mRNA_H-paniculata_contig1789.4295.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1789.4295.1 vs. uniprot
Match: D8LRS7_ECTSI (Putative enoyl-CoA-hydratase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS7_ECTSI) HSP 1 Score: 337 bits (863), Expect = 7.330e-109 Identity = 182/370 (49.19%), Postives = 247/370 (66.76%), Query Frame = 3
Query: 156 DSPKGSRILTVKARNGLTTISRRELRSVNQHVRMWDENFMVQMSVVQGPGGDFCSGLNLQDIRG-RPLEVRYTLEALGRLVSSMRACRAPLLSVINGPSYGSAGHALASGRYRVCTEKSMFCIPEATLGLGLAGGLSYVLPRLDGGNPALGLCLGLTGMALQGADLLTAQLASQYFTYPHLAALVERVTDAQSMPRNPFEQVDQNEPTGAGRGAVLQMIEDACSLSFNVDGITANDFSMKGKDGKPIPHRTPLHGILPEVNRIFTVDSVEEAQHNLAGSKAPWAQLAIKNMGRSSPLSLKIIFEQIKRGGMKSMEECLDDEFAVNTSLFQMEDFESAMQAHDDPEIGTPIWTASSVEHVSNEEVTALFEP 1262
D G R L +K NG+ T R+ L V QH+ WDENFMV + + G GGDFCSGL+L D+RG +V+ +LEAL +V+++ + P+++V++G GS G+ALA GRY++ TE S F +PEATLGLGLAGGLSY LPRL GGN L LCL LTGMAL+G DL+ Q+A+ Y T+ L ++ER+ + P+ PF D+ AV ++E + LS+NVDG+ + + IP +H +LP+V R+F V+SVEEA NL G PWA++A++N+ RSSPL LK+IFEQ+KRGG K ++ECLDDEF+VNT LF + DFE+AMQA + GTPIW S+E VS ++VTA+FEP
Sbjct: 40 DMNGGFRALQLKKVNGVPTFDRQSLIEVRQHLEWWDENFMVNVVALNGDGGDFCSGLDLADLRGGHQQKVKTSLEALCNVVTALDTSKTPVVAVLDGSCIGS-GYALAMGRYKLATENSTFHVPEATLGLGLAGGLSYTLPRLLGGNQPLALCLALTGMALEGPDLVLTQIATGYMTHRRLDMMMERLAEINQDPK-PFG--DKTPDCSEDPTAVQTLLERSVDLSWNVDGLPDD---LLDPPESQIPITPFIHDLLPQVERVFAVESVEEAIDNLKGLSDPWAKVALQNIERSSPLCLKVIFEQVKRGGNKDLQECLDDEFSVNTHLFGLHDFEAAMQARESGG-GTPIWKCGSMEQVSQDQVTAVFEP 401
BLAST of mRNA_H-paniculata_contig1789.4295.1 vs. uniprot
Match: A0A7R9QV63_9ACAR (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial n=1 Tax=Oppiella nova TaxID=334625 RepID=A0A7R9QV63_9ACAR) HSP 1 Score: 132 bits (332), Expect = 4.670e-31 Identity = 102/394 (25.89%), Postives = 183/394 (46.45%), Query Frame = 3
Query: 126 RERDKHVVDCDSPKGSRILTVKARNGLTTISRRELRSVNQHVRMWDENFMVQMSVVQGPGGD-FCSGLNLQDI----RGRPLEVRYTLEA--LGRLVSSMRACRAPLLSVINGPSYGSAGHALASGRYRVCTEKSMFCIPEATLGLGLAGGLSYVLPRLDGGNPALGLCLGLTGMALQGADLLTAQLASQYFTYPHLAALVERVTDAQSMPRNP-FEQVDQNEPTGAGRGAVLQMIEDACSLSFNVDGITANDFSMKGKDGKPIPHRTPLHGILPEVNRIFTVDSVEEAQHNLAGSKAPWAQLAIKNMGRSSPLSLKIIFEQIKRGGMKSMEECLDDEFAVNTSLFQMEDFESAMQAH-DDPEIGTPIWTASSVEHVSNEEVTALFEPTTYPRQ 1280
R +K ++ + PK LTV+ ++ + ++ W+ + ++M +++ G FC+G +++ I +G P+ + E + L+ S+ P +S+ING G G +RV TEK++F +PE +G G S+ LPRL G LGL LGLTG L G D++ A + + + HL L + + + NP +D+ +L ++ F +FS+K + G+ +N F SVEE NL + W++ ++ + R P+SLK+ FE++KRG ++ ECL EF ++ + +DF + + + D P+W ++E +S+ EV + F+P + P +
Sbjct: 13 RTVNKGIITLNRPKALHSLTVEM-----------VKKIYPQLKSWETDNTMKMVMIKATGDKAFCAGGDVKSIALSGKGAPITDEFFREEYRMNNLIGSLSI---PYVSLINGIVMGGGVGISVHGPFRVVTEKAVFAMPETAIGFFPDVGASHFLPRLPG---KLGLFLGLTGHRLSGRDIVKAGVGTHFVPSAHLKDLEQEIMRLE----NPDLHSIDK----------ILTKYQEQWEQDFK------KEFSLKPQIGR--------------INSAFGGQSVEEIVANLKKDGSEWSKAQLEVLSRMCPMSLKLTFEELKRGHSSTLPECLKMEFRLSQHCMKADDFFTGVTSVLVDKSKAPPVWKHRTLEEISDAEVQSYFQPLSAPHK 355
BLAST of mRNA_H-paniculata_contig1789.4295.1 vs. uniprot
Match: A0A087UG96_STEMI (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial (Fragment) n=2 Tax=Stegodyphus TaxID=175340 RepID=A0A087UG96_STEMI) HSP 1 Score: 132 bits (332), Expect = 7.280e-31 Identity = 92/374 (24.60%), Postives = 173/374 (46.26%), Query Frame = 3
Query: 177 ILTVKARNGLTTISRRELRSVNQHVRMWDENFMVQMSVVQGPGGD-FCSGLNLQDI-----RGRPLEVRYTLEALGRLVSSMRACRAPLLSVINGPSYGSAGHALASGRYRVCTEKSMFCIPEATLGLGLAGGLSYVLPRLDGGNPALGLCLGLTGMALQGADLLTAQLASQYFTYPHLAALVERVTDAQSMPRNPFEQVDQNEPTGAGRGAVLQMIEDACSLSFNVDGITANDFSMKGKDGKPIPHRTPLHGILPEVNRIFTVDSVEEAQHNLAGSKAPWAQLAIKNMGRSSPLSLKIIFEQIKRGGMKSMEECLDDEFAVNTSLFQMEDFESAMQAHDDPEIGTPIWTASSVEHVSNEEVTALFEPTTYPRQ 1280
++T+ L +++ +R++ ++ WD + ++M +V+G G FC+G +++ + G +L + + + P +++I+G + G G YRVCTE+++ +PEA +G G SY LPRL G +GL L LTG LQG D+ A +A+ + D S+ + + PT + +L + C + + +F++K GK +N +F D+VE L + W++ + M + SP SLK+ F+Q+KRG ++++CL E+ + Q DF ++A + +P W +++E V+ ++V + FEP ++
Sbjct: 43 VITLNRPKALNSLNLSMIRTIYPQLKAWDSDPEIKMVIVKGSGDRAFCAGGDVRALVEAHKAGNTSLAEDFFREEYQLNNLIGTLQIPYVAIIDGITMGGGIGISVHGAYRVCTERTVCAMPEAAIGFFPDVGGSYFLPRLPG---KIGLFLALTGYRLQGRDVFKAGIATHF-------------VDTTSLKDLERDLLRLENPTLSDIDRILLKFQQQCEIDYK------KEFALKPVMGK--------------MNTVFEADNVESVMEALKKEGSEWSRKQHETMSKLSPTSLKVAFQQLKRGANLTLQDCLKMEYRLCQRFMQNNDFHEGVRAVLIDKDSSPKWNPATLEEVTEKKVNSYFEPLASDKE 380
BLAST of mRNA_H-paniculata_contig1789.4295.1 vs. uniprot
Match: A0A6F9DF88_9ASCI (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DF88_9ASCI) HSP 1 Score: 132 bits (331), Expect = 1.460e-30 Identity = 101/398 (25.38%), Postives = 178/398 (44.72%), Query Frame = 3
Query: 99 KTTRMPVHYRERDKHVVD---CDSPKGSRILTVKARNGLTTISRRELRSVNQHVRMWDENFMVQMSVVQGPGGD-FCSGLNLQDIRGRPLEVRYTLEALGR--------LVSSMRACRAPLLSVINGPSYGSAGHALASGRYRVCTEKSMFCIPEATLGLGLAGGLSYVLPRLDGGNPALGLCLGLTGMALQGADLLTAQLASQYFTYPHLAALVERVTDAQSMPRNPFEQVDQNEPTGAGRGAVLQMIEDACSLSFNVDGITANDFSMKGKDGKPIPHRTPLHGILPEVNRIFTVDSVEEAQHNLAGSKAPWAQLAIKNMGRSSPLSLKIIFEQIKRGGMKSMEECLDDEFAVNTSLFQMEDFESAMQAHDDPEIGTPIWTASSVEHVSNEEVTALF 1256
K R+P K+V D D G+ I+T+ + L ++ ++ + ++ W+++ M +++G G FC+G DIR E R A G+ L + C P +++I+G + G G +R+CTE+++F +PE +GL G S+ LPRL + LGL L LTG L+G D+ A +A+ R+ D+ +P+ E V PT +L+ + C D + D ++ RIF D+VEE NL + WA+ + + + SP SLK+ +QI+ G ++ECL+ E+ + + + DF+ ++A + P W +++ V++E + + F
Sbjct: 35 KLYRIPCFRSMSSKYVEDDVLFDKVGGAGIITLNRPSALNALNLSMIQKILPKIKEWEDDPRTTMIIMKGSGDKAFCAG---GDIRSITDEARMGNYAPGQEFFHSEYHLNYRIATCLVPYIAIIDGITMGGGVGLSVHGEHRICTERTLFAMPETGIGLFPDVGGSHFLPRL---SQHLGLYLALTGYKLKGRDVYKAGVAT-------------RMVDSTMLPKLEKELVSMETPTQQDIIDILRKYHEECQTGRERDYLILRDRE-------------------DDIKRIFCADTVEEIFQNLEADGSEWAKQQLDTLKKMSPTSLKVTHQQIQMGASLELDECLEMEYRIGCNCLRNNDFQEGVRALLVDKDKNPKWNPNTLSGVTDEILNSYF 394
BLAST of mRNA_H-paniculata_contig1789.4295.1 vs. uniprot
Match: A0A7R9AEC1_9CRUS (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R9AEC1_9CRUS) HSP 1 Score: 126 bits (316), Expect = 1.290e-28 Identity = 108/393 (27.48%), Postives = 179/393 (45.55%), Query Frame = 3
Query: 108 RMPVHYRERDKHVVDCDSPKGSRILTVKARNGLTTISRRELRSVNQHVRMWDENFMVQMSVVQGPGG-DFCSGLNLQDI-----RGRPLEVRYTLEA--LGRLVSSMRACRAPLLSVINGPSYGSAGHALASGRYRVCTEKSMFCIPEATLGLGLAGGLSYVLPRLDGGNPALGLCLGLTGMALQGADLLTAQLASQYFTYPHLAALVERVTDAQSMPRNPFEQVDQNEPTGAGRGAVLQMIEDACSLSFNVDGITANDFSMKGKDGKPIPHRTPLHGILPEVNRIFTVDSVEEAQHNLAGSKAPWAQLAIKNMGRSSPLSLKIIFEQIKRGGMKSMEECLDDEFAVNTSLFQMEDFESAMQAHDDPEIGTPIWTASSVEHVSNEEVTALFEP 1262
+MP ++ ++D + KG ++ + L ++ +R V ++ W + + +++G GG FC+G +++ I RG L + E L L +++ P +++I+G + G G +RV TE ++F +PE +GL G S+ LPRL G LGL L LTG L G D+++A +A+ + L+E + D P EQV AVL+ DA ++ GKD R L L +++ IF+ DSVEE L + WA+ + + SP SLK+ FEQ+KRG S+++C E+ ++ DF ++A + P W +E V+ E+V F P
Sbjct: 27 QMPFSSLAEEEVMLDITNQKG--VILLNRTKALNALNLSMIRKVYPKLKRWQSE--LDLVIIRGAGGKSFCAGGDVRAIVEAGKRGDRLTKDFFREEYMLNYLTGTLKI---PYIAIIDGITMGGGFGLSVHGPFRVATENTVFAMPETAIGLFPDVGGSHFLPRLKG---KLGLFLALTGQRLTGRDVMSAGIATHMCDAKRVPDLIEDLFDC---PSGKEEQVK----------AVLKKHSDASTV---------------GKD-----RRYSLEEHLSQIDAIFSADSVEEIVQRLEKDGSNWAKDQKHTLMKMSPTSLKVTFEQLKRGAQLSLKDCFCMEYRLSQRFCTDHDFYEGVRAVLVDKDNNPRWKPDRLEEVTAEKVAHYFNP 376
BLAST of mRNA_H-paniculata_contig1789.4295.1 vs. uniprot
Match: A0A0C9SE68_AMBAM (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial (Fragment) n=8 Tax=Ixodidae TaxID=6939 RepID=A0A0C9SE68_AMBAM) HSP 1 Score: 125 bits (314), Expect = 2.770e-28 Identity = 95/372 (25.54%), Postives = 176/372 (47.31%), Query Frame = 3
Query: 177 ILTVKARNGLTTISRRELRSVNQHVRMWDENFMVQMSVVQGPGGD--FCSGLNLQDI---RGRPLEVRYTLEA----LGRLVSSMRACRAPLLSVINGPSYGSAGHALASGRYRVCTEKSMFCIPEATLGLGLAGGLSYVLPRLDGGNPALGLCLGLTGMALQGADLLTAQLASQYFTYPHLAALVERVT-DAQSMPRNPFEQVDQNEPTGAGRGAVLQMIEDACSLSFNVDGITANDFSMKGKDGKPIPHRTPLHGILPEVNRIFTVDSVEEAQHNLAGSKAPWAQLAIKNMGRSSPLSLKIIFEQIKRGGMKSMEECLDDEFAVNTSLFQMEDFESAMQAHDDPEIGTPIWTASSVEHVSNEEVTALFEP 1262
++T+ L +S +R + ++ WD + ++M +++ G FC+G +++ I +G+ ++R L L++S+ P +++++G + G G +RV TE+++F +PE +G G SYVLPRL G LG+ LGLTG L G D+L ++A+ + + ++ +E + D + +D+ +L +D C F +F +K G+ +N F SVE NL + WA+ + + + SPLSLKI F ++ G ++++ L EF ++ Q DF +++ G+P+W +++E V++E V+A FEP
Sbjct: 54 VITLNRPKALNALSLEMIRQIYPVLKKWDTDPEMKMVIIKAAPGSKAFCAGGDVKAIALTQGQDSKLRDAFFREEFRLNNLIASLTV---PYVALLDGVTMGGGVGLSVHGTFRVATERTVFAMPETAIGFFPDVGGSYVLPRLPG---RLGIYLGLTGQRLIGWDVLKGRIATHFSS----SSRIEHIEGDLMRLTTPSISDIDK----------ILVKHQDQCEADFR------KEFVLKKYMGR--------------INAAFDAPSVERIIENLKKDNSDWAKEQLTILSQMSPLSLKITFRLLEEGIRLTLQDALKMEFRLSQRFMQDSDFYEGVRSVLIDRTGSPMWNPATLEEVTDERVSAYFEP 385
BLAST of mRNA_H-paniculata_contig1789.4295.1 vs. uniprot
Match: UPI001F8AD588 (Uncharacterized protein n=2 Tax=Dermatophagoides farinae TaxID=6954 RepID=UPI001F8AD588) HSP 1 Score: 123 bits (309), Expect = 1.400e-27 Identity = 94/366 (25.68%), Postives = 170/366 (46.45%), Query Frame = 3
Query: 177 ILTVKARNGLTTISRRELRSVNQHVRMWDENFMVQMSVVQGPGGD-FCSGLNLQDIR--GRPLEV-RYTLEALGRLVSSMRACRAPLLSVINGPSYGSAGHALASGRYRVCTEKSMFCIPEATLGLGLAGGLSYVLPRLDGGNPALGLCLGLTGMALQGADLLTAQLASQYFTYPHLAALVERVTDAQSMPRNPFEQVDQNEPTGAGRGAVLQMIEDACSLSFNVDGITANDFSMKGKDGKPIPHRTPLHGILPEVNRIFTVDSVEEAQHNLAGSKAPWAQLAIKNMGRSSPLSLKIIFEQIKRGGMKSMEECLDDEFAVNTSLFQMEDFESAMQAHDDPEIGTPIWTASSVEHVSNEEVTALFEP 1262
++T+ L ++S +R + + WD + ++M +++ FC+G ++++I G E+ R L + P +++ING G G +RV TE ++ +PE +G G SY LP+L G LG+ LGLTG L+G D+ A LA+ + H++AL N +++ A +L ++ + +FS+K G+ +N F DSVE+ NL + WA+ ++++ ++SP SLK+ FEQ+KRG S+ +CL E+ ++ ++ Q +DF ++A + P W ++ V+N+ V ++F P
Sbjct: 57 LITLNRPKALNSLSLNMVRLIYPQLVKWDADPNIRMIIIKSNMEKAFCAGGDVREIAESGPNSELSRNFFREEYILNHKISVLGVPYIALINGICMGGGVGVSVHGPFRVSTENTIIAMPETQIGFFCDVGGSYFLPKLPG---KLGVYLGLTGRRLKGLDIQKAGLATHFVPSSHISAL-----------ENDLYRIEN--ANAAKISHLLSKYQEQWKDEYK------QEFSLKPYIGR--------------INSAFDADSVEQIVQNLEKDGSEWAKEVLEDLSKASPTSLKVTFEQLKRGKSLSLPDCLTMEYRLSQNILQHKDFYIGIRARLIEKTNNPQWDPKTLAEVTNQTVQSMFGP 386
BLAST of mRNA_H-paniculata_contig1789.4295.1 vs. uniprot
Match: UPI001C72784C (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI001C72784C) HSP 1 Score: 121 bits (303), Expect = 7.510e-27 Identity = 92/368 (25.00%), Postives = 162/368 (44.02%), Query Frame = 3
Query: 177 ILTVKARNGLTTISRRELRSVNQHVRMWDENFMVQMSVVQGPGGD-FCSGLNLQDIR-----GRPLEVRYTLEALGRLVSSMRACRAPLLSVINGPSYGSAGHALASGRYRVCTEKSMFCIPEATLGLGLAGGLSYVLPRLDGGNPALGLCLGLTGMALQGADLLTAQLASQYFTYPHLAALVERVTDAQSMPRNPFEQVDQNEPTGAGRGAVLQMIEDACSLSFNVDGITANDFSMKGKDGKPIPHRTPLHGILPEVNRIFTVDSVEEAQHNLAGSKAPWAQLAIKNMGRSSPLSLKIIFEQIKRGGMKSMEECLDDEFAVNTSLFQMEDFESAMQAHDDPEIGTPIWTASSVEHVSNEEVTALFEP 1262
++T+ L +++ +R + ++ WD N +++ +V+ FC+G +++ + G P +L + + + P +++I+G + G G +RVCTE+++ +PEA +G G SY LPRL G +GL L LTG LQG D+ A +A+ + D + E + PT + +L C + +F++K GK +N +F DSVE NL + W++ + + + SP SLK+ FEQ+KRG +++ L E+ + DF ++A P W +++E VS E+V + FEP
Sbjct: 42 VITLNRPKALNSLNLNMIRKIYPQLKAWDTNPDIKLVIVKSSSERAFCAGGDVRALAEAHKAGNPTMAEEFFREEYQLNNLIGTLQIPYVALIDGITMGGGIGISVHGAFRVCTERTVCAMPEAAIGFFPDVGGSYFLPRLPG---KIGLFLALTGYRLQGRDVFKAGIATHF-------------VDTGGLKHLETELMRLENPTLSDVDRILLKFHQQCEADYK------KEFALKPVMGK--------------MNTVFEADSVETIMENLKKEGSEWSRKNYEAVKKLSPTSLKVSFEQLKRGADMTLQNGLVMEYRLCQRFMADHDFHDGVRAVLIDRDNKPTWKPATLEEVSAEKVNSYFEP 373
BLAST of mRNA_H-paniculata_contig1789.4295.1 vs. uniprot
Match: A0A7R9KKY9_9ACAR (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial n=1 Tax=Medioppia subpectinata TaxID=1979941 RepID=A0A7R9KKY9_9ACAR) HSP 1 Score: 121 bits (304), Expect = 8.000e-27 Identity = 97/376 (25.80%), Postives = 171/376 (45.48%), Query Frame = 3
Query: 177 ILTVKARNGLTTISRRELRSVNQHVRMWDENFMVQMSVVQGPGGD-FCSGLNLQDI----RGRPLEVRYTLEALGRLVSSMRACRAPLLSVINGPSYGSAGHALASGRYRVCTEKSMFCIPEATLGLGLAGGLSYVLPRLDGGNPALGLCLGLTGMALQGADLLTAQLASQYFTYPHLAALVERVTDAQSMPRNPFEQVDQNEPTGAGRGAVLQMIEDACSLSFNVDGITANDFSMKGKDGKPIPHRTPLHGILPEVNRIFTVDSVEEAQHNLAGSKAPWAQLAIKNMGRSSPLSLKIIFEQIKRGGMKSMEECLDDEFAVNTSLFQMEDFESAM-----QAHDDPEIGTPIWTASSVEHVSNEEVTALFEPTTYP 1274
I+T+ L ++S ++ + ++ W+ + ++M +++ G FC+G +++ I +G + + E R+ + + + P +S+ING G G +RV TEK++F +PE +G G S+ LPRL G LGL LGLTG L G D++ A + + + L L + D + +D+ +L + F +FS+K G+ +N F SVEE NL + W++ + M R SP+SLK+ +E+++RG ++ ECL EF ++ EDF + + +P P+W ++E +S +EV + F+P T P
Sbjct: 68 IITLNRPKALHSLSLSMVKKIYPQLKSWEMDNTMKMVLIKATGDKAFCAGGDVKTIAQSGKGSAITDEFFREEY-RMNNIIGSLAIPYVSLINGIVMGGGVGISVHGPFRVVTEKAVFAMPETAIGFFPDVGASHFLPRLPG---KLGLFLGLTGHRLTGRDIVKAGVGTHFVPSDRLNELEK---DLIRLEAPDIHSIDK----------ILTKYSEQWEQDFK------KEFSLKQYIGR--------------INSAFGGQSVEEIVENLKKDNSEWSKQQLDIMSRMSPMSLKLTYEELRRGHNLTLPECLKMEFRISQHCMANEDFFTGVTHLLVNKSKEP----PVWKHRTLEEISAQEVDSYFQPLTAP 402
BLAST of mRNA_H-paniculata_contig1789.4295.1 vs. uniprot
Match: A0A0N4ZA03_PARTI (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial n=1 Tax=Parastrongyloides trichosuri TaxID=131310 RepID=A0A0N4ZA03_PARTI) HSP 1 Score: 120 bits (300), Expect = 1.710e-26 Identity = 91/374 (24.33%), Postives = 167/374 (44.65%), Query Frame = 3
Query: 156 DSPKGSRILTVKARNGLTTISRRELRSVNQHVRMWDENFMVQMSVVQGPGGD-FCSGLNLQDIR-----GRPLEVRYTLEALGRLVSSMRACRAPLLSVINGPSYGSAGHALASGRYRVCTEKSMFCIPEATLGLGLAGGLSYVLPRLDGGNPALGLCLGLTGMALQGADLLTAQLASQYFTYPHLAALVERVTDAQSMPRNPFEQVDQNEPTGAGRGAVLQMIEDACSLSFNVDGITANDFSMKGKDGKPIPHRTPLHGILPEVNRIFTVDSVEEAQHNLAGSKAPWAQLAIKNMGRSSPLSLKIIFEQIKRGGMKSMEECLDDEFAVNTSLFQMEDFESAMQAHDDPEIGTPIWTASSVEHVSNEEVTALFE 1259
+S +++T+ L ++ +R + +++W+ M +++G G FC+G ++ + G + + E +L + + C+ P +++I+G + G +G++RV TE+++ +PE LGL G SY L RL LG+ L LTG L+G D+L + +A+ Y L E V++ +L + ++ C + VD I + D K L+ ++ ++N +F+ ++ E NL + WA+ +K + SP SLK+ FEQ+KRG S E E+ + + DF +A + P W + + HVS+E + FE
Sbjct: 25 ESVGNKKVITLNRPKALNALNLEMVRDIYPEMKVWNTTSPASMIIIKGAGDKAFCAGGDVVSVTNSAKTGGDVHKLFFKEEY-QLNNLIAKCKMPYIALIDGITMGGGCGLSINGKFRVATERTLLAMPETALGLFPDVGGSYFLSRLSNN---LGMYLALTGYRLKGLDVLFSGMATHYVQSKDL------------------EFVEKE---------LLNLSDNKCK-NEEVDKILREFMPKEASDKKNFS----LNNVIDKINSLFSAETYEGILKNLEKDNSDWAKSQLKTLSTMSPTSLKVTFEQLKRGAKMSHSEVFPMEYRLTQRFMEDFDFHEGCRAILIDKDRNPKWRPNDITHVSDETIKKYFE 362 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1789.4295.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1789.4295.1 >prot_H-paniculata_contig1789.4295.1 ID=prot_H-paniculata_contig1789.4295.1|Name=mRNA_H-paniculata_contig1789.4295.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=428bp MTSRGLLVRRSCLTLVKRWSSNFPNDAPKPWPKTTRMPVHYRERDKHVVDback to top mRNA from alignment at H-paniculata_contig1789:19886..23551- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1789.4295.1 ID=mRNA_H-paniculata_contig1789.4295.1|Name=mRNA_H-paniculata_contig1789.4295.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3666bp|location=Sequence derived from alignment at H-paniculata_contig1789:19886..23551- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1789:19886..23551- >mRNA_H-paniculata_contig1789.4295.1 ID=mRNA_H-paniculata_contig1789.4295.1|Name=mRNA_H-paniculata_contig1789.4295.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2568bp|location=Sequence derived from alignment at H-paniculata_contig1789:19886..23551- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |