mRNA_H-paniculata_contig17941.4315.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig17941.4315.1
Unique NamemRNA_H-paniculata_contig17941.4315.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig17941.4315.1 vs. uniprot
Match: D7G2K6_ECTSI (P4Hc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K6_ECTSI)

HSP 1 Score: 224 bits (570), Expect = 1.050e-67
Identity = 102/117 (87.18%), Postives = 110/117 (94.02%), Query Frame = 2 
Query:    5 VGRYYTSQKYANHWDAFDLSTEDGMRFAQNGGQRVCTVLVYLNDVASGGCTAFPRLGLRVQPKKGMAVMFFPATLDGTLDPMLLHAAEPAVDTKWVSQIWIRQGDYHGSPTARIPRI 355
            VGRYYTSQKYANHWDAFDL+TEDG RFAQNGGQRVCTVLVYLNDV SGGCTAFP+LG++VQP+KGMAV+FFPATLDG LD  LLHAAEPA+DTKWVSQIWIRQG YHG+PTARIP I
Sbjct:  178 VGRYYTSQKYANHWDAFDLNTEDGRRFAQNGGQRVCTVLVYLNDVPSGGCTAFPQLGMKVQPRKGMAVVFFPATLDGVLDSRLLHAAEPAIDTKWVSQIWIRQGAYHGTPTARIPAI 294
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BLAST of mRNA_H-paniculata_contig17941.4315.1 vs. uniprot
Match: A0A835YJM0_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJM0_9STRA)

HSP 1 Score: 171 bits (434), Expect = 2.340e-48
Identity = 82/116 (70.69%), Postives = 93/116 (80.17%), Query Frame = 2 
Query:    5 VGRYYTSQKYANHWDAFDLSTEDGMRFAQNGGQRVCTVLVYLNDVASGGCTAFPRLGLRVQPKKGMAVMFFPATLDGTLDPMLLHAAEPAVDTKWVSQIWIRQGDYHGSPTARIPR 352
            VGRY  +Q YA H DAFDL T+DGMRFAQNGGQRV TVL+YLNDV  GG T+FPRLGL V P++GMAV+FFP+TLDG  D + LH AEPAVD K+VSQIWIRQG Y G PT R+ R
Sbjct:  101 VGRYLPTQFYAPHLDAFDLKTQDGMRFAQNGGQRVATVLIYLNDVPRGGNTSFPRLGLSVTPRRGMAVVFFPSTLDGCADELALHTAEPAVDVKYVSQIWIRQGLYTGEPTRRLLR 216
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BLAST of mRNA_H-paniculata_contig17941.4315.1 vs. uniprot
Match: A0A7S1UYE3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UYE3_9STRA)

HSP 1 Score: 176 bits (446), Expect = 5.580e-48
Identity = 80/116 (68.97%), Postives = 95/116 (81.90%), Query Frame = 2 
Query:    5 VGRYYTSQKYANHWDAFDLSTEDGMRFAQNGGQRVCTVLVYLNDVASGGCTAFPRLGLRVQPKKGMAVMFFPATLDGTLDPMLLHAAEPAVDTKWVSQIWIRQGDYHGSPTARIPR 352
            VGRY+ SQ+Y  H+DAFDLS EDG RFA NGGQR  TVLVYLNDV  GG T+FP L L VQP++GMA++FFPAT+DG LD M LHAA PAVDTK+VSQ+WIRQG+Y G P+ R+P+
Sbjct:  271 VGRYFPSQQYLQHFDAFDLSNEDGRRFASNGGQRTVTVLVYLNDVHQGGATSFPALNLDVQPRRGMAIVFFPATVDGYLDKMALHAANPAVDTKYVSQVWIRQGEYKGQPSKRLPQ 386
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BLAST of mRNA_H-paniculata_contig17941.4315.1 vs. uniprot
Match: A0A7S3KY14_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KY14_9STRA)

HSP 1 Score: 172 bits (437), Expect = 2.170e-46
Identity = 80/115 (69.57%), Postives = 92/115 (80.00%), Query Frame = 2 
Query:    5 VGRYYTSQKYANHWDAFDLSTEDGMRFAQNGGQRVCTVLVYLNDVASGGCTAFPRLGLRVQPKKGMAVMFFPATLDGTLDPMLLHAAEPAVDTKWVSQIWIRQGDYHGSPTARIP 349
            VGRY  SQ+Y  H+DAFDLSTEDG RFA NGGQR  TVL+YLNDV  GG T FP L L VQP +GMA++FFPAT+DG LD M LHAA PAVDTK+VSQ+WIRQG Y+G P+ R+P
Sbjct:  281 VGRYMASQQYLQHYDAFDLSTEDGRRFASNGGQRTITVLIYLNDVHQGGATRFPALNLDVQPVRGMALIFFPATIDGMLDQMSLHAALPAVDTKYVSQVWIRQGSYNGQPSKRLP 395
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BLAST of mRNA_H-paniculata_contig17941.4315.1 vs. uniprot
Match: A0A8J9TA93_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TA93_PHATR)

HSP 1 Score: 164 bits (416), Expect = 4.520e-46
Identity = 76/106 (71.70%), Postives = 88/106 (83.02%), Query Frame = 2 
Query:    5 VGRYYTSQKYANHWDAFDLSTEDGMRFAQNGGQRVCTVLVYLNDVASGGCTAFPRLGLRVQPKKGMAVMFFPATLDGTLDPMLLHAAEPAVDTKWVSQIWIRQGDY 322
            VGRY+ SQ+Y  H+DAFDL TEDG+RFA NGGQR  TVL+YLNDVA GG T FP L L VQP++GMA++FFPAT+DG LD M LHAA PAVDTK+VSQ+WIRQG Y
Sbjct:   83 VGRYFPSQQYLQHYDAFDLGTEDGLRFAANGGQRTITVLLYLNDVARGGATRFPALNLDVQPRQGMALVFFPATIDGMLDRMALHAAMPAVDTKYVSQVWIRQGHY 188
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BLAST of mRNA_H-paniculata_contig17941.4315.1 vs. uniprot
Match: A0A1Z5JHE4_FISSO (P4Hc domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JHE4_FISSO)

HSP 1 Score: 166 bits (420), Expect = 8.790e-46
Identity = 78/126 (61.90%), Postives = 97/126 (76.98%), Query Frame = 2 
Query:    5 VGRYYTSQKYANHWDAFDLSTEDGMRFAQNGGQRVCTVLVYLNDVASGGCTAFPRLGLRVQPKKGMAVMFFPATLDGTLDPMLLHAAEPAVDTKWVSQIWIRQGDYHGSPTARIPRI*KIGDKISV 382
            VGRY+  +KY  H+DAFDLSTEDG RFA NGGQR  TVL+YLNDV  GG T FP L L +QP++GMA++FFPAT+DG LD M LHAA PA+DTK+VSQ+WIRQ  Y+G P+ R+ +   +G  IS+
Sbjct:  100 VGRYFYQEKYLQHFDAFDLSTEDGRRFAANGGQRTVTVLIYLNDVMRGGATRFPALNLDIQPRRGMALVFFPATVDGMLDKMALHAALPAIDTKFVSQVWIRQSIYNGQPSKRLQQT--LGAPISL 223
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BLAST of mRNA_H-paniculata_contig17941.4315.1 vs. uniprot
Match: A0A6U3RVV9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RVV9_9STRA)

HSP 1 Score: 170 bits (430), Expect = 2.180e-45
Identity = 83/129 (64.34%), Postives = 99/129 (76.74%), Query Frame = 2 
Query:    5 VGRYYTSQKYANHWDAFDLSTEDGMRFAQNGGQRVCTVLVYLNDVASGGCTAFPRLGLRVQPKKGMAVMFFPATLDGTLDPMLLHAAEPAVDTKWVSQIWIRQGDYHGSPTARI-PRI*KIGDKISVLS 388
            VGRY  SQ+Y  H+DAFDLS EDG RFA NGGQR  TVLVYLNDV+ GG TAFP L + VQPK+GMA++FFPAT+DG LD M LHAA PAVD K+VSQ+WIRQG+Y G P+ RI P   ++  ++ V S
Sbjct:  275 VGRYLPSQQYLQHFDAFDLSNEDGRRFASNGGQRTVTVLVYLNDVSRGGQTAFPSLNIEVQPKQGMALVFFPATVDGYLDKMALHAALPAVDPKYVSQVWIRQGNYEGQPSKRIHPHQQQMAQQLGVSS 403
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BLAST of mRNA_H-paniculata_contig17941.4315.1 vs. uniprot
Match: A0A8J2S9J3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S9J3_9STRA)

HSP 1 Score: 164 bits (416), Expect = 2.180e-45
Identity = 79/117 (67.52%), Postives = 91/117 (77.78%), Query Frame = 2 
Query:    5 VGRYYTSQKYANHWDAFDLSTEDGMRFAQNGGQRVCTVLVYLNDVASGGCTAFPRLGLRVQPKKGMAVMFFPATLDGTLDPMLLHAAEPAVDTKWVSQIWIRQGDYHGSPTARIPRI 355
            VGRY   + Y  H+DAFD S+ DG RFAQNGGQRV TVLVYLNDVA GGCT+F +LGL +QPKKG A++FFPA+LDG LD   LHAAEPA+D KWVSQIWIRQ  Y+G  + RI  I
Sbjct:  125 VGRYRGGEFYKAHYDAFDTSSPDGRRFAQNGGQRVATVLVYLNDVARGGCTSFSKLGLSIQPKKGTALVFFPASLDGMLDQHYLHAAEPALDLKWVSQIWIRQKAYNGLASVRIAPI 241
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BLAST of mRNA_H-paniculata_contig17941.4315.1 vs. uniprot
Match: A0A6U0TVS1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0TVS1_9STRA)

HSP 1 Score: 167 bits (424), Expect = 3.230e-45
Identity = 76/114 (66.67%), Postives = 95/114 (83.33%), Query Frame = 2 
Query:    5 VGRYYTSQKYANHWDAFDLSTEDGMRFAQNGGQRVCTVLVYLNDVASGGCTAFPRLGLRVQPKKGMAVMFFPATLDGTLDPMLLHAAEPAVDTKWVSQIWIRQGDYHGSPTARI 346
            VGRY  +Q+Y  H+DAFDLS+EDG RFA NGGQR  T+LVYLNDV++GG T FPRL ++VQP++GMA++FFPAT+DGTLD M LHAA PAVD K+VSQ+WIRQ +Y G P+ R+
Sbjct:  195 VGRYLPTQQYLQHFDAFDLSSEDGRRFASNGGQRTITILVYLNDVSTGGNTVFPRLNIQVQPRRGMALVFFPATVDGTLDKMTLHAALPAVDVKYVSQVWIRQTNYDGVPSKRL 308
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BLAST of mRNA_H-paniculata_contig17941.4315.1 vs. uniprot
Match: A0A7S0CAB3_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CAB3_9STRA)

HSP 1 Score: 164 bits (416), Expect = 1.050e-44
Identity = 80/125 (64.00%), Postives = 98/125 (78.40%), Query Frame = 2 
Query:    5 VGRYYTSQKYANHWDAFDLSTEDGMRFAQNGGQRVCTVLVYLNDVA--SGGCTAFPRLG------LRVQPKKGMAVMFFPATLDGTLDPMLLHAAEPAVDTKWVSQIWIRQGDYHGSPTARIPRI 355
            VGRYY SQ+Y +H+DAFDL   DG RFA+NGGQRV TVLVYLND+A   GGCTAFPRL       LRV+P++G A++FFPA++DG LD   LHAAEPA+DTK+VSQ+WIRQG+Y G PT R+  +
Sbjct:  103 VGRYYPSQQYRSHYDAFDLDDVDGRRFAENGGQRVVTVLVYLNDLAVGRGGCTAFPRLKTSSGEVLRVRPERGKAIVFFPASVDGLLDTDALHAAEPALDTKYVSQVWIRQGEYKGVPTKRLASV 227
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17941.4315.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2K6_ECTSI1.050e-6787.18P4Hc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835YJM0_9STRA2.340e-4870.69Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A7S1UYE3_9STRA5.580e-4868.97Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S3KY14_9STRA2.170e-4669.57Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A8J9TA93_PHATR4.520e-4671.70Hypothetical protein (Fragment) n=2 Tax=Phaeodacty... [more]
A0A1Z5JHE4_FISSO8.790e-4661.90P4Hc domain-containing protein n=2 Tax=Fistulifera... [more]
A0A6U3RVV9_9STRA2.180e-4564.34Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A8J2S9J3_9STRA2.180e-4567.52Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6U0TVS1_9STRA3.230e-4566.67Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S0CAB3_9STRA1.050e-4464.00Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17941contigH-paniculata_contig17941:1744..4745 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score175.6
Seed ortholog evalue1.1e-41
Seed eggNOG ortholog2880.D7G2K6
KEGG rclassRC00478
KEGG koko:K00472
KEGG ReactionR01252
KEGG Pathwayko00330,ko01100,map00330,map01100
Hectar predicted targeting categoryother localisation
EggNOG free text desc.procollagen-proline 4-dioxygenase activity
EggNOG OGsKOG1591@1,KOG1591@2759
EC1.14.11.2
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons2
Model size1072
Cds size282
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17941.4315.1prot_H-paniculata_contig17941.4315.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig17941 2458..4669 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929401.1317887-UTR-H-paniculata_contig17941:1743..24571622929401.1317887-UTR-H-paniculata_contig17941:1743..2457Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17941 1744..2457 -
1691480844.86221-UTR-H-paniculata_contig17941:1743..24571691480844.86221-UTR-H-paniculata_contig17941:1743..2457Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17941 1744..2457 -
1622929401.1761029-UTR-H-paniculata_contig17941:4669..47451622929401.1761029-UTR-H-paniculata_contig17941:4669..4745Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17941 4670..4745 -
1691480844.90614-UTR-H-paniculata_contig17941:4669..47451691480844.90614-UTR-H-paniculata_contig17941:4669..4745Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17941 4670..4745 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929401.1459687-CDS-H-paniculata_contig17941:2457..26181622929401.1459687-CDS-H-paniculata_contig17941:2457..2618Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17941 2458..2618 -
1691480844.8821096-CDS-H-paniculata_contig17941:2457..26181691480844.8821096-CDS-H-paniculata_contig17941:2457..2618Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17941 2458..2618 -
1622929401.1574228-CDS-H-paniculata_contig17941:4548..46691622929401.1574228-CDS-H-paniculata_contig17941:4548..4669Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17941 4549..4669 -
1691480844.8945518-CDS-H-paniculata_contig17941:4548..46691691480844.8945518-CDS-H-paniculata_contig17941:4548..4669Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17941 4549..4669 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig17941.4315.1

>prot_H-paniculata_contig17941.4315.1 ID=prot_H-paniculata_contig17941.4315.1|Name=mRNA_H-paniculata_contig17941.4315.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=94bp
MRFAQNGGQRVCTVLVYLNDVASGGCTAFPRLGLRVQPKKGMAVMFFPAT
LDGTLDPMLLHAAEPAVDTKWVSQIWIRQGDYHGSPTARIPRI*
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mRNA from alignment at H-paniculata_contig17941:1744..4745-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig17941.4315.1 ID=mRNA_H-paniculata_contig17941.4315.1|Name=mRNA_H-paniculata_contig17941.4315.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3002bp|location=Sequence derived from alignment at H-paniculata_contig17941:1744..4745- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTAGGTTGGGCGGTACTACACCAGCCAGAAGTACGCCAACCACTGGGATG
CTTTTGACCTAAGCACCGAGGACGGGATGAGATTCGCGCAGAACGGCGGG
CAGCGAGTGTGCACGGTTCTGGTTTATCTCAACGATGTAGCGTCGGGCGG
ATGCACGGCGTTCCCGAGGCTGGGTCTGAGAGTTCAGCCGAAGAAAGGCA
AGTACGAGTAACTGTGCATTCTCGTGTGAATAAATATGGAGGAAATGCCG
CCCTCTCTCTCCCCCCCTCCCCCCATGAATTGCTGTAGAGCAGGTAATCA
ACGGTCAACGGAAAGTAGATGAAATCCCGTATTGCTCGGGGAAACCGCAC
GGGGATGCGGATGTTTATTAAGGGCTTACCGTAAAGGTCGAAGAGAGCGC
CCCCAATGGCGTGTTCTTTTTTCAAGCTCAATTTTCTTGAAAGGTACGAT
GCCAGTGATACTGAAAGTTGGTTGGTTGGAAGGTCTCTTCGAGATCTGTT
GATGGACGTGCTCGTTCAACTGTCGGGGGGGGGGAGGGAGGTTCTCTCCG
ACCTTGACGGTAATGCGAGACAGGAGAGGACGAGGAGGTAATGGGACAGG
ATGAGAGGGGACCTGATTTATACTTTATTAATGTATTGGACGGAACCCTA
CATGATTCCGTCCTGTCCTTTTCAAGAAAACGACGGCGGACGGAATAAGT
GGGGTTCATATATATATATATATATTACTCATAGCATTAAAACACCATTC
AGTCAACGTCGTGTATAGAATCAGAACTGCGCAAGTATAACCTCAAGTAT
CGTCTAACCTGTTTTACATGTTTTTTGGGGTCATCTCATGTTTTCGTATT
TCATGGGCCGGAATATTACCGGATTGGACCCACCGGTCCCCTTGATGAAA
CTACAACGGGACGGGCCGGGAATTATCATGTTGCGTTCCGTCCCGTGAGC
GTCCCGTGGTCCCCTGTATCAAGACCCGAACGTTTTCAAAGGTGATTATC
TCAAGAACAGAGACCTTGCGTGGCCGAAAGAGCTTGTTAATTGGCCGATC
TCAGCGAGATCTTTTCCAACGACGCATATTTCGTTGTCAGCAGTGCCGTG
AAGTACTTTTAGTTTGTGGTTTGTAGCCATAGTCTCGTTTGAAAAATGTT
CGAACCCCGGTGCGGTTTCCCCGGGTAAGATGGTAGATTGGGCGATTAGC
CTATGGAAGGAAGTATCGGATGACATAGTAGCCTGTAAAGCGGGGTTGGA
CCATGGCTCGCAAAAAAGGTTATATTCATCATTAGATTGTGATCAGTTCT
GAGATGGTTTCATCAGACATGAAATTGATGAACAAATGATGATAATTAGT
TATTTCGGTTAAAATAAAGGTGACTGACTGACTGGTTTGGAGCATAAGCA
CGCACAAGTGTGAATGATGATAATTAGTTATTTCGGTTAAAATAAAGGTG
AGTGACTGACTGGTTTGGAGCATAAGCACGTACAAGTGTTAGCGTTTTTA
TGTCTTTTTAGGGTTTGACTGGGGGCAGTGTTTGTCTAGATTTTTTTTTT
TTCACTATAATTTATCTATAATTTGGTGGGGCCCTTGATATGGGATATGA
TATTAGAGGGATTCTTGTGTAAGAGAAAATATAACCAACGGCATCAATGA
CAGTATCATGAGTACTTCATTTTGAAGCGTTTCTAATTTTTAGTGTTTCA
ATTTTGTTTGTCCAGTTCGCCGGGTTTTTTTTTAATTTGTGGAAACACAG
CTCAACAACCTCATTCATTGTTGTGGGTTACGCAGTTTGTATGGCGCCTC
CTTTCTCTGACGTGCAGGCCTTGCGAAGTCAGTTGCCCCTCCCTCCCCTT
CCCCCCCAAGCTCTGGCCTCTTAAGGACGCGTAGTCCATGGCCTAACAAC
TACGGTATGCGAAATATGGGTACGCTACACACACACACACACACACACAC
ACACACACACACACACACACGACTCCCGGAGGGATTGGTCATTAGTGATG
GCTCTTGGATGAACAGTCCTCGGTCCTCTCGAGGATGCACAGTGAATGGT
CCAACAGCCAAAATATGAAAAGCATGACGAGCCCACCCACCCACCGCCGC
TCTCCTTCCGTGATGGTCATGTTCCAGGCATGGCCGTGATGTTTTTCCCG
GCCACACTCGATGGGACCTTGGACCCCATGCTCCTCCACGCGGCGGAACC
GGCGGTGGACACCAAATGGGTGTCACAGATATGGATAAGGCAGGGGGATT
ACCACGGTTCGCCAACAGCTAGGATCCCCCGCATATAAAAAATAGGGGAC
AAAATCAGTGTCCTCTCTGTTGGAGGGCGATTACTGCGCTTGTTCGTACG
ACAATACTGTCTGGGTTTGGTTTGGTTGAATTTTGGTGTTGGTTTTGGTT
GGTGTAGTGGCAAAGCGACGGGTGCCTCGGTGCATGGTGAGGGTTTGCGT
TTTGGGGTGTAGTATAATACGGTAAGTGGCACCTACCTCCCGGGTAACTA
CGTGTGGTAGGTGGTGGAGTATCAATGGGGTTGCCCTAAAAATAAGGCGC
TCTTGTGCCACTGGAGCTATATACACCGTGTGCTGTACGCCATACCAATG
GAGCGATTATGTCGAGGGTATTGATTTGCTGTCCAAAGTAGAGTGATTCG
GGCGCTTGTGTGGGTACCGGCTATTAGTAGAGGCTAACTCGTTGCTATTA
TCTCGATATATATATATACTGAATATACTCGGTACTGGGGCAAAAATGGG
TAGCAACATTGGTCGGCCCAGTACCTGTCATCTCGATATATATATATATA
TATATTGAATATACTCGATAATTGGTTGCTTTAGGTACCAGGAACGCCGA
GAGCCGTTCGTGGAACGGTCCTAGCGCCGTTTTTGTGTATTTTTGTGTAT
TTTTTGTCTTTCATAAACGAAGAGTCGTTGTTACGTGGGCCATAGTTGGG
GTTGAGACTGTCTCAACTTACTTTATTTAGCGTATGCGCGCGTGCCTGGG
GG
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Coding sequence (CDS) from alignment at H-paniculata_contig17941:1744..4745-

>mRNA_H-paniculata_contig17941.4315.1 ID=mRNA_H-paniculata_contig17941.4315.1|Name=mRNA_H-paniculata_contig17941.4315.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=564bp|location=Sequence derived from alignment at H-paniculata_contig17941:1744..4745- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGATTCGCGCAGAACGGCGGGCAGCGAGTGTGCACGGTTCTGGTTTA
TCTCAACGATGTAGCGTCGGGCGGATGCACGGCGTTCCCGAGGCTGGGTC
TGAGAGTTCAGCCGAAGAAAGATGAGATTCGCGCAGAACGGCGGGCAGCG
AGTGTGCACGGTTCTGGTTTATCTCAACGATGTAGCGTCGGGCGGATGCA
CGGCGTTCCCGAGGCTGGGTCTGAGAGTTCAGCCGAAGAAAGGCATGGCC
GTGATGTTTTTCCCGGCCACACTCGATGGGACCTTGGACCCCATGCTCCT
CCACGCGGCGGAACCGGCGGTGGACACCAAATGGGTGTCACAGATATGGA
TAAGGCAGGGGGATTACCACGGTTCGCCAACAGCTAGGATCCCCCGCATA
TAAGCATGGCCGTGATGTTTTTCCCGGCCACACTCGATGGGACCTTGGAC
CCCATGCTCCTCCACGCGGCGGAACCGGCGGTGGACACCAAATGGGTGTC
ACAGATATGGATAAGGCAGGGGGATTACCACGGTTCGCCAACAGCTAGGA
TCCCCCGCATATAA
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