMDHLQRGALDLSDVRHAVLDEADEMLNMGFADDIETIFSYVDVKECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKHVNKLATTVKHLSIEVSSRHRSSMLEDIITYYGKGSHAIVFTNSKAECDELADGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRD 589
BLAST of mRNA_H-paniculata_contig1797.4325.1 vs. uniprot
Match: A0A836CKS6_9STRA (RNA helicase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKS6_9STRA) HSP 1 Score: 436 bits (1121), Expect = 8.730e-143 Identity = 221/328 (67.38%), Postives = 260/328 (79.27%), Query Frame = 1
Query: 787 DVDEKTVQALAGRGIDTFTPVQAVTYDHILTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFADDHKTRTQMRGRAPRFLVVCPTRELARQVYEELATLARPFGLRAEVFHGGVSYGPQEGALRSGLDILVATPGRVIDHLQRGNLNLEDVQHAVLDEADEMLNMGFADDIESIFSYVNVRQCQVLLFSATVPSWVKNIANKYTDNPLTVDAVGKNMNKLATTVRHVAIEVSARHRATMLEDIITVYGKGSHAIVFTQTKRECDELAQGQTFKTLTSQVLHGDISQAQRDVTINQFRNKQFQVLVATDVAARGIDVSDIDLVVQYRPPHD 1770
+V + T+ L G+GI FTPVQAVTY+HIL GRD+I KSRTGTGKTIAFGLPVIQHL RFADD +R+ R AP +V +ELA LA+P G+ E F+GG SYGPQE ALR G+D++V TPGR+IDH+Q+GNL+L +++HAVLDEADEMLNMGFAD IE +F+ VN+ +CQVLLFSATVP WV+ I+ Y NPL VDAVG N+LATTV+H+AIE +R+RA MLED+I VYGKGS AIVFTQTKRECDELA G FKTL+SQVLHGDI Q QR+VTI QFR QFQVLVATDVAARGID+S+IDLVVQYRPP D
Sbjct: 57 EVIQSTIDVLLGKGITHFTPVQAVTYEHILAGRDMIAKSRTGTGKTIAFGLPVIQHLARFADDADSRSSKRYAAPLMRTYHLATNTYSKVADELAQLAQPHGMSVECFYGGASYGPQESALRRGVDVVVGTPGRLIDHVQKGNLDLSELKHAVLDEADEMLNMGFADAIEELFARVNIPECQVLLFSATVPDWVRRISAAYLKNPLQVDAVGTTDNRLATTVKHLAIETPSRNRAHMLEDVIAVYGKGSRAIVFTQTKRECDELAAGNAFKTLSSQVLHGDIGQNQREVTIGQFRKGQFQVLVATDVAARGIDISEIDLVVQYRPPTD 384
BLAST of mRNA_H-paniculata_contig1797.4325.1 vs. uniprot
Match: A0A835ZP19_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZP19_9STRA) HSP 1 Score: 377 bits (969), Expect = 2.300e-118 Identity = 203/340 (59.71%), Postives = 236/340 (69.41%), Query Frame = 1
Query: 751 VDAEGACPVQEKDVDEKTVQALAGRGIDTFTPVQAVTYDHILTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFADDHKTRTQMRGRAPRFLVVCPTRELARQVYEELATLARPFGLRAEVFHGGVSYGPQEGALRSGLDILVATPGRVIDHLQRGNLNLEDVQHAVLDEADEMLNMGFADDIESIFSYVNVRQCQVLLFSATVPSWVKNIANKYTDNPLTVDAVGKNMNKLATTVRHVAIEVSARHRATMLEDIITVYGKGSHAIVFTQTKRECDELAQGQTFKTLTSQVLHGDISQAQRDVTINQFRNKQFQVLVATDVAARGIDVSDIDLVVQYRPPHD 1770
VD PV KDVD+KTV+ L +GI+ FTPVQ+VTY+HIL GRDI+ +SRTGTGKTIAFGLPVIQHLGRFADD TRT RGR PRFLVVCPTRELA+QV +EL+ LARP L+ E F+GG SYGPQE ALR GLDI+V TPGR+IDH+ +GNL+L +++HAVLDEADEMLNMGFADDIE IFS V++ CQVLLFSATVP WVK I+ Y NPL+ A+ K N+ + T +A+ QVLHGDI Q QR+VTI QFR QFQVLVATDVAARGID+S+IDLVVQYRPP D
Sbjct: 141 VDLSSKAPVDSKDVDDKTVEILRSKGIEFFTPVQSVTYEHILGGRDIVARSRTGTGKTIAFGLPVIQHLGRFADDADTRTNTRGRRPRFLVVCPTRELAKQVADELSQLARPHNLQVECFYGGSSYGPQESALRRGLDIVVGTPGRLIDHINKGNLDLSELKHAVLDEADEMLNMGFADDIEEIFSKVDIPACQVLLFSATVPDWVKRISAAYLKNPLSFIALLKTHNRPSCT----------------------------YAV-----------------------QVLHGDIGQNQREVTIGQFRKSQFQVLVATDVAARGIDISEIDLVVQYRPPTD 429
BLAST of mRNA_H-paniculata_contig1797.4325.1 vs. uniprot
Match: A0A7S2V2B9_9STRA (RNA helicase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2B9_9STRA) HSP 1 Score: 370 bits (949), Expect = 2.160e-115 Identity = 186/329 (56.53%), Postives = 246/329 (74.77%), Query Frame = 1
Query: 787 DVDEKTVQALAGRGIDTFTPVQAVTYDHILTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFADDHKTRTQMRGRAPRFLVVCPTRELARQVYEELATLARPFGLRAEVFHGGVSYGPQEGALRSGLDILVATPGRVIDHLQRGNLNLEDVQHAVLDEADEMLNMGFADDIESIFSYVNVRQCQVLLFSATVPSWVKNIANKYTDNPLTVDAVGKNMNKLATTVRHVAIEVSARHRATMLEDIITVYGKGSHAIVFTQTKRECDELAQGQTFKTLTSQVLHGDISQAQRDVTINQFRNKQFQVLVATDVAARGIDVSDIDLVVQYRPPHDS 1773
+VD++ + LA +GI FT +Q + IL G+DIIG+SRTGTGKT+AF LP++Q L D+ + T+ RGR PR L++CPTRELA+QV E+ ++ PF L+ F+GG +YGPQ ALR GLDI+V TPGRV+D + RG+L L+++QHAVLDEADEMLNMGFA+D+E+IF + QVL+FSAT P WVK I+++YTD P+++DAVG + +LATTV HV+IEV +A +LED+I V+GKGS AIVF QTK ECD L FK++++Q LHGD+SQ RD I QF+N +FQVLVATDVAARG+D+S +DLVVQ PP D+
Sbjct: 199 EVDDRIKKTLAAKGITHFTLIQEQSLKPILEGKDIIGRSRTGTGKTVAFTLPLLQKL----DEDPSATRQRGRDPRVLILCPTRELAKQVEAEINDMSTPFRLQTHCFYGGSAYGPQANALRGGLDIVVGTPGRVMDLINRGDLRLQNIQHAVLDEADEMLNMGFAEDVETIFGNFDTDSAQVLMFSATTPDWVKEISSRYTDKPVSIDAVGNSQTRLATTVNHVSIEVDRDLKAGILEDLIAVHGKGSRAIVFAQTKAECDHLTTS-AFKSVSAQPLHGDMSQKLRDTCIKQFKNHKFQVLVATDVAARGLDISGVDLVVQLNPPFDT 522
BLAST of mRNA_H-paniculata_contig1797.4325.1 vs. uniprot
Match: F0YDB9_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDB9_AURAN) HSP 1 Score: 352 bits (903), Expect = 5.830e-112 Identity = 193/347 (55.62%), Postives = 231/347 (66.57%), Query Frame = 1
Query: 790 VDEKTVQALAGRGIDTFTPVQAVTYDHILTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFADDHKTRTQMRGRAPRFLVVCPTRELARQVYEELATLARPFGLRAEVFHGGVSYGPQEGALRSGLDILVATPGRVIDHLQRGNLNLEDVQHAVLDEADEMLNMGFADDIESIFSYVNV-----------------RQCQVLLFSATVPSWVKNIANKYTDNPLTVDAVGKNMNKLATTVRHVAIEV--SARHRATMLEDIITVYGKGSHAIVFTQTKRECDELAQGQTFKTLTSQVLHGDISQAQRDVTINQFRNKQFQVLVATDVAARGIDVSDIDLVVQYRPPHDS 1773
V K LA RGIDT T +Q +T+D GRD++GKSRTGTGKT+AFGLP+++ L A + + R R P LV+ PTRELA+QV EL LA+ GL FHGGVSYGPQE ALR G+D+LVAT GRVIDH+ RGNL+L D H VLDEADEML+MGFADD+E IFS ++ R+ Q LLFSAT PSWVK + +KY ++P VD VG + ATTV H A+ V RA++LEDII G IVFT TK+ECDELA G F+ L +QVLHGDI QAQR+ T+ QFR F VLVATDVAARGIDV +DLVVQYR P D+
Sbjct: 94 VHAKQAAKLAQRGIDTMTEIQHLTFDAAHAGRDVLGKSRTGTGKTLAFGLPLVERLAERAREGDYDPKKRARGPAILVLAPTRELAKQVEAELHLLAQTHGLSTTCFHGGVSYGPQENALRRGVDVLVATVGRVIDHIDRGNLDLSDAYHVVLDEADEMLSMGFADDVERIFSDFDLDDLLGAAPPPADAAAPLRRPQTLLFSATTPSWVKKLTSKYLEDPELVDVVGDARQQAATTVTHKAVLVPRGPDARASLLEDIIAAAQGGGRVIVFTSTKKECDELAGGPAFQRLAAQVLHGDIGQAQRETTLAQFRRGAFTVLVATDVAARGIDVKGVDLVVQYRTPRDA 440
BLAST of mRNA_H-paniculata_contig1797.4325.1 vs. uniprot
Match: A0A7S2DBW6_9STRA (RNA helicase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DBW6_9STRA) HSP 1 Score: 349 bits (896), Expect = 5.850e-108 Identity = 197/386 (51.04%), Postives = 260/386 (67.36%), Query Frame = 1
Query: 637 SFDDY-GDEFGSMRGAFASDVNAAREKAVKGDRTLTHLDVDAEGACPVQEKDVDEKTVQALAGRGIDTFTPVQAVTYDHILTGRDIIGKSRTGTGKTIAFGLPVIQHL---GRFADDHKTRTQMRGRAPRFLVVCPTRELARQVYEELATLARPFGLRAEVFHGGVSYGPQEGALRSGLDILVATPGRVIDHLQRGNLNLEDVQHAVLDEADEMLNMGFADDIESIFSYVNVRQCQVLLFSATVPSWVKNIANKYTDNPLTVDAVGKNMNKLATTVRHVAIEVSARH--RATMLEDIITVY-GKGSHAIVFTQTKRECDELAQGQTFKTLTSQVLHGDISQAQRDVTINQFRNKQFQVLVATDVAARGIDVSDIDLVVQYRPPHDS 1773
SFDD +F ++ + EK V ++ LT +D ++ V +TV L+ +G FT +Q+ + + GRD+I +SRTGTGKTIAFGLP+++ + GR D RGRAPR LV+ PTRELARQV EL TL R + VFHGG YGPQEG+LR+G+DILVATPGR++DHL RG L L+DV+H VLDEADEML+MGF+ DIE + S+V++ Q LLFSAT PSW++ I+ +Y +PL +DAVG N + ATTV H A+ V R ++LED+ITV G S IVFTQTKRE DEL+ G F+ L++ VLHGD+SQ QRDVT+ QF++ +F+VLVATDVAARGID+S++D+VVQ P +S
Sbjct: 106 SFDDILSGKFSNVDDLLDDIIADKDEKEVDPNKGLTPIDGFSQ---------VHPRTVADLSKKGFTHFTDIQSQAFLPVFEGRDVIARSRTGTGKTIAFGLPIVEAIAASGRELD--------RGRAPRLLVMAPTRELARQVAAELGTLGRAYRFSVAVFHGGAPYGPQEGSLRNGIDILVATPGRILDHLNRGGLKLDDVRHVVLDEADEMLDMGFSKDIEEVLSFVDMDAAQTLLFSATTPSWIQRISAQYMTDPLRLDAVGANEQRTATTVAHKAMLVPDNDEVRMSLLEDVITVEAGVESKTIVFTQTKREADELSSGSAFRVLSAGVLHGDLSQKQRDVTLAQFKSGKFKVLVATDVAARGIDISNVDVVVQTSMPQNS 474
BLAST of mRNA_H-paniculata_contig1797.4325.1 vs. uniprot
Match: I2CNZ0_NANGC (RNA helicase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CNZ0_NANGC) HSP 1 Score: 349 bits (895), Expect = 5.060e-107 Identity = 180/342 (52.63%), Postives = 240/342 (70.18%), Query Frame = 1
Query: 754 DAEGACPVQEKDVDEKTVQALAGRGIDTFTPVQAVTYDHILTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFADDHKTRTQMRGRAPRFLVVCPTRELARQVYEELATLARPFGLRAEVFHGGVSYGPQEGALRSGLDILVATPGRVIDHLQRGNLNLEDVQHAVLDEADEMLNMGFADDIESIFSYVNVRQCQVLLFSATVPSWVKNIANKYTDNPLTVDAVGKNMNKLATTVRHVAIEV--SARHRATMLEDIITVYGKGSHAIVFTQTKRECDELAQGQTFKTLTSQVLHGDISQAQRDVTINQFRNKQFQVLVATDVAARGIDVSDIDLVVQYRPPHDS 1773
D G + EK V V++LAG I FTP+Q T+D + GRD+IG+SRTGTGKT+AFGLP+++ + + + T+ RGR+P +++ PTRELA+Q E+L+ + RP GL +GGV Y Q L SG D+LV TPGR++DHL RG L+L D++H +LDEADEML MGFA+DIE IFSY +V Q Q+LLFSAT PSWV+ IA KY NP+ VDAVG N+ ATT+RHVA++V S R +LED+I + G +VFTQTK E DEL+ + ++VLHGDI+Q QR++T+ QFR+ F+VL+ATDVAARGID+ ++DLV+QYRP DS
Sbjct: 175 DEGGEMSIDEKRVSPGVVESLAGANITHFTPIQRETFDPLFEGRDMIGRSRTGTGKTLAFGLPILEAVAKNMEAAGTKNA-RGRSPSVIILAPTRELAKQCDEQLSRIGRPLGLWIRTIYGGVPYERQIRDLESGFDVLVGTPGRIMDHLDRGTLSLNDIKHIILDEADEMLKMGFAEDIEKIFSYFDVTQAQMLLFSATTPSWVQVIARKYLKNPINVDAVGGG-NRAATTIRHVAVKVPDSYSARKNVLEDVIAAHSCGGRVMVFTQTKSEADELSTSSPYAAENTRVLHGDITQRQRELTLRQFRDGFFKVLIATDVAARGIDIPEVDLVIQYRPCDDS 514
BLAST of mRNA_H-paniculata_contig1797.4325.1 vs. uniprot
Match: A0A1E7ET30_9STRA (DEAD-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ET30_9STRA) HSP 1 Score: 335 bits (858), Expect = 1.210e-106 Identity = 183/337 (54.30%), Postives = 231/337 (68.55%), Query Frame = 1
Query: 790 VDEKTVQALAGRGIDTFTPVQAVTYDHILTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAD-----DHKTRTQMRGRAPRFLVVCPTRELARQVYEELATLARPFGLRAEVFHGGVSYGPQEGALRSGLDILVATPGRVIDHLQRGNLNLEDVQHAVLDEADEMLNMGFADDIESI---FSYVNVRQCQVLLFSATVPSWVKNIANKYTDNPLTVDAVGKNM-NKLATTVRHVAIEVS-ARHRATMLEDIITVYGKGSHAIVFTQTKRECDELAQGQTFKTLTSQVLHGDISQAQRDVTINQFRNKQFQVLVATDVAARGIDVSDIDLVVQYRPPHD 1770
+D+ + L+G+GI FTPVQ +D IL GRD+IG+SRTGTGKT+AFGLP I L ++ + D +T RGRA LV+CPTRELARQV EE++ +ARP GL AEVFHGGVSY Q ALRSGLDILV TPGR++DH+ RG L L + VLDEADEML+MGFADD+E++ F N ++ Q LLFSAT P WVK I +Y +N + +DA +++ATTVRH AI+V A+ A ++GK IVFT+TKR DEL G FK+LT+Q LHGD+ Q QRD + FR F VLVATDVAARGID+ ++D+VVQ+ PP D
Sbjct: 1 LDQNVIDVLSGKGITHFTPVQGEAFDPILAGRDVIGRSRTGTGKTLAFGLPSITRLVKWLEEKGVRDPQTGNMKRGRAVSMLVLCPTRELARQVQEEISDVARPLGLFAEVFHGGVSYDGQSRALRSGLDILVGTPGRIMDHMNRGTLRLNEADLIVLDEADEMLSMGFADDVETMLDGFGKDNGKKPQCLLFSATTPPWVKQIGRQYQENVIAIDATNDTGGSRVATTVRHTAIQVPWAKKNAESSAVQQKIFGK---TIVFTETKRAADELVSGGVFKSLTAQALHGDVGQKQRDSILAAFRAGAFNVLVATDVAARGIDIKNVDVVVQFDPPRD 334
BLAST of mRNA_H-paniculata_contig1797.4325.1 vs. uniprot
Match: A0A7S3ZWQ0_9STRA (RNA helicase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZWQ0_9STRA) HSP 1 Score: 345 bits (885), Expect = 6.100e-106 Identity = 204/441 (46.26%), Postives = 257/441 (58.28%), Query Frame = 1
Query: 670 MRGAFASDVNAAREKAVKGDRTLTHLDVDAEGACPVQ--------------EKD-------VDEKTVQALAGRGIDTFTPVQAVTYDHILTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFADDHKTRTQMRGRAPRFLVVCPTRELARQVYEELATLARPFGLRAEVFHGGVSYGPQEGALRSGLDILVATPGRVIDHLQRGNLNLEDVQHAVLDEADEMLNMGFADDIESIFS-------------------------------------YVNVRQCQVLLFSATVPSWVKNIANKYTDNPLTVDAVGKNMNKLATTVRHVAIEVSARH--RATMLEDIITV-------------YGKGSHAIVFTQTKRECDELAQGQTFKTLTSQVLHGDISQAQRDVTINQFRNKQFQVLVATDVAARGIDVSDIDLVVQYRPPHDS 1773
+R AF S AA +V ++ ++DVD E A PV+ EKD + ++ + LA RGI TFT +Q +Y+ + GRD++GKSRTGTGKT+AFGLP+I+ L + + + RGR P LV+ PTRELA+QV++EL LA G FHGGVSYGPQEGALR G+DILVAT GRVIDH+ RGNL L D H VLDEADEML+MGFADD+E IF R+ Q LLFSAT P W+K + ++ + + VD VG + ATTV H A+ V + RA++LEDII+V G IVFT TKRECDELA G F+ L++QVLHGDI Q+QR+ T+ QFR QF VLVATDVAARGIDV +DLVVQ+R P D+
Sbjct: 30 IRTAFKSSTRAAPLMSVVDKESMDYVDVDTELAAPVEDVVVGEEVVPDAEPEKDPMAIEGRISDRQAERLAERGITTFTEIQHRSYEPVFEGRDLLGKSRTGTGKTVAFGLPIIEKLAEMRSNGEYDHKRRGRGPAMLVLTPTRELAKQVHDELKYLADTHGFSTTCFHGGVSYGPQEGALRRGVDILVATVGRVIDHIDRGNLQLNDAYHVVLDEADEMLSMGFADDVERIFGECPAGKAKGMGSGGGAPAPDDAFDLDELLGEEAPPAPVAESRRPQTLLFSATSPGWIKKMTRRFMTDHVFVDVVGDATQQAATTVTHKAVLVPRSNDARASLLEDIISVELSQRQGQVTDEQQNGGGRVIVFTATKRECDELAGGPAFQRLSAQVLHGDIGQSQREATLAQFRRGQFSVLVATDVAARGIDVKGVDLVVQFRTPRDA 470
BLAST of mRNA_H-paniculata_contig1797.4325.1 vs. uniprot
Match: A0A7S2VDX4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VDX4_9STRA) HSP 1 Score: 335 bits (859), Expect = 3.040e-105 Identity = 187/373 (50.13%), Postives = 236/373 (63.27%), Query Frame = 1
Query: 781 EKDVDEKTVQALAGRGIDTFTPVQAVTYDHILTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFADDHKTRTQM----RGRAPRFLVVCPTRELARQVYEELATLARPFGLRAEVFHGGVSYGPQEGALRSGLDILVATPGRVIDHLQRGNLNLEDVQHAVLDEADEMLNMGFADDIESIFSYVNVRQ---CQVLLFSATVPSWVKNIANKYTDNPLTVDAVGKNMN-KLATTVRHVAIEV--SARHRATMLEDIITV-YGKGSH--------------------------------AIVFTQTKRECDELAQGQTFKTLTSQVLHGDISQAQRDVTINQFRNKQFQVLVATDVAARGIDVSDIDLVVQYRPPHD 1770
E +D+ + L+G+GI TFTPVQ ++ ++ GRD+IG+SRTGTGKT+AFGLP + + + TR + RGR +V+CPTRELARQV EEL+ +ARP G EVFHGGVSY PQ ALRSG+D+LV TPGR++DH+ RGNL+L + AVLDEADEMLNMGFA+D+E I V V Q LLFSAT P WVK I KY + VDA G ++ATTVRH+A+++ + ++LEDII V KG + IVFT+TKRE DEL G FK+LT+Q LHGD+ Q QRD T+N FR F VLVATDVAARGID+ D+DLV+Q+ PP D
Sbjct: 115 EAGLDQNVIDILSGKGITTFTPVQGEAFEPVVNGRDVIGRSRTGTGKTLAFGLPSLTRMVELTQNKGTRDESGRMKRGRKVSMVVLCPTRELARQVSEELSGVARPLGFFVEVFHGGVSYEPQARALRSGVDVLVGTPGRIMDHMDRGNLDLSECNIAVLDEADEMLNMGFAEDVEVILEDVGVANEDATQCLLFSATTPPWVKQIGAKYQTDVYAVDATGDEGGARVATTVRHMAVQLPPGVESKRSILEDIIAVEISKGDNKAEVDETNAIAAXXXXXXXXXXGAMQQKIFGKTIVFTETKREADELVSGGVFKSLTAQALHGDVGQKQRDSTLNAFRAGAFNVLVATDVAARGIDIQDVDLVIQFDPPRD 487 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1797.4325.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1797.4325.1 >prot_H-paniculata_contig1797.4325.1 ID=prot_H-paniculata_contig1797.4325.1|Name=mRNA_H-paniculata_contig1797.4325.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=591bp TSSTLAILGLLAGFVNVDAFRIAPIIPGSVRCCASTRVSRAQNSCQVSATback to top mRNA from alignment at H-paniculata_contig1797:479..6296- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1797.4325.1 ID=mRNA_H-paniculata_contig1797.4325.1|Name=mRNA_H-paniculata_contig1797.4325.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5818bp|location=Sequence derived from alignment at H-paniculata_contig1797:479..6296- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1797:479..6296- >mRNA_H-paniculata_contig1797.4325.1 ID=mRNA_H-paniculata_contig1797.4325.1|Name=mRNA_H-paniculata_contig1797.4325.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3546bp|location=Sequence derived from alignment at H-paniculata_contig1797:479..6296- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |