prot_H-paniculata_contig17957.4321.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17957.4321.1
Unique Nameprot_H-paniculata_contig17957.4321.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length105
Homology
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BLAST of mRNA_H-paniculata_contig17957.4321.1 vs. uniprot
Match: D7G152_ECTSI (Mcl1_mid domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G152_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 1.570e-26
Identity = 64/108 (59.26%), Postives = 77/108 (71.30%), Query Frame = 0 
Query:    1 MDAIATEKDGTRIFIAGGEGMMKEFDLKT---QNFVREIELDVDDTSDEGFAGTALAISPDGKELALGLVNGHVNLYDLPSLEFKSILVRFTAPVLDLDYGM-GGEVM 104
            MDA AT  DG RIF  G EGM+K FD K+   Q+ V E+ LDV+D  DEG A TA+A+SP G ELA+GL NG V L+ LP L+FKS+L RFTAPVL L YGM  G+V+
Sbjct:   20 MDA-ATTSDGLRIFAGGAEGMVKVFDPKSSSIQDAVAELNLDVNDEGDEGLAVTAVAVSPAGDELAVGLRNGDVKLHGLPKLDFKSMLTRFTAPVLGLAYGMKDGDVI 126
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BLAST of mRNA_H-paniculata_contig17957.4321.1 vs. uniprot
Match: A0A6H5KUW1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUW1_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 2.830e-23
Identity = 63/118 (53.39%), Postives = 76/118 (64.41%), Query Frame = 0 
Query:    1 MDAIATEKDGTRIFIAGGEGMMKE----------FDLKT---QNFVREIELDVDDTSDEGFAGTALAISPDGKELALGLVNGHVNLYDLPSLEFKSILVRFTAPVLDLDYGM-GGEVM 104
            MDA AT  DG RIF  G EG +K           FD K+   Q+ V E+ LDV+D  DEG A TA+A+SP G ELA+GL NG V L+ LP L+FKS+L RFTAPVL L YGM  G+V+
Sbjct:   20 MDA-ATTSDGLRIFAGGAEGTVKVGAKPGDGEAVFDPKSSSIQDAVAELNLDVNDDGDEGLAVTAVAVSPAGDELAVGLRNGDVKLHGLPKLDFKSMLTRFTAPVLGLAYGMKDGDVI 136
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17957.4321.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G152_ECTSI1.570e-2659.26Mcl1_mid domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KUW1_9PHAE2.830e-2353.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..103
e-value: 6.0E-9
score: 37.2
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 5..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17957contigH-paniculata_contig17957:1016..2870 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17957.4321.1mRNA_H-paniculata_contig17957.4321.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17957 1016..2870 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17957.4321.1 ID=prot_H-paniculata_contig17957.4321.1|Name=mRNA_H-paniculata_contig17957.4321.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=105bp
MDAIATEKDGTRIFIAGGEGMMKEFDLKTQNFVREIELDVDDTSDEGFAG
TALAISPDGKELALGLVNGHVNLYDLPSLEFKSILVRFTAPVLDLDYGMG
GEVM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf