prot_H-paniculata_contig17969.4324.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17969.4324.1
Unique Nameprot_H-paniculata_contig17969.4324.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length103
Homology
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BLAST of mRNA_H-paniculata_contig17969.4324.1 vs. uniprot
Match: D8LHV3_ECTSI (Endonuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV3_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 1.750e-44
Identity = 72/95 (75.79%), Postives = 82/95 (86.32%), Query Frame = 0 
Query:    1 IILPSREYTSCWDSRTRNVRWVLERINEATVMGAGDRKRASFRADSRLEPLFRTELSDYRGSGLDRGHLAPAGDHKTTEQNLKETFLLTNMAPQV 95
            +ILPS EYTSCWDSRTRN RWV+ERIN  TV G GDRK++ FR DSRL+PLFR+ LSD+ GSG DRGHLAPAGDHKTT+ NL +TFLL+NMAPQV
Sbjct:   32 VILPSEEYTSCWDSRTRNARWVVERINLNTVSGPGDRKKSPFRPDSRLQPLFRSSLSDFYGSGYDRGHLAPAGDHKTTQANLTQTFLLSNMAPQV 126
[Close]
BLAST of mRNA_H-paniculata_contig17969.4324.1 vs. uniprot
Match: A0A6H5JV63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV63_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 8.990e-43
Identity = 70/95 (73.68%), Postives = 82/95 (86.32%), Query Frame = 0 
Query:    1 IILPSREYTSCWDSRTRNVRWVLERINEATVMGAGDRKRASFRADSRLEPLFRTELSDYRGSGLDRGHLAPAGDHKTTEQNLKETFLLTNMAPQV 95
            +ILPS EYTSCWDSRTRN RWV+ERIN  TV G GDRK++ FR DSRL+PLFR+ LSD+ GSG DRGHLAPAG+HKTT+ NL +TFLL+NMAPQ+
Sbjct:   87 VILPSEEYTSCWDSRTRNARWVVERINLNTVSGPGDRKKSPFRPDSRLQPLFRSSLSDFYGSGYDRGHLAPAGNHKTTQANLTQTFLLSNMAPQM 181
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BLAST of mRNA_H-paniculata_contig17969.4324.1 vs. uniprot
Match: A0A7S2Z7Z8_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2Z7Z8_9CHLO)

HSP 1 Score: 99.4 bits (246), Expect = 1.440e-23
Identity = 44/95 (46.32%), Postives = 66/95 (69.47%), Query Frame = 0 
Query:    1 IILPSREYTSCWDSRTRNVRWVLERINEATVMGAGDRKRASFRADSRLEPLFRTELSDYRGSGLDRGHLAPAGDHKTTEQNLKETFLLTNMAPQV 95
            ++ P   + S +D+RTRN  WV+ERI+E T  G G+RK + F+ D+ +    R +L D+RGSG DRGH+APA  HK +++ + ETF L+N++PQV
Sbjct:  105 VLRPFTNFVSFFDTRTRNPHWVIERISEETSNGDGNRKFSFFKEDAAIPSKLRNKLEDFRGSGYDRGHMAPASAHKLSQKTMDETFTLSNISPQV 199
[Close]
BLAST of mRNA_H-paniculata_contig17969.4324.1 vs. uniprot
Match: I0YZI9_COCSC (Endonuclease (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZI9_COCSC)

HSP 1 Score: 99.0 bits (245), Expect = 1.470e-23
Identity = 45/94 (47.87%), Postives = 60/94 (63.83%), Query Frame = 0 
Query:    6 REYTSCWDSRTRNVRWVLERINEATVMGAGDRKRASFRADSRLEPLFRTELSDYRGSGLDRGHLAPAGDHKTTEQNLKETFLLTNMAPQVSLSY 99
            + +   +DSRTRN RWVLE I  A   G G+RK   F  D  L+  FR+ LSD++ SG DRGH+APA +HK T   + ETF+L+N +PQV   +
Sbjct:   15 KNFVLSFDSRTRNPRWVLEHITRAQTQGEGNRKNVEFYEDKSLDQRFRSRLSDFKESGFDRGHMAPAANHKETADTMLETFVLSNTSPQVGRGF 108
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BLAST of mRNA_H-paniculata_contig17969.4324.1 vs. uniprot
Match: A0A5B8MD10_9CHLO (DNA/RNA non-specific endonuclease n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MD10_9CHLO)

HSP 1 Score: 102 bits (253), Expect = 2.260e-23
Identity = 46/95 (48.42%), Postives = 64/95 (67.37%), Query Frame = 0 
Query:    1 IILPSREYTSCWDSRTRNVRWVLERINEATVMGAGDRKRASFRADSRLEPLFRTELSDYRGSGLDRGHLAPAGDHKTTEQNLKETFLLTNMAPQV 95
            I+ P   + S +D+RTRN  WV+ERI+E T  G GDRK + F+ D ++    R +L D+RGSG DRGH+APA  HK  +  + ETF L+N++PQV
Sbjct:  107 ILRPFTNFVSYFDTRTRNPHWVIERISEDTSRGDGDRKFSKFKEDDKIPDKLRNKLDDFRGSGYDRGHMAPASAHKLNQATMDETFTLSNISPQV 201
[Close]
BLAST of mRNA_H-paniculata_contig17969.4324.1 vs. uniprot
Match: A0A2P6TKJ2_CHLSO (Mitochondrial nuclease n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TKJ2_CHLSO)

HSP 1 Score: 100 bits (250), Expect = 3.910e-23
Identity = 47/94 (50.00%), Postives = 64/94 (68.09%), Query Frame = 0 
Query:    7 EYTSCWDSRTRNVRWVLERINEATVMGA-GDRKRASFRADSRLEPLFRTELSDYRGSGLDRGHLAPAGDHKTTEQNLKETFLLTNMAPQVSLSY 99
            ++ + +D+R RN RWVLE IN   +    G R+ + F  DS +E  FR++L DYRGSG DRGH+APA +HKTT+  + ETF LTNM+PQV   +
Sbjct:   66 DFAASFDTRLRNPRWVLEHINRGKLSSREGSRQNSEFVEDSGIERRFRSKLDDYRGSGYDRGHMAPASNHKTTQSTMDETFSLTNMSPQVGAGF 159
[Close]
BLAST of mRNA_H-paniculata_contig17969.4324.1 vs. uniprot
Match: A0A059LI60_9CHLO (DNA/RNA non-specific endonuclease n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LI60_9CHLO)

HSP 1 Score: 99.8 bits (247), Expect = 4.580e-23
Identity = 46/88 (52.27%), Postives = 58/88 (65.91%), Query Frame = 0 
Query:    8 YTSCWDSRTRNVRWVLERINEATVMGAGDRKRASFRADSRLEPLFRTELSDYRGSGLDRGHLAPAGDHKTTEQNLKETFLLTNMAPQV 95
            Y S  D R RN RWV+E +  A++ GAG R  + F  D  +EP FR  LSDYRGSG DRGH+APA +HK ++Q +  TF L+N  PQV
Sbjct:   13 YASLVDVRLRNPRWVIEHLTAASLQGAGSRGNSQFVEDEGIEPRFRARLSDYRGSGYDRGHMAPASNHKASQQAMDATFTLSNTCPQV 100
[Close]
BLAST of mRNA_H-paniculata_contig17969.4324.1 vs. uniprot
Match: A0A8J9WNK3_9CHLO (Probable endonuclease G, mitochondrial n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WNK3_9CHLO)

HSP 1 Score: 99.8 bits (247), Expect = 1.680e-22
Identity = 46/94 (48.94%), Postives = 61/94 (64.89%), Query Frame = 0 
Query:    6 REYTSCWDSRTRNVRWVLERINEATVMGAGDRKRASFRADSRLEPLFRTELSDYRGSGLDRGHLAPAGDHKTTEQNLKETFLLTNMAPQVSLSY 99
            + +   +DSRTRN RWVLE I  A   G G+RK   F  D  L+  FR+ LSD+R SG DRGH+APA +HK T   + ETF+L+N++PQV   +
Sbjct:   56 QNFVLSFDSRTRNPRWVLEHITRAQTRGDGNRKNVEFYEDKELDQRFRSRLSDFRESGYDRGHMAPAANHKETADTMLETFVLSNISPQVGRGF 149
[Close]
BLAST of mRNA_H-paniculata_contig17969.4324.1 vs. uniprot
Match: A0A835YH22_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YH22_9CHLO)

HSP 1 Score: 98.2 bits (243), Expect = 6.420e-22
Identity = 44/99 (44.44%), Postives = 63/99 (63.64%), Query Frame = 0 
Query:    1 IILPSREYTSCWDSRTRNVRWVLERINEATVMGAGDRKRASFRADSRLEPLFRTELSDYRGSGLDRGHLAPAGDHKTTEQNLKETFLLTNMAPQVSLSY 99
            I+ P   Y + +D RTRN +WVLE I  A+  G   R R+ F  D  ++P F  +LSD+RGSG DRGH+APA +HK +++ + ETF L N++PQ    +
Sbjct:   53 IVRPYEGYVAAYDYRTRNPKWVLEHITPASWSGEASRDRSEFFPDPGVDPRFSAQLSDFRGSGYDRGHMAPAANHKVSQKAMDETFSLVNISPQAGKGF 151
[Close]
BLAST of mRNA_H-paniculata_contig17969.4324.1 vs. uniprot
Match: A0A7K8XF69_9PICI (Endonuclease (Fragment) n=4 Tax=Piciformes TaxID=9219 RepID=A0A7K8XF69_9PICI)

HSP 1 Score: 96.3 bits (238), Expect = 6.850e-22
Identity = 45/93 (48.39%), Postives = 63/93 (67.74%), Query Frame = 0 
Query:    3 LPSRE-YTSCWDSRTRNVRWVLERINEATVMGAGDRKRASFRADSRLEPLFRTELSDYRGSGLDRGHLAPAGDHKTTEQNLKETFLLTNMAPQ 94
            L SRE Y  C+D R+R+  WV+E++N+ T+ GA DR    FR D  +    R   +DYRGSG DRGHLA A +HK ++Q +++TF L+N+APQ
Sbjct:   75 LRSRESYVLCYDPRSRSALWVIEQLNQHTLSGASDRAACDFREDDSVHEYHRATNADYRGSGFDRGHLAAAANHKWSQQAMRDTFYLSNIAPQ 167
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17969.4324.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHV3_ECTSI1.750e-4475.79Endonuclease n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5JV63_9PHAE8.990e-4373.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2Z7Z8_9CHLO1.440e-2346.32Hypothetical protein (Fragment) n=1 Tax=Chloropico... [more]
I0YZI9_COCSC1.470e-2347.87Endonuclease (Fragment) n=1 Tax=Coccomyxa subellip... [more]
A0A5B8MD10_9CHLO2.260e-2348.42DNA/RNA non-specific endonuclease n=1 Tax=Chloropi... [more]
A0A2P6TKJ2_CHLSO3.910e-2350.00Mitochondrial nuclease n=1 Tax=Chlorella sorokinia... [more]
A0A059LI60_9CHLO4.580e-2352.27DNA/RNA non-specific endonuclease n=1 Tax=Helicosp... [more]
A0A8J9WNK3_9CHLO1.680e-2248.94Probable endonuclease G, mitochondrial n=1 Tax=Coc... [more]
A0A835YH22_9CHLO6.420e-2244.44Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A7K8XF69_9PICI6.850e-2248.39Endonuclease (Fragment) n=4 Tax=Piciformes TaxID=9... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020821Extracellular Endonuclease, subunit ASMARTSM00477endopluscoord: 5..100
e-value: 1.3E-4
score: -31.5
IPR001604DNA/RNA non-specific endonucleasePFAMPF01223Endonuclease_NScoord: 7..95
e-value: 5.1E-25
score: 88.6
NoneNo IPR availableGENE3D3.40.570.10coord: 1..99
e-value: 1.6E-33
score: 118.1
NoneNo IPR availablePANTHERPTHR13966:SF5ENDONUCLEASE G, MITOCHONDRIALcoord: 6..95
NoneNo IPR availableSUPERFAMILY54060His-Me finger endonucleasescoord: 5..96
IPR040255Non-specific endonucleasePANTHERPTHR13966ENDONUCLEASE RELATEDcoord: 6..95
IPR018524DNA/RNA non-specific endonuclease, active sitePROSITEPS01070NUCLEASE_NON_SPECcoord: 65..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17969contigH-paniculata_contig17969:2397..5099 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17969.4324.1mRNA_H-paniculata_contig17969.4324.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17969 2397..5099 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17969.4324.1 ID=prot_H-paniculata_contig17969.4324.1|Name=mRNA_H-paniculata_contig17969.4324.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=103bp
IILPSREYTSCWDSRTRNVRWVLERINEATVMGAGDRKRASFRADSRLEP
LFRTELSDYRGSGLDRGHLAPAGDHKTTEQNLKETFLLTNMAPQVSLSYK
VL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020821Extracellular_endonuc_su_A
IPR001604DNA/RNA_non-sp_Endonuclease
IPR040255Non-specific_endonuclease
IPR018524DNA/RNA_endonuclease_AS