prot_H-paniculata_contig1791.4302.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1791.4302.1
Unique Nameprot_H-paniculata_contig1791.4302.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length962
Homology
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BLAST of mRNA_H-paniculata_contig1791.4302.1 vs. uniprot
Match: D7G8I6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8I6_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 7.650e-9
Identity = 67/245 (27.35%), Postives = 108/245 (44.08%), Query Frame = 0 
Query:  166 AESGGISCACPGLIVWAPRGDVMWPAVLQEPVPSPAENRWKLRYLGPLSSKRNLSETDDGGVNAPVAQTRAPGLAFGETSASRMLLFPGRQRISVVARRDDSLRPTTGEVLAA------ETFS----DPNKNLQVAIDHAFHLCVKFNWDAVSGTVNVLTG----DLIV---GNKDERHEARKVRYSEMD----TPEALEHWLDRRGMKEARRRFVAVFNNRGEGADVACVELRSGSVELGQWMD 389
            A  G +    PGL+VWA RG  +WP+++++ V     ++W + +LGP+  +         G ++P      P  +  E  +S +L FPG   + ++A ++   RP       A      + FS       + LQ+AIDHA HLCV + W   +  VNVL G    DL +   G ++ R   RK+  +  D    TP+    W         R R +    +   G+   C  LR    E+  W++
Sbjct:  123 ARGGRVEKPTPGLVVWAKRGAELWPSLIRQKV---GYDKWTVVHLGPVVRQTR-------GSSSPTE----PAFSVKEVMSSSLLQFPGG--VPLMALKEKLKRPPESTEKKAKRAHVRDEFSLLANKERQVLQLAIDHAVHLCVVYAWGNDANMVNVLDGVPLDDLGLTAEGAQNGRKRLRKL-MARQDRWAMTPDTWRSW--------ERLRLIVNLGDTSVGS--LCQNLRYVYQEVENWIN 340
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1791.4302.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8I6_ECTSI7.650e-927.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1791contigH-paniculata_contig1791:400..7526 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1791.4302.1mRNA_H-paniculata_contig1791.4302.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1791 289..7699 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1791.4302.1 ID=prot_H-paniculata_contig1791.4302.1|Name=mRNA_H-paniculata_contig1791.4302.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=962bp
MTGVAIVATATTEPPLRPSSAASSGDELRQEQPKKKKREEAAIATTAAPA
TADGEISTPSDGPRDNLAQAVPTERRVSTSGRGTAAATVVKGSVDSTPPS
EARATAGKRPRSPTTAQALKRPRPSSPPPPPGALSLAAGDVLSSATGSVR
EAAAAVVAAAAVEVAAESGGISCACPGLIVWAPRGDVMWPAVLQEPVPSP
AENRWKLRYLGPLSSKRNLSETDDGGVNAPVAQTRAPGLAFGETSASRML
LFPGRQRISVVARRDDSLRPTTGEVLAAETFSDPNKNLQVAIDHAFHLCV
KFNWDAVSGTVNVLTGDLIVGNKDERHEARKVRYSEMDTPEALEHWLDRR
GMKEARRRFVAVFNNRGEGADVACVELRSGSVELGQWMDPLRRLRATPPQ
DRENDASSAVVTTEAKTLDERPTSADSVGTQGNSICSISGSGGEGAGSEK
SNQDKADMVAAPAPAKTDGGRGISSSASRSKGVASLDNRERRSDANLQAQ
PKEQLPHTNVLDADVGKDGECLPGVDSARDTAAGDGRVAGDGAGDTPIFP
GAKMTTNEIANLLLSRTRLDYETLFLEIIAKELEKDLEKSAQKEDASSVD
VSNSAGGGGGGEQSSRRTEEAGNLSLMKYADTVGEKLPERSKMPAEVSAK
ASGTPSTAKASNAETSSATVSSGRPAEIYSGVRKRSTATTTAQQFPAPNG
PRQQHLQQACSFPPMDGEDMGAGFDETFGVGERSSSSSSSSDEDSSLPLE
RNTSLTRNDKEKISSGVEKPSSSKKYASSAAAGAGDPAPPRSSSGGPLDR
QNKAGGGVSKKRRLVGLPETGEGEDVFSPAVLDGGGVSSQDIEPSAIKGG
ATSVAAAAGGVVGGSVHPPAKRLKVKRSSYDEERGDNAGGGGERSRGSSN
VGAMESMSGARQSGDGGGRYSESDSDGGQGEREDEDTIRTKRLLSKVGAG
LSGVPPRGICG*
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