prot_H-paniculata_contig17938.4311.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17938.4311.1
Unique Nameprot_H-paniculata_contig17938.4311.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length151
Homology
BLAST of mRNA_H-paniculata_contig17938.4311.1 vs. uniprot
Match: D8LBV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBV9_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 5.690e-71
Identity = 120/145 (82.76%), Postives = 130/145 (89.66%), Query Frame = 0
Query:    6 QGSWTSGLEIFRLLLEDLRPRRLSPSQPTWKSLARGLRSTGQADQAVSVLRQALEGGVKGIDEQVCSILLDLCAVKGRMGLAEEISSLMDTHSIRKGPVTFCVMLKGYGRQQRLGRVLEVMQEMKTRGVVPDVVALNAAVDAFVR 150
            QGSWTSGLE+FRLLLEDLRPR LSP Q TW+SLARGLRS GQADQA+ VLRQAL  GV GIDEQVCSILLDLCAVKGRMGLAEEI+SLM+TH I KGPVT+CV+LKGYGRQ+RLG V   M+EMK RG+VPDVVALNAAVDAFVR
Sbjct:   23 QGSWTSGLEVFRLLLEDLRPRGLSPKQSTWRSLARGLRSVGQADQALVVLRQALRAGVGGIDEQVCSILLDLCAVKGRMGLAEEIASLMETHRIPKGPVTYCVLLKGYGRQRRLGGVESTMREMKERGIVPDVVALNAAVDAFVR 167          
BLAST of mRNA_H-paniculata_contig17938.4311.1 vs. uniprot
Match: A0A6H5L7F1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F1_9PHAE)

HSP 1 Score: 233 bits (595), Expect = 2.650e-68
Identity = 118/145 (81.38%), Postives = 128/145 (88.28%), Query Frame = 0
Query:    6 QGSWTSGLEIFRLLLEDLRPRRLSPSQPTWKSLARGLRSTGQADQAVSVLRQALEGGVKGIDEQVCSILLDLCAVKGRMGLAEEISSLMDTHSIRKGPVTFCVMLKGYGRQQRLGRVLEVMQEMKTRGVVPDVVALNAAVDAFVR 150
            QGSWTSGLE+FRLLLEDLRPR LSP Q TW+SLARGLRS GQADQA+ VLRQAL  GV GIDEQVCSILLDLCAVKGRMGLAEEI+SLM+TH I KGPVT+CV+LKGYGRQ+RL  V   M+EMK RG+VPDVVALNAAVDA VR
Sbjct:  486 QGSWTSGLEVFRLLLEDLRPRGLSPKQSTWRSLARGLRSAGQADQALVVLRQALRAGVGGIDEQVCSILLDLCAVKGRMGLAEEIASLMETHRIPKGPVTYCVLLKGYGRQRRLRGVESTMREMKERGIVPDVVALNAAVDALVR 630          
BLAST of mRNA_H-paniculata_contig17938.4311.1 vs. uniprot
Match: A0A835YV31_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV31_9STRA)

HSP 1 Score: 121 bits (303), Expect = 5.090e-29
Identity = 67/156 (42.95%), Postives = 88/156 (56.41%), Query Frame = 0
Query:    7 GSWTSGLEIFRLLLEDLRPRRLSPSQPTWKSLARGLRSTGQADQAVSVLRQALEGGVKG------------IDEQVCSILLDLCAVKGRMGLAEEISSLMDTHSIRKGPVTFCVMLKGYGRQQRLGRVLEVMQEMKTRGVVPDVVALNAAVDAFVR 150
            G W + L+ F   LE +R     P   T+++L RGL+  GQ D A ++L  AL G                 DEQ+CS++LDLCA  GRM LAE I   M    +  G VT C+++KGYGRQ+R  RV   ++ M+   V PDVV LNAAVDA+VR
Sbjct:   24 GDWRAALKAFERYLEGVRSAGALPPLATFRTLVRGLQKAGQVDAAAAILHIALRGASSSSSSGAAAPSLPVADEQLCSVVLDLCAETGRMTLAETIVDAMHDRGVPAGNVTHCILVKGYGRQRRAHRVDAALRGMRRARVAPDVVTLNAAVDAYVR 179          
BLAST of mRNA_H-paniculata_contig17938.4311.1 vs. uniprot
Match: A0A836CQL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQL2_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.350e-19
Identity = 57/154 (37.01%), Postives = 76/154 (49.35%), Query Frame = 0
Query:    7 GSWTSGLEIFRLLLEDLRPRRLSPSQPTWKSLARGLRSTGQADQAVSVLRQALEG----------GVKGIDEQVCSILLDLCAVKGRMGLAEEISSLMDTHSIRKGPVTFCVMLKGYGRQQRLGRVLEVMQEMKTRGVVPDVVALNAAVDAFVR 150
            G W  GL+ F   LE    +   P   +++ + RGL    Q D AV+VL  AL G          G    D ++C ++LDLCA K RMGLAE + + M    +    V +C+++KGYGRQ                   PDVV LNAAVDA+VR
Sbjct:  148 GQWRLGLKAFEHHLESAESQGRLPPLASFRLVIRGLYGARQPDPAVAVLHVALRGAPSSSGGGSGGAAVADPELCCLVLDLCADKRRMGLAEGVVAAMARARVTLSAVAYCILIKGYGRQXXXXXXXXXXXXXXXXXXXPDVVTLNAAVDAYVR 301          
BLAST of mRNA_H-paniculata_contig17938.4311.1 vs. uniprot
Match: A0A7S0LHA5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LHA5_9EUKA)

HSP 1 Score: 73.6 bits (179), Expect = 2.400e-12
Identity = 46/126 (36.51%), Postives = 66/126 (52.38%), Query Frame = 0
Query:   28 LSPSQPTWKSLARGLR-STGQADQAVSVLRQALEGGVKGID--EQVCSILLDLCAVKGRMGLAEEISSLMDTHSIRKGPVTFCVMLKGYGRQQRLGRVLEVMQEMKTRGVVPDVVALNAAVDAFVR 150
            LSP   +  SL    R S+G     VS+ R   +   K     E + SI+L+ CA  GRM L+E + + M  H +    +TFC+++KGYGR   + RV  +   M+ R V PD+   NA +DA VR
Sbjct:   98 LSPQWHSDSSLQSSKRHSSGIGTVVVSMSRNQAQPSAKRSTKMEGLASIVLNGCAEAGRMDLSESVLTTMHEHEVSITALTFCILIKGYGRVADIPRVRRIYSTMRRRSVAPDLATFNALLDAIVR 223          
BLAST of mRNA_H-paniculata_contig17938.4311.1 vs. uniprot
Match: A0A7S2SBE2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SBE2_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 5.120e-12
Identity = 43/113 (38.05%), Postives = 67/113 (59.29%), Query Frame = 0
Query:   40 RGLRSTGQADQAVSVLRQALEGGVKG--IDEQVCSILLDLCAVKGRMGLAEEISSLMDTHSIRKGPVTFCVMLKGYGRQQRLGRVLEVMQEMKTRGVVPDVVALNAAVDAFVR 150
            R L +TG+  +A+ VL   +E  V G  I E+   ++L+ CA    M  A E+ +LM T  + +  VT+C+++KGYGR      V  ++ +M+  GV  DV+ LNAA+DA+VR
Sbjct:   11 RELAATGRCGEAIEVLGMLVED-VDGDHIPERAFGMVLNTCADSHHMDRAPEVLALMATAGVPRTEVTYCILIKGYGRLGSDQAVDHLLADMRKHGVKLDVITLNAAMDAYVR 122          
BLAST of mRNA_H-paniculata_contig17938.4311.1 vs. uniprot
Match: A0A0M0K4N5_9EUKA (Pentatricopeptide repeat-containing n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K4N5_9EUKA)

HSP 1 Score: 64.7 bits (156), Expect = 2.750e-9
Identity = 36/90 (40.00%), Postives = 55/90 (61.11%), Query Frame = 0
Query:   27 RLSPSQPTWKSLARGLRSTGQADQAVSVLRQALEGGVKGID-EQVCSILLDLCAVKGRMGLAEEISSLMDTHSIRKGPVTFCVMLKGYGR 115
            R SP++   +++  GL STGQ + A+S+L   L    +G D E + SI+L+ CA  GRM L   + + M  H +  G +TFC+++KGYGR
Sbjct:   89 RASPAEI--RAMLNGLCSTGQLEPAISLLAHRLATSARGSDAEGLSSIVLNACANAGRMDLTRGVLTAMREHHVPIGLLTFCILIKGYGR 176          
BLAST of mRNA_H-paniculata_contig17938.4311.1 vs. uniprot
Match: A0A834Z287_9MAGN (DYW_deaminase domain-containing protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834Z287_9MAGN)

HSP 1 Score: 62.0 bits (149), Expect = 2.580e-8
Identity = 39/145 (26.90%), Postives = 72/145 (49.66%), Query Frame = 0
Query:    3 FSTQGSWTSGLEIFRLLLEDLRPRRLSPSQPTWKSLARGLRSTGQADQAVSVLRQALEGGVKGIDEQVCSILLDLCAVKGRMGLAEEISSLMDTHSIRKGPVTFCVMLKGYGRQQRLGRVLEVMQEMKTRGVVPDVVALNAAVDA 147
            +   G+     EIF      ++   + P+Q T+ S+ R   S G  D    +  Q ++ G + ++  VCS+L+D+ A  GR+G+A EI   +      K  V++  M+ G+ +       L + +EM+ RG+ PD +  ++A+ A
Sbjct:  478 YGQMGNLRESFEIF----SQMQVVGMRPNQYTYPSILRTCTSLGALDLGEQIHTQIIKTGFE-LNVYVCSVLIDMYAKHGRLGIAREILGRLT----EKDVVSWTAMIAGFAQHDLYVEALRLFEEMQNRGIRPDNIGFSSALSA 613          
BLAST of mRNA_H-paniculata_contig17938.4311.1 vs. uniprot
Match: A0A7S4BRQ8_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BRQ8_CHRCT)

HSP 1 Score: 61.2 bits (147), Expect = 3.750e-8
Identity = 31/83 (37.35%), Postives = 49/83 (59.04%), Query Frame = 0
Query:   56 RQALEGGVKGIDEQVCSILLDLCAVKGRMGLAEEISSLMDTHSIRKGPVTFCVMLKGYGRQQRLGRVLEVMQEMKTRGVVPDV 138
            R A E     +DE+V SI+L+ CA +GRM LA    + + +H +  G VT+C+++KGYGR   +  V  +   ++  GV PD+
Sbjct:  184 RAASEFEAPIVDERVTSIVLNSCAERGRMDLAMATVTALRSHDVAFGQVTYCILVKGYGRVGDVRSVDGIFSRLREAGVSPDM 266          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17938.4311.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LBV9_ECTSI5.690e-7182.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7F1_9PHAE2.650e-6881.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YV31_9STRA5.090e-2942.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CQL2_9STRA1.350e-1937.01Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0LHA5_9EUKA2.400e-1236.51Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A7S2SBE2_9STRA5.120e-1238.05Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A0M0K4N5_9EUKA2.750e-940.00Pentatricopeptide repeat-containing n=1 Tax=Chryso... [more]
A0A834Z287_9MAGN2.580e-826.90DYW_deaminase domain-containing protein n=1 Tax=Te... [more]
A0A7S4BRQ8_CHRCT3.750e-837.35Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 104..138
e-value: 1.1E-8
score: 32.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 34..62
e-value: 0.93
score: 9.9
coord: 104..134
e-value: 9.7E-5
score: 22.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 31..65
score: 7.87
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 102..136
score: 10.95
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 67..101
score: 6.719
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 2..150
e-value: 1.5E-22
score: 82.4
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 18..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17938contigH-paniculata_contig17938:697..4214 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17938.4311.1mRNA_H-paniculata_contig17938.4311.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17938 697..4214 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17938.4311.1 ID=prot_H-paniculata_contig17938.4311.1|Name=mRNA_H-paniculata_contig17938.4311.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=151bp
MIFSTQGSWTSGLEIFRLLLEDLRPRRLSPSQPTWKSLARGLRSTGQADQ
AVSVLRQALEGGVKGIDEQVCSILLDLCAVKGRMGLAEEISSLMDTHSIR
KGPVTFCVMLKGYGRQQRLGRVLEVMQEMKTRGVVPDVVALNAAVDAFVR
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf