mRNA_H-paniculata_contig17924.4307.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig17924.4307.1 vs. uniprot
Match: A0A6H5L3H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H7_9PHAE) HSP 1 Score: 125 bits (314), Expect = 2.730e-34 Identity = 60/72 (83.33%), Postives = 64/72 (88.89%), Query Frame = 1
Query: 1 MGQKHGKAVYDEAARPFLNLSFAAIGTLWETFNDVADGFGINLHEFREICSELGAELVLNRAQLDKVGASKA 216
MGQ+HGKAVYD AA+PFLNLS AA+GTLWETFNDVADGFGINLHEF EICSELG EL LNRA+LDKV S A
Sbjct: 1 MGQRHGKAVYDSAAKPFLNLSLAAVGTLWETFNDVADGFGINLHEFLEICSELGEELQLNRAKLDKVKLSTA 72
BLAST of mRNA_H-paniculata_contig17924.4307.1 vs. uniprot
Match: D7FR21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR21_ECTSI) HSP 1 Score: 123 bits (308), Expect = 5.190e-31 Identity = 57/70 (81.43%), Postives = 63/70 (90.00%), Query Frame = 1
Query: 1 MGQKHGKAVYDEAARPFLNLSFAAIGTLWETFNDVADGFGINLHEFREICSELGAELVLNRAQLDKVGAS 210
MGQ+HGKAVYD AA+PFLNLS AA+GTLWETFNDVADGFGINLHEF EICSELG EL LNRA+LDK+ +
Sbjct: 1 MGQRHGKAVYDSAAKPFLNLSLAAVGTLWETFNDVADGFGINLHEFLEICSELGEELQLNRAKLDKLSTA 70
BLAST of mRNA_H-paniculata_contig17924.4307.1 vs. uniprot
Match: K3XBQ5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBQ5_GLOUD) HSP 1 Score: 71.2 bits (173), Expect = 8.660e-15 Identity = 35/68 (51.47%), Postives = 47/68 (69.12%), Query Frame = 1
Query: 1 MGQKHGKAVYDEAARPFLNLSFAAIGTLWETFNDVADGFGINLHEFREICSELGAELVLN-RAQLDKV 201
MGQ HGKA Y +AA PF+N S + LWETFNDVA+GFG+N E EIC L L ++ +A++D++
Sbjct: 1 MGQLHGKATYLKAATPFVNASEKDVNKLWETFNDVAEGFGLNQDEMCEICRALQPTLEIHSKAEIDQL 68
BLAST of mRNA_H-paniculata_contig17924.4307.1 vs. uniprot
Match: A0A7S3ZW80_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZW80_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 3.010e-14 Identity = 38/66 (57.58%), Postives = 47/66 (71.21%), Query Frame = 1
Query: 1 MGQKHGKAVYDEAARPFLNLSFAAIGTLWETFNDVADGFGINLHEFREICSELGAELVLNRAQLDK 198
MGQ GKA +D AR F+NL AI LWE+FNDVADGFGI+L E + IC EL EL ++R+ L+K
Sbjct: 1 MGQMVGKAKWDPRARIFMNLPPGAINALWESFNDVADGFGISLCEMQLICQELTTELEISRSALNK 66
BLAST of mRNA_H-paniculata_contig17924.4307.1 vs. uniprot
Match: A0A7S3ZWB8_9STRA (Hypothetical protein n=6 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZWB8_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 3.040e-14 Identity = 38/66 (57.58%), Postives = 47/66 (71.21%), Query Frame = 1
Query: 1 MGQKHGKAVYDEAARPFLNLSFAAIGTLWETFNDVADGFGINLHEFREICSELGAELVLNRAQLDK 198
MGQ GKA +D AR F+NL AI LWE+FNDVADGFGI+L E + IC EL EL ++R+ L+K
Sbjct: 1 MGQMVGKAKWDPRARIFMNLPPGAINALWESFNDVADGFGISLCEMQLICQELTTELEISRSALNK 66
BLAST of mRNA_H-paniculata_contig17924.4307.1 vs. uniprot
Match: A0A5D6Y7G3_9STRA (EF-hand domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7G3_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 8.560e-14 Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = 1
Query: 1 MGQKHGKAVYDEAARPFLNLSFAAIGTLWETFNDVADGFGINLHEFREICSELGAELVLN-RAQLDKVGAS 210
MGQKHGKA AA PF+N S + LWETFNDVA+GFG++ E E+C L L ++ +A++D++ A+
Sbjct: 1 MGQKHGKAALVAAATPFVNASEKYVNKLWETFNDVAEGFGLSQDEASEVCRALQPALEIHAKAEMDQLTAA 71
BLAST of mRNA_H-paniculata_contig17924.4307.1 vs. uniprot
Match: A0A2D4CGP0_PYTIN (EF-hand domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGP0_PYTIN) HSP 1 Score: 72.4 bits (176), Expect = 3.660e-13 Identity = 37/74 (50.00%), Postives = 48/74 (64.86%), Query Frame = 1
Query: 1 MGQKHGKAVYDEAARPFLNLSFAAIGTLWETFNDVADGFGINLHEFREICSELGAELVLN-RAQLDKVGASKAT 219
MGQ HGKA Y +AA PFLN S + LWE+FNDVA+GFG+N E EIC L L ++ R +D++ A+ T
Sbjct: 1 MGQCHGKATYIKAAAPFLNASEKDVNRLWESFNDVAEGFGLNQDELSEICRTLMPTLEIHARVDMDQLSAALFT 74
BLAST of mRNA_H-paniculata_contig17924.4307.1 vs. uniprot
Match: A0A2D4BE44_PYTIN (EF-hand domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BE44_PYTIN) HSP 1 Score: 72.4 bits (176), Expect = 3.690e-13 Identity = 37/74 (50.00%), Postives = 48/74 (64.86%), Query Frame = 1
Query: 1 MGQKHGKAVYDEAARPFLNLSFAAIGTLWETFNDVADGFGINLHEFREICSELGAELVLN-RAQLDKVGASKAT 219
MGQ HGKA Y +AA PFLN S + LWE+FNDVA+GFG+N E EIC L L ++ R +D++ A+ T
Sbjct: 1 MGQCHGKATYIKAAAPFLNASEKDVNRLWESFNDVAEGFGLNQDELSEICRTLMPTLEIHARVDMDQLSAALFT 74
BLAST of mRNA_H-paniculata_contig17924.4307.1 vs. uniprot
Match: A0A7S3JT59_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JT59_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 4.500e-13 Identity = 34/67 (50.75%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 1 MGQKHGKAVYDEAARPFLNLSFAAIGTLWETFNDVADGFGINLHEFREICSELGAELVLNRAQLDKV 201
MGQK GK Y+ F+N+S I ++WE FNDVADGFGINL E + IC +L EL L+ L+K+
Sbjct: 14 MGQKVGKVAYEPNLESFINISTGGIESIWEAFNDVADGFGINLGETQLICGQLANELQLDVQALEKL 80
BLAST of mRNA_H-paniculata_contig17924.4307.1 vs. uniprot
Match: F0YHF1_AURAN (EF-hand domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHF1_AURAN) HSP 1 Score: 72.0 bits (175), Expect = 5.040e-13 Identity = 36/61 (59.02%), Postives = 43/61 (70.49%), Query Frame = 1
Query: 16 GKAVYDEAARPFLNLSFAAIGTLWETFNDVADGFGINLHEFREICSELGAELVLNRAQLDK 198
GKA Y AR F+NLS AI +WE+FNDVADGFGI+L E + IC EL +EL + R LDK
Sbjct: 3 GKARYHAKARAFVNLSAGAIEAVWESFNDVADGFGISLGEMQLICQELTSELEIGRPLLDK 63 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17924.4307.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig17924.4307.1 >prot_H-paniculata_contig17924.4307.1 ID=prot_H-paniculata_contig17924.4307.1|Name=mRNA_H-paniculata_contig17924.4307.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=73bp MGQKHGKAVYDEAARPFLNLSFAAIGTLWETFNDVADGFGINLHEFREICback to top mRNA from alignment at H-paniculata_contig17924:703..921- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig17924.4307.1 ID=mRNA_H-paniculata_contig17924.4307.1|Name=mRNA_H-paniculata_contig17924.4307.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=219bp|location=Sequence derived from alignment at H-paniculata_contig17924:703..921- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig17924:703..921- >mRNA_H-paniculata_contig17924.4307.1 ID=mRNA_H-paniculata_contig17924.4307.1|Name=mRNA_H-paniculata_contig17924.4307.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=438bp|location=Sequence derived from alignment at H-paniculata_contig17924:703..921- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |