prot_H-paniculata_contig1794.4312.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1794.4312.1
Unique Nameprot_H-paniculata_contig1794.4312.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length137
Homology
BLAST of mRNA_H-paniculata_contig1794.4312.1 vs. uniprot
Match: A0A6H5JP85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP85_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 3.500e-21
Identity = 49/125 (39.20%), Postives = 71/125 (56.80%), Query Frame = 0
Query:    1 MIYYGARVVTDYVILALEPIRKPLFKMPLRHSPWSAGIHVAIAVAGWRFHRATLSSEQTRRVWGEMLPWLLPWVSTPSVNTFACGQGMLGVLEPVVRLAKKISDSLNTFHVTSCNFIDDPAEAMQ 125
            M+YYGARVVTDYV+L  EP R+ L +M + H+PWSA IH  + + G+  HR  L + +                  P ++  A G G +G++EPVVR A KIS+ L+      C F++DP E ++
Sbjct:  481 MVYYGARVVTDYVVLVTEPARRKLGQMTIVHTPWSAVIHAGLTILGYCCHRNVLYTAEV-----------------PGLHPLAVGPGAVGLVEPVVRFAVKISEILSHIEFFKCKFVEDPVEMVK 588          
BLAST of mRNA_H-paniculata_contig1794.4312.1 vs. uniprot
Match: D8LTP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP1_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 2.190e-20
Identity = 47/125 (37.60%), Postives = 70/125 (56.00%), Query Frame = 0
Query:    1 MIYYGARVVTDYVILALEPIRKPLFKMPLRHSPWSAGIHVAIAVAGWRFHRATLSSEQTRRVWGEMLPWLLPWVSTPSVNTFACGQGMLGVLEPVVRLAKKISDSLNTFHVTSCNFIDDPAEAMQ 125
            M+YYG RVVTDYV+L  EP R+ L +M + H+PWSA IH  + + G+  HR+ L + +                  P ++  A G G +G++EPVVR A KIS+ L+      C F+ DP + ++
Sbjct:  274 MVYYGGRVVTDYVVLFTEPARRKLGQMTIVHTPWSAVIHAGLTILGYYCHRSALYTAEI-----------------PGLHPLAVGPGAVGLVEPVVRFAVKISEILSDIEFFRCKFVQDPVQMVK 381          
BLAST of mRNA_H-paniculata_contig1794.4312.1 vs. uniprot
Match: A0A6H5JS93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS93_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 1.500e-14
Identity = 41/117 (35.04%), Postives = 62/117 (52.99%), Query Frame = 0
Query:    1 MIYYGARVVTDYVILALEPIRKPLFKMPLRHSPWSAGIHVAIAVAGWRFHRATLSSEQTRRVWGEMLPWLLPWVSTPSVNTFACGQGMLGVLEPVVRLAKKISDSLNTFHVTSCNFI 117
            MIY+GARVVTDY+++  EPIR+ L  M   H+PWS  I   + V G+ +HR TL +                  S    +    G G +G++EP+VR+A  +S+ L+     + NF+
Sbjct:  146 MIYFGARVVTDYLVMVAEPIRRKLGLMTAVHTPWSGLIQAGLTVLGFSYHRHTLHT-----------------ASVTGFHPLVVGPGAVGLVEPLVRVAVWVSEVLHRIEFFTVNFV 245          
BLAST of mRNA_H-paniculata_contig1794.4312.1 vs. uniprot
Match: D8LTP3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP3_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 3.640e-14
Identity = 40/117 (34.19%), Postives = 63/117 (53.85%), Query Frame = 0
Query:    1 MIYYGARVVTDYVILALEPIRKPLFKMPLRHSPWSAGIHVAIAVAGWRFHRATLSSEQTRRVWGEMLPWLLPWVSTPSVNTFACGQGMLGVLEPVVRLAKKISDSLNTFHVTSCNFI 117
            M+Y+GARVVTDY+++  EPIR+ L  M   H+PWS  I   + V G+ +HR TL +                  S    +    G G++G++EP+VR+A  +S+ L+     + NF+
Sbjct:  281 MVYFGARVVTDYLVMTAEPIRRKLGLMTAVHTPWSGMIQAGLTVLGFYYHRHTLHT-----------------ASVTGFHPLVVGPGVVGLVEPLVRVAVWVSEVLHRIEFFTVNFV 380          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1794.4312.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JP85_9PHAE3.500e-2139.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTP1_ECTSI2.190e-2037.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JS93_9PHAE1.500e-1435.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTP3_ECTSI3.640e-1434.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1794contigH-paniculata_contig1794:4545..7263 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1794.4312.1mRNA_H-paniculata_contig1794.4312.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1794 3789..8005 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1794.4312.1 ID=prot_H-paniculata_contig1794.4312.1|Name=mRNA_H-paniculata_contig1794.4312.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=137bp
MIYYGARVVTDYVILALEPIRKPLFKMPLRHSPWSAGIHVAIAVAGWRFH
RATLSSEQTRRVWGEMLPWLLPWVSTPSVNTFACGQGMLGVLEPVVRLAK
KISDSLNTFHVTSCNFIDDPAEAMQAIAKTVARKAK*
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