mRNA_H-paniculata_contig17908.4301.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig17908.4301.1 vs. uniprot
Match: A0A6H5JEV1_9PHAE (Nocturnin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEV1_9PHAE) HSP 1 Score: 434 bits (1116), Expect = 1.800e-138 Identity = 243/469 (51.81%), Postives = 288/469 (61.41%), Query Frame = 1
Query: 802 LRDEVHAGVQALKWPSLLPRIWALSGEVDAIRA-AGAEVASGRNSGFAEDMLGGTKLKILQWNILCDGLSGSHPERGGFVKAPPDSLDWDKRRWKILEEILRWDCDVLALQEVDHHHDWLSPMLQKGGYRGLFVKKPCAPGLESNPTLEDGCSLFYRATPGAXXXXXXXXXXXXS------STTLELLDAHSFTFAVIEGEDMVDDGEEEIEAGDKAADV----------TDSRTP----VVQNQVAMLALLRVSA-GQGTEGADQNVDARQDSLVLLATTHLKALKNGHGEQARARQASQLLAEVDRFRVGHEAGRGLPPGSIPLVVAGDFNATPHMSKSGGGDGSGYEPLCFQRIMNHPLRLRSAFPL-EGMFTTWKVRPLAAAAAPPAADLAAATDTPAQQAKGSAAEGGRTKETKHCIDYVWVSEGVQTVRRSTFPRGEELGPLRAPSFVYPSDHFALAAELRLP 2139
L+ EV A V L WP L PR WA + A + AG + + G LKIL WN+LCDGLSG+HPERGGFV AP SLDW+KRRW++LEEILRWDCDVL LQEVDHHHDWLSPML K GYR LFVKKP APG+ NP LEDGCSLFYRAT +T L+LLDAHSF+ AV+E ED AGD + TD P VV NQVA+++LL VS+ G+G EG ++ ++LV++ TTHLKA K+GHGE R+RQA QLL EV RFR G E RGLP GS+P+++AGDFNATPH S GYEPLC+ +I +HPL LRSA PL + +FTTWKVR AA GG KE++HCIDYVW+SEG++ V ST P E LG RAPSF YPSDHFA+A +LRLP
Sbjct: 34 LQREVSAAVDGLNWPPLAPRGWAPLRALAAFPSPAGGDAGXXXXXXXXXER--GKTLKILTWNVLCDGLSGAHPERGGFVYAPEGSLDWEKRRWRLLEEILRWDCDVLVLQEVDHHHDWLSPMLAKQGYRSLFVKKPLAPGMAFNPHLEDGCSLFYRATAATTTAGDNAADSVPGKRGAEITTKLDLLDAHSFSLAVVETEDDT--------AGDNSGXXXXXXXXXXXRTDKADPPAEPVVGNQVALISLLGVSSPGRGGEGRGED-----EALVIVTTTHLKAKKDGHGELIRSRQAKQLLDEVARFRAGQEKARGLPAGSVPVIIAGDFNATPHAS-------GGYEPLCYGQITSHPLALRSALPLGDDLFTTWKVR---------------------------AAGGGGVKESRHCIDYVWLSEGLRPVEGSTLPSAEGLGLERAPSFAYPSDHFAIAVDLRLP 453
BLAST of mRNA_H-paniculata_contig17908.4301.1 vs. uniprot
Match: D7FH22_ECTSI (Nocturnin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH22_ECTSI) HSP 1 Score: 256 bits (655), Expect = 2.460e-73 Identity = 142/264 (53.79%), Postives = 163/264 (61.74%), Query Frame = 1
Query: 1075 RWKILEEILRWDCDVLALQEVDHHHDWLSPMLQKGGYRGLFVKKPCAPGLESNPTLEDGCSLFYRA----TPGAXXXXXXXXXXXXSSTT--LELLDAHSFTFAVIEGEDMVDDGEEEIEAGDKAADVTDSR----TPVVQNQVAMLALLRVSAGQGTEGADQNVDARQDSLVLLATTHLKALKNGHGEQARARQASQLLAEVDRFRVGHEAGRGLPPGSIPLVVAGDFNATPHMSKSGGGDGSGYEPLCFQRIMNHPLRLRSA 1836
RWK+LEEILRWDCDVL LQEVDHHHDWLSPML K GYR LFVKKP APG+ NP LEDGCSLFYRA T + TT L+LLDAHSF+ AV+E ED D + TD PVV NQVA+++LL VS+ G TTHLKA K+GHGE R+RQA QLL EV RFR G E RGLP GS+P+++AGDFNATPH S GYEPLC++++ HPL LRSA
Sbjct: 11 RWKLLEEILRWDCDVLVLQEVDHHHDWLSPMLAKQGYRSLFVKKPLAPGMAFNPHLEDGCSLFYRAAAATTTAGDDAADSVPGKRGAETTAKLDLLDAHSFSLAVVETED--DTAGDXXXXXXXXXXXTDKAGPPAEPVVGNQVALISLLGVSSPGGXXXXXXXXXXXXXXXXXXXTTHLKAKKDGHGELIRSRQAKQLLDEVARFRAGQEKARGLPAGSVPVIIAGDFNATPHAS-------GGYEPLCYRQVTAHPLALRSA 265
BLAST of mRNA_H-paniculata_contig17908.4301.1 vs. uniprot
Match: A0A835YLL9_9STRA (Nocturnin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLL9_9STRA) HSP 1 Score: 228 bits (581), Expect = 3.490e-63 Identity = 130/305 (42.62%), Postives = 174/305 (57.05%), Query Frame = 1
Query: 976 LQWNILCDGLSGSHPERGGFVKAPPDSLDWDKRRWKILEEILRWDCDVLALQEVDHHHDWLSPMLQKGGYRGLFVKKPCAPGLESNPTLEDGCSLFYRATPGAXXXXXXXXXXXXSSTTLELLDAHSFTFAVIEGEDMVDDGEEEIEAGDKAADVTDSRTPVVQNQVAMLALLRVSA-GQGTEGADQNVDARQDSLVLLATTHLKALKNGHGEQARARQASQLLAEVDRFRVGHEAGRGLPPG-SIPLVVAGDFNATPHMSKSGGGDGSGYEPLCFQRIMNHPLRLRSAFPLEG--MFTTWKVRP 1878
L+ +LCD LSG+ P+ GGFV++PP+SL W R+W+ILEEILR+D D++ L EVDH+ DW++PML GYRG FVKKP +P L+ LEDGC++ YRA +E+L++HS +A+ + T + NQVA++ALLR+ +G G D + +LATTHLKA K+ GE RA+QA QLLAEV +FR AG GL ++P++V GD NATPH S Y LC+ + LRLRSA+PL G FTTWK+RP
Sbjct: 24 LRAQVLCDALSGASPDLGGFVRSPPESLRWSSRKWRILEEILRFDADIITLCEVDHYDDWVAPMLATVGYRGCFVKKPASPTLQYGD-LEDGCAILYRAD------------------KVEVLNSHSLVYAIAD---------------------TPGAPRKICNQVAIMALLRLKTDAEGAAGGDGASGGYKH--FVLATTHLKADKSAEGEAVRAQQARQLLAEVGKFRDRAAAGLGLASAEALPVIVTGDMNATPHASAD-------YGALCYAELSTSALRLRSAYPLAGDDAFTTWKIRP 279
BLAST of mRNA_H-paniculata_contig17908.4301.1 vs. uniprot
Match: A0A0L0D9Q7_THETB (Nocturnin n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D9Q7_THETB) HSP 1 Score: 184 bits (466), Expect = 1.230e-47 Identity = 149/458 (32.53%), Postives = 198/458 (43.23%), Query Frame = 1
Query: 772 TKALGMARQSLRDEVHAGVQALKWPSLLPRIWALSGEVDAIRAAGAEVASGRNSGFAEDMLGGTKLKILQWNILCDGLSGSHPERGGFVKAPPDSLDWDKRRWKILEEILRWDCDVLALQEVDHHHDWLSPMLQKGGYRGLFVKKPCAPGLESNPTLEDGCSLFYRATPGAXXXXXXXXXXXXSSTTLELLDAHSFTFAVIEGEDMVDDGEEEIEAGDKAADVTDSRTPVVQNQVAMLALLRVSAGQGTEGADQNVDARQDSLVLLATTHLKALKNGHGEQARARQASQLLAEVDRFRVGHEAGRGLPPGSIPLVVAGDFNATPHMSKSGGGDGSGYEPLCFQRIMNHPLRLRSAF-----PLEGMFTTWKVRPLAAAAAPPAADLAAATDTPAQQAKGSAAEGGRTKETKHCIDYVWVSEGVQTVRRS-TFPRGEELGPLRAPSFVYPSDHFALAAE 2127
TK + R++L + A + P L R WA++G DA AE A+G ++I+Q+N+L DGLSG ERGGF AP SL ++ R+W++LEE+L D DVLA+QEVDH DW PML K GY G+F+KK +P L+ LEDG +LF R+ S L ++ SF A NQVA+LA + + LA THLKA K+ GE R QA LLA+ F +AG G PLVV D NA PH +K Y ++ +M L L SA+ E +TTWK+RP KE KH IDY++ TV + P + + +R PS+ YPSDHFALAA+
Sbjct: 4 TKDVHAQREALLAQAAAALDGR--PGLYKRGWAMAGVDDA-----AEEATG--------------VRIMQFNVLADGLSGLQEERGGFYAAPEGSLQFETRKWRLLEEVLLADPDVLAMQEVDHFADWFEPMLAKVGYEGVFLKKANSPCLQFCD-LEDGVALFVRS----------------SKLRLAAVEQISFPDA---------------------------------NQVALLARAELP--------------ESGRALTLAVTHLKATKSAEGENIREGQAVHLLAKAKAFM---QAGAG----DAPLVVCADLNAAPHDAK--------YPAKAWRAMMAADLELASAYGGRSADSEPAYTTWKLRP--------------------------------GKEAKHTIDYIFYQPAALTVSSTLAIPAEDVVVDVRLPSWEYPSDHFALAAD 329
BLAST of mRNA_H-paniculata_contig17908.4301.1 vs. uniprot
Match: A0A7S0HN10_9CRYP (Nocturnin n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HN10_9CRYP) HSP 1 Score: 182 bits (462), Expect = 8.920e-47 Identity = 133/399 (33.33%), Postives = 182/399 (45.61%), Query Frame = 1
Query: 958 GTKLKILQWNILCDGLSGSHPERGGFVKAPPDSLDWDKRRWKILEEILRWDC--DVLALQEVDHHHDWLSPMLQKGGYRGLFVKKPCAP-GLESNPTLEDGCSLFYRATPGAXXXXXXXXXXXXSSTTLELLDAHSFTFAVIEGEDMVDDGEEEIEAGDKAADVTDSRTPVVQNQVAMLALLRVSAGQGTEGADQNVDARQDSLVLLATTHLKALKNGHGEQARARQASQLLAEVDRFRVGHEAGRGLPPGSIPLVVAGDFNATPHMSKSGGGDGSGYEPLCFQRIMNHPLRLRSAFPL----EGMFTTWKVRPLAAAAAPPAADLAAATDTPAQQAKGSAAEGGRTKETKHCIDYVWVSEGVQTVRRSTFPRGEELGPLRAPSFVYPSDHFALAAELR 2133
G L + Q+N+L DGLSG ++GGF +A P L W+ RR K+++EI+R D++ALQEVDH HDW P+L GY G+FV KP +P + +P LEDGC+LF++ TL L + + F ++ E + PV NQVA+LA L EG S A THL A K+ GE+ R +Q +QLL DR + A ++A D NA P + + Y + +Q HPL+LRSA+ E FTTWK+R G E KH IDY++V+E ++ R P EE+ P R P + YPSDHFAL AE+R
Sbjct: 75 GKSLVVAQFNVLADGLSGMDVDKGGFSRASPMCLAWEHRRQKLVDEIMRHGIQPDIVALQEVDHFHDWFQPVLGGMGYDGIFVAKPNSPCKMSIDPRLEDGCALFWKRD------------------TLRLRGSETLNFEIMNNESV----------------------PVKTNQVAILAELE------QEGF---------SPFWFAVTHLHAKKSEEGERVRTQQVNQLL---DRLLSKNSA----------CILAMDMNAAPRSNGL-----ASYPAMAYQAAKQHPLKLRSAYEEVLGEEPAFTTWKLR-------------------------------GEV-EAKHTIDYIFVTEELEARRVLQLPVEEEIPPDRLPCWFYPSDHFALLAEIR 368
BLAST of mRNA_H-paniculata_contig17908.4301.1 vs. uniprot
Match: L1ISL3_GUITC (Nocturnin n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1ISL3_GUITC) HSP 1 Score: 173 bits (439), Expect = 2.750e-44 Identity = 129/402 (32.09%), Postives = 183/402 (45.52%), Query Frame = 1
Query: 955 GGTKLKILQWNILCDGLSGSHPERGGFVKAPPDSLDWDKRRWKILEEILRWDC--DVLALQEVDHHHDWLSPMLQKGGYRGLFVKKPCAPGLES-NPTLEDGCSLFYRATPGAXXXXXXXXXXXXSSTTLELLDAHSFTFAVIEGEDMVDDGEEEIEAGDKAADVTDSRTPVVQNQVAMLALLRVSAGQGTEGADQNVDARQDSLV--LLATTHLKALKNGHGEQARARQASQLLAEVDRFRVGHEAGRGLPPGSIPLVVAGDFNATPHMSKSGGGDGSGYEPLCFQRIMNHPLRLRSAFPL----EGMFTTWKVRPLAAAAAPPAADLAAATDTPAQQAKGSAAEGGRTKETKHCIDYVWVSEGVQTVRRSTFPRGEELGPLRAPSFVYPSDHFALAAELR 2133
GG L + Q+N+L DGLSG +GGF + P L W+ RR K+++EI+R D++ALQEVDH HDW P+L + GY G+F+ KP +P S +P+L+DGC+LF+R T++L ++ + V+ G D + P+ NQVA+LA + Q+ + A THL A K+ GE+ R +Q QLL + R P ++A D NA P KS G + Y L ++ HPL L SA+ E FTTWK+R G E KH IDY++++ ++ R P E+GP R PS+ YPSDHFAL AE+R
Sbjct: 22 GGKSLVVAQFNVLADGLSGMDVNKGGFCMSSPVCLAWEHRRQKLVDEIMRHGVQPDIVALQEVDHFHDWFEPVLGRMGYDGIFLPKPDSPCRRSMDPSLQDGCALFWRRE------------------TVKLKESEMVNYEVL-GHD---------------------KNPMKTNQVAILA-----------------EFEQEGVTPFWFAVTHLHAKKSEEGEKVRCQQIQQLLDRLLSKR-------------SPCLLAMDMNAAP---KSNGL--ASYPALAYEAARKHPLGLSSAYEEVMGEEPPFTTWKLR-------------------------------GEV-EAKHTIDYIFMTGELEATRVLELPDEGEVGPERLPSWSYPSDHFALLAEIR 316
BLAST of mRNA_H-paniculata_contig17908.4301.1 vs. uniprot
Match: A0A7S2AHC0_9DINO (Nocturnin (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2AHC0_9DINO) HSP 1 Score: 150 bits (380), Expect = 1.160e-36 Identity = 109/315 (34.60%), Postives = 156/315 (49.52%), Query Frame = 1
Query: 958 GTKLKILQWNILCDGLSGSHPERGGFVKAPPDSLDWDKRRWKILEEILRWDC--DVLALQEVDHHHDWLSPMLQKGGYRGLFVKKP---CAPGLESNPTLEDGCSLFYRATPGAXXXXXXXXXXXXSSTTLELLDAHSFTFAVIEGEDMVDDGEEEIEAGDKAADVTDSRTPVVQNQVAMLALLRVSAGQGTEGADQNVDARQDSLVLLATTHLKALKNGHGEQARARQASQLLAEVDRFRVGHEAGRGLPPGSIPLVVAGDFNATPHMSKSGGGDGSGYEPLCFQRIMNHPLRLRSAFP----LEGMFTTWKVR 1875
G +L++ Q+N+L DGLSG + GGF ++P +LD+ R+ +++EE+LR DV+A++EVDH+HDW P+L + GY G F+ KP C L+ P+L DGC+LF+R S +L L+ ++ A G++ + G K NQVA+LA LR G + V +A THL A K+ GEQ+R+RQ QLL DR + GRGLP +VA D NA P G + Y+ L + + H L LRSA+ E +TTWK R
Sbjct: 7 GARLRLAQFNVLADGLSGKDQKLGGFTESPVGALDFRYRKDRLIEELLRHGDPPDVIAMEEVDHYHDWFEPVLAELGYEGTFLSKPRSACRNSLD--PSLSDGCALFWRR----------------DSVSLVELETMNYDAA----------GKDGLPTGGK------------DNQVAILARLRPRGG---------------APVTVAVTHLVAKKSADGEQSRSRQILQLL---DRL-MERGQGRGLP-----CIVAADLNAAPTR-----GTTANYDALAYPAALQHELGLRSAYAEALGAEPAYTTWKKR 252
BLAST of mRNA_H-paniculata_contig17908.4301.1 vs. uniprot
Match: A0A3Q3VSV6_MOLML (Nocturnin n=1 Tax=Mola mola TaxID=94237 RepID=A0A3Q3VSV6_MOLML) HSP 1 Score: 149 bits (376), Expect = 4.040e-35 Identity = 116/398 (29.15%), Postives = 170/398 (42.71%), Query Frame = 1
Query: 967 LKILQWNILCDGLSGSHPERGGFVKAPPDSLDWDKRRWKILEEILRWDCDVLALQEVDHHHDWLSPMLQKGGYRGLFVKKPCAPGLESNPTL-EDGCSLFYRATPGAXXXXXXXXXXXXSSTTLELLDAHSFTFAVIEGEDMVDDGEEEIEAGDKAADVTDSRTPVVQNQVAMLALLRVS-AGQGTEGADQNVDARQDSLVLLATTHLKALKNGHGEQARARQASQLLAEVDRFRVGHEAGRGLPPGSIPLVVAGDFNATPHMSKSGGGDGSGYEPLCFQRIMNHPLRLRSAFPL-------EGMFTTWKVRPLAAAAAPPAADLAAATDTPAQQAKGSAAEGGRTKETKHCIDYVWVSEGVQTVR-RSTFPRGEELGPLRAPSFVYPSDHFALAAEL 2130
++I+QWNIL L + GF++ PPD+L+W +R++ ILEEIL + D+L LQEVDH++D P++ GY G F+ KP +P L+ DGC+LFYR S +L+ AH A++ + NQVA++ L GQ + +A THLKA ++G E+ R+ Q + LL + + R PGS+PL+V GDFNA P +QR + PL L SA+ L E +TTWK+R T E+ +DY+W S V P +++GP R PS+ YPSDH +L ++
Sbjct: 103 IRIMQWNILAQALGEG---KDGFIRCPPDALNWQERKYLILEEILTYRPDILCLQEVDHYYDTFQPIMASIGYHGSFLAKPSSPCLDVEQNNGPDGCALFYR----------------HSRFSLQAT-AHLRLSAMM----------------------------LPTNQVAIVQTLNCQLTGQ---------------QLCVAVTHLKA-RSGW-ERLRSAQGADLLQRLRSITTQGGSRREAAPGSVPLIVCGDFNAEPTED-------------VYQRFSSSPLGLNSAYKLLSSDGQTEPAYTTWKIR--------------------------------LTGESCSTLDYIWYSRDALIVECLLDIPTEDQIGPDRLPSYHYPSDHLSLLCDI 390
BLAST of mRNA_H-paniculata_contig17908.4301.1 vs. uniprot
Match: A0A671VZ03_SPAAU (Nocturnin n=1 Tax=Sparus aurata TaxID=8175 RepID=A0A671VZ03_SPAAU) HSP 1 Score: 144 bits (364), Expect = 2.870e-33 Identity = 118/402 (29.35%), Postives = 175/402 (43.53%), Query Frame = 1
Query: 967 LKILQWNILCDGLSGSHPERGGFVKAPPDSLDWDKRRWKILEEILRWDCDVLALQEVDHHHDWLSPMLQKGGYRGLFVKKPCAPGLESNPTL-EDGCSLFYRATPGAXXXXXXXXXXXXSSTTLELLDAHSFTFAVIEGEDMVDDGEEEIEAGDKAADVTDSRTPVVQNQVAMLALLRVSA-GQGTEGADQNVDARQDSLVLLATTHLKALKNGHGEQARARQASQLLAEVDRF---RVGHEAGRGLPPGSIPLVVAGDFNATPHMSKSGGGDGSGYEPLCFQRIMNHPLRLRSAFPL-------EGMFTTWKVRPLAAAAAPPAADLAAATDTPAQQAKGSAAEGGRTKETKHCIDYVWVSEGVQTVR-RSTFPRGEELGPLRAPSFVYPSDHFALAAELR 2133
++++QWNIL L + GFV+ P D+L W +R++ ILEEIL + D++ LQEVDH++D P++ GY+G F+ KP +P L+ DGC+LFYR S +L+ AH A++ + NQVA++ L A GQ + +A THLKA ++G E+ R+ Q + LL + R G + +P GSIPLVV GDFNA P ++R + PL L SA+ L E +TTWK+RP + E+ +DY+W S +V P E++GP R PS+ YPSDH +L +++
Sbjct: 135 IRVMQWNILAQALGEG---KDGFVRCPLDALKWQERKYLILEEILTYRPDIVCLQEVDHYYDTFQPIMASLGYQGSFMAKPWSPCLDVEQNNGPDGCALFYRR----------------SRFSLQAT-AHLRLSAMM----------------------------LPTNQVAIVQTLNCQATGQ---------------QLCVAVTHLKA-RSGW-ERLRSAQGADLLQSLRSITSGRGGTSQSQAMP-GSIPLVVCGDFNAEPSED-------------VYRRFSSSPLGLNSAYKLLSSDGETEPAYTTWKIRP--------------------------------SGESCSTLDYIWYSHDALSVECLLDIPTEEQIGPDRLPSYHYPSDHLSLLCDIK 425
BLAST of mRNA_H-paniculata_contig17908.4301.1 vs. uniprot
Match: A0A671VTT0_SPAAU (Nocturnin n=4 Tax=Sparidae TaxID=8169 RepID=A0A671VTT0_SPAAU) HSP 1 Score: 144 bits (364), Expect = 4.680e-33 Identity = 118/402 (29.35%), Postives = 175/402 (43.53%), Query Frame = 1
Query: 967 LKILQWNILCDGLSGSHPERGGFVKAPPDSLDWDKRRWKILEEILRWDCDVLALQEVDHHHDWLSPMLQKGGYRGLFVKKPCAPGLESNPTL-EDGCSLFYRATPGAXXXXXXXXXXXXSSTTLELLDAHSFTFAVIEGEDMVDDGEEEIEAGDKAADVTDSRTPVVQNQVAMLALLRVSA-GQGTEGADQNVDARQDSLVLLATTHLKALKNGHGEQARARQASQLLAEVDRF---RVGHEAGRGLPPGSIPLVVAGDFNATPHMSKSGGGDGSGYEPLCFQRIMNHPLRLRSAFPL-------EGMFTTWKVRPLAAAAAPPAADLAAATDTPAQQAKGSAAEGGRTKETKHCIDYVWVSEGVQTVR-RSTFPRGEELGPLRAPSFVYPSDHFALAAELR 2133
++++QWNIL L + GFV+ P D+L W +R++ ILEEIL + D++ LQEVDH++D P++ GY+G F+ KP +P L+ DGC+LFYR S +L+ AH A++ + NQVA++ L A GQ + +A THLKA ++G E+ R+ Q + LL + R G + +P GSIPLVV GDFNA P ++R + PL L SA+ L E +TTWK+RP + E+ +DY+W S +V P E++GP R PS+ YPSDH +L +++
Sbjct: 163 IRVMQWNILAQALGEG---KDGFVRCPLDALKWQERKYLILEEILTYRPDIVCLQEVDHYYDTFQPIMASLGYQGSFMAKPWSPCLDVEQNNGPDGCALFYRR----------------SRFSLQAT-AHLRLSAMM----------------------------LPTNQVAIVQTLNCQATGQ---------------QLCVAVTHLKA-RSGW-ERLRSAQGADLLQSLRSITSGRGGTSQSQAMP-GSIPLVVCGDFNAEPSED-------------VYRRFSSSPLGLNSAYKLLSSDGETEPAYTTWKIRP--------------------------------SGESCSTLDYIWYSHDALSVECLLDIPTEEQIGPDRLPSYHYPSDHLSLLCDIK 453 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17908.4301.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig17908.4301.1 >prot_H-paniculata_contig17908.4301.1 ID=prot_H-paniculata_contig17908.4301.1|Name=mRNA_H-paniculata_contig17908.4301.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=452bp MARQSLRDEVHAGVQALKWPSLLPRIWALSGEVDAIRAAGAEVASGRNSGback to top mRNA from alignment at H-paniculata_contig17908:736..5101- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig17908.4301.1 ID=mRNA_H-paniculata_contig17908.4301.1|Name=mRNA_H-paniculata_contig17908.4301.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4366bp|location=Sequence derived from alignment at H-paniculata_contig17908:736..5101- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig17908:736..5101- >mRNA_H-paniculata_contig17908.4301.1 ID=mRNA_H-paniculata_contig17908.4301.1|Name=mRNA_H-paniculata_contig17908.4301.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2712bp|location=Sequence derived from alignment at H-paniculata_contig17908:736..5101- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |