mRNA_H-paniculata_contig1789.4294.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig1789.4294.1
Unique Name	mRNA_H-paniculata_contig1789.4294.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig1789.4294.1 vs. uniprot
Match: D8LRS8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS8_ECTSI)

HSP 1 Score: 564 bits (1454), Expect = 3.620e-194
Identity = 313/464 (67.46%), Postives = 360/464 (77.59%), Query Frame = 1

Query:   85 MGHLRLKLLAMAVASVLVLDCAIAASKGASRSGGHRRTSTPTSSHSRRSHKEREEDWESPECEVSAGTVGKVTRRPTRGKNDKKVQREGSTSRRKHAYPSSS-SASRSGPRKVEASESGSRERRRNRAHGMELVPSRRGQPKPSMLAGIAATVKGRAAAMQEDAKGKMTEWRNIAKTTVWFSSKMEKFMIQMTWPDDGVLDDIWVKDTMNFLESAGNEPPRSPNNPNKRILRKLWLRMTEQDYRTKLKALQILHHTSIDLSPEALTRVRNQFLKMRDETNHKNRNEVYFEPSRIMDVSSSGMPFLPLLRSYSSFAFRRVTEVQGGPQQLASSLRSKKTSQADAVSLLRRLDKLICTGTRCKVDRKTLNTITGQVVNLAARDMMSLWRLYVKGLKRMMKGGYKDGKMATPEEVSQLLKQYSKTQDMVQAYLVYHKKIVRDRAMFDDNQIDSTALEDFLSIVATED 1473
            MGH RL LL +AV  +  +D A AASKGA R+G  +R ST  S  SR S ++ +ED    E +   G   K TR           + +GS  RR    PSS+  +SRS  R  E+  S      R R+ GMELVPSRR  PK SML+G+AAT+KG+AA+MQEDAKGK+TEWRNIAKTTVWFSSKMEKFMIQMTWPDDG LDD WVKDTMNFLESAGNEPPRSPNNPNKRILRKLWLRMTE DYRTKLKALQILHHT++DLS EA  RVRNQF+KMRDETNHKNRNEVYFEP+RIMDV+SSGMPFLPLLRSYSSF  RR+TEVQGGP+Q+AS+LRSKKTSQ +AV+LLRRLDKLICTG  CKVDRKTLNTITGQV+ L ARD+M+LWRLYVKGL R++KGGYK+G+   PE V QLL QY KTQ  ++ YL + KKIVRDR +F+DNQ+D  AL+  L+ V   D
Sbjct:    1 MGHRRLALLGLAVVVLFAVDGAAAASKGAPRAGSQQRRSTKASRSSRPSRRDIDEDER--EFQGWDGETKKGTRXXXXXXXXXAARDDGSVGRR--VRPSSTPGSSRSSSRYQESGTS------RRRSRGMELVPSRRSPPKSSMLSGLAATMKGKAASMQEDAKGKVTEWRNIAKTTVWFSSKMEKFMIQMTWPDDGALDDAWVKDTMNFLESAGNEPPRSPNNPNKRILRKLWLRMTEGDYRTKLKALQILHHTTMDLSSEANGRVRNQFMKMRDETNHKNRNEVYFEPARIMDVTSSGMPFLPLLRSYSSFTLRRMTEVQGGPKQIASTLRSKKTSQPEAVALLRRLDKLICTGMGCKVDRKTLNTITGQVMQLTARDLMTLWRLYVKGLTRLIKGGYKEGRTPAPEAVVQLLTQYGKTQQALERYLTHFKKIVRDRRLFEDNQVDPAALQVCLASVTQAD 454

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BLAST of mRNA_H-paniculata_contig1789.4294.1 vs. uniprot
Match: A0A835YKQ2_9STRA (ANTH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKQ2_9STRA)

HSP 1 Score: 228 bits (580), Expect = 1.310e-62
Identity = 143/384 (37.24%), Postives = 215/384 (55.99%), Query Frame = 1

Query:  478 LVPSRRGQ-----PKPSMLAGIAATVKGRAAAMQEDAKGKMTEWRNIAKTTVWFSSKMEKFMIQMTWPDDGVLDDIWVKDTMNFLESAGNEPPR-SPNNPNKRILRKLWLRMTEQDYRTKL----------------KALQILHHTSIDLSPEALTRVRNQFLKMRDETNHKNRNEVYFEPSRIMDVSSSGMPFLPLLRSYSSFAFRRVTEVQGGPQQLASSLRSKKTSQADAVSLLRRLDKLICTGTRCK--------------------------------VDRKTLNT-ITGQVVNLAARDMMSLWRLYVKGLKRMMKGGYKD-GKMATPEEVSQLLKQYSKTQDMVQAYLVYHKK--IVRDRAMFDDNQIDSTALEDFLS 1455
            LVP+RRG+      K S+L+G+A++V  +A++MQE +KGK  EWR I K  V  SS+ E+FM+Q+TWPDD  +D ++  D M++L++A + P   +P NP +R LRKLW RM+E+D                     K+L ++HH  IDL P+A  R R   L+MR E N K  NE+YF+  RIMDV++ G PF+P +++Y+S+AF+R T   GG + ++ +L++KKT +  AV LL+ +D ++  G                                    VDRK L T +T   +   A DM+ LWR+Y  G++R+ +GG+   G     +   +LL  Y+ T+  V AYL   KK  +VRD + F+DNQ+   ALE  L+
Sbjct:   96 LVPARRGKGRGPPAKSSLLSGLASSVLEKASSMQEASKGKAMEWRKIVKGKV--SSQFERFMLQLTWPDDVPVDPVFTTDMMHYLDTADDYPDEMAPTNPYRRTLRKLWARMSEKDXXXXXXXXXXXXXXXXXXXXXKSLMLVHHMGIDLGPDASMRARTHILRMRKEVNSKKGNEMYFQLQRIMDVNAVGEPFVPFIKAYASYAFKRATMFVGGLKVVSQTLKAKKTQEGTAVELLQTIDAMLNQGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRKELVTDLTRAALQYTAGDMLELWRVYAAGVQRLAEGGFAGAGGKGAKDGKQRLLSGYASTRSAVSAYLDQCKKMKLVRDLSKFEDNQVSDAALEQCLA 477

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BLAST of mRNA_H-paniculata_contig1789.4294.1 vs. uniprot
Match: D7G759_ECTSI (Weakly similar Glutamic acid-rich protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G759_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 7.100e-9
Identity = 62/247 (25.10%), Postives = 108/247 (43.72%), Query Frame = 1

Query:  523 GIAATVKGRAAAMQEDAKGKMTEWRNIAKTTVWFSSKMEKFMIQMTWPDDGVLDDIWVKDTMNFLESAGNEPPRSPNNPNKRIL-RKLWLRMTEQDYRTKLKALQILHHTSIDLSPEALTRVRNQFLKMRDETNHKNRNEVYFEPSRIMDVSSSGMPFLPLLRSYSSFAFRRVTEVQGGPQQLASSLRSKKTSQADAVSLLRRLDKLICTGTRCKVDRKTLNTITGQVVNLAARDMMSLWRLYVKGL 1260
            G AA   G+A ++      K+     +  +  W     E  ++++TWPDD   D+  V   ++ +++   +   + N+   R+L RKLW +M+E D+RT  KA+ + H    DL  E    ++    KM  E + K     YF+   +  VS  G  F   +  Y ++ F+R        Q+L +  R +     + V+ L +  K I  G  C+   +    +T   +   A D+  LWR +   L
Sbjct:  230 GTAAEAVGQAGSLAASTSQKLKREVKLVVSGSW-----ESALLKVTWPDDLPPDETLVLSMVDAVKTFKKDRDVTKNSAEHRVLLRKLWAKMSEPDWRTVSKAVYLFHSILRDLPVEHHAILKIFLAKMSREWDKKTACR-YFDLDVLCRVSEEGEAFRSFVDRYGTYVFKRAEGFNARFQELDTMQREE--GWENVVTTLAKAQKAIDLGVSCQPQPEEETELTVLCLRNTALDLHQLWRRFHSSL 468

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BLAST of mRNA_H-paniculata_contig1789.4294.1 vs. uniprot
Match: A0A7S2EXR9_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EXR9_TRICV)

HSP 1 Score: 65.1 bits (157), Expect = 2.130e-7
Identity = 65/252 (25.79%), Postives = 108/252 (42.86%), Query Frame = 1

Query:  625 SSKMEKFMIQMTWPDDGVLDDIWVKDTMNFLESAGNEPPRSPNNPNKRILRKLWLRMTEQDYRTKLKALQILHHTSIDLSPEALTRVRNQFLKMRDETNHKNRNEVYFEPSRIM--DVSSSGMPFLPLLRSYSSFAFRRVTEVQG-----GPQQLASSLRSKKTSQADAVSLLRRLDKL------ICTGTRCKVDRKTLNTITGQVVNLAARDMMSLWRLYVKGLKRMMKGGYKDGKMATPEEVSQLLKQYS 1341
            SS++E+ M++ T PDD  +    V+  +                    +LRK+W +MTE+D+RTK+KAL +LH  S D +P+    ++ +  ++R  T    R E YF   +++  D S   + +   +  Y+ +   R     G     G +   SS  S ++S     S   R + L      +  GT C +        T   V   A D++ L      GL R +KG   +G  A P  + +  + YS
Sbjct:  104 SSELEQVMLKATKPDDTPVKGKHVERLVGVTYQISGRYDIYDA-----VLRKVWAKMTEKDWRTKVKALYVLHRFSSDGAPDHQAALKARLRELR-RTRDPKRKEKYFNSKQLLAGDASPDNVKYRAFMARYAHYVLLRAQCFGGMFNEIGQEPPTSSKSSSRSSAKPITSAALRPEHLDAAQMILKAGTACALKDGEECENTCFCVERVASDLIGLTGAVASGLNRALKGKGAEG--ADPAVIKRWCEFYS 347

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BLAST of mRNA_H-paniculata_contig1789.4294.1 vs. uniprot
Match: A0A7S1UKU7_9STRA (Hypothetical protein n=3 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UKU7_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.150e-6
Identity = 70/284 (24.65%), Postives = 118/284 (41.55%), Query Frame = 1

Query:  478 LVPSRRGQPKPSMLAGIAATVKGRAAAMQEDAKGKMTEWRNIAKTTVWFSSKMEKFMIQMTWPDDGVLDDIWVKDTMNFLESAGNEPPRSPNNPNKRILRKLWLRMTEQDYRTKLKALQILHHTSIDLSPEALTRVRNQFLKMRDETNHKNRNEVYFEPSRIMDVSSS--GMPFLPLLRSYSSFAFRRVTEVQGGPQQLA--------SSLRSKK--TSQADAVSLLRRLDKLICTGTRCKVDRKTLNTITGQVVNLAARDMMSLWRLYVKGLKRMMKGGYKDG 1293
            L   R   P PS +  +A  V    AA +  +K     +R +   T   SS++E+ M++ T PDD  +    V+  +                    +LRKLW +  E+D+RTK+KAL ILH  S D +PE    +  +  ++R  ++ K + + YF   +++ V ++     F   +  Y+ +   R     G   ++         SS R  K  TS +     L     ++  G  C++    +   T   V   A D+++L       L R +KG   DG
Sbjct:  184 LTAIRDSMPDPSTVRDVA--VGSLKAARETSSKLTHNIYREVKGLT---SSELEQVMLKATRPDDTPVKGKHVERLVGVTYQVSARYDLYTG-----VLRKLWAKTAEKDWRTKVKALYILHRYSSDGAPEHKDALIKRLRELRRTSDPKRKGKKYFNKQQLLAVENTPENEAFRGFVGRYAHYVLARTQSFGGMFVEIGEAPRPPPKSSNRPPKPLTSTSLKQEHLVNAKMVLTAGLACQLKDDEVTENTAIAVERVASDLIALSSAVAMALNRALKGNSSDG 457

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BLAST of mRNA_H-paniculata_contig1789.4294.1 vs. uniprot
Match: A0A7S2V420_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V420_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 3.820e-6
Identity = 53/215 (24.65%), Postives = 98/215 (45.58%), Query Frame = 1

Query:  619 WFSSKMEKFMIQMTWPDDGVLD----DIWVKDTMNFLESAGNEPPRSPNNPNKRILRKLWLRMTEQDYRTKLKALQILHHTSIDLSPEALTRVRNQFLKM-RDETNHKNRNEVYFEPSRIMDVSSSGMPFLPLLRSYSSFAFRRVTEVQGGPQQLASSLRSKKTSQADAVSLLRRLDKLICTGTRCKVDRKTLNTITGQVVNLAARDMMSLWRLY 1248
            +F+  +   + ++T PDD   D    +  V  T  F++   NE   S +NP + IL  +W R+ E+D+RT +K L +LH    D++PE        F KM R+E +H     +YF    ++ +++ G  +   +RSY  +  +R         +L   L  ++    + +  + +  K +     C   R+    ++   + L A D+  LW L+
Sbjct:  249 YFARDINAAIYKVTRPDDYRPDLRTVESIVSQTQQFVQ---NEDVTSNSNPFRLILTSIWERVMEEDWRTTIKGLALLHKLLRDVNPENALCFNKLFNKMSREECDHA--GHMYFSLPPVVRLNAEGQAWSRFMRSYFRYVRKRAKTFTSQFAELEL-LGFEEMHPEEIIFAVLKARKNVEAILACAFPREEYAEVSMWCLELLAEDLHHLWHLF 457

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BLAST of mRNA_H-paniculata_contig1789.4294.1 vs. uniprot
Match: A0A835ZEZ8_9STRA (ENTH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEZ8_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 7.350e-6
Identity = 54/227 (23.79%), Postives = 97/227 (42.73%), Query Frame = 1

Query:  607 KTTVWFSSKMEKFMIQMTWPDDGVLDDIWVKDTMNFLESAGNEPPRSPNNPNKRI-LRKLWLRMTEQDYRTKLKALQILHHTSIDLSPEALTRVRNQFLKMRDETNHKNRNEV--------YFE----PSRIMDVSSSGMPFLPLLRSYSSFAFRRVTEVQGGPQQLASSLRSKKTSQADAVSLLRRLDKLICTGTRCKVDRKTLNTITGQVVNLAARDMMSLWRLY 1248
            K  ++ S   E  +++ TWPDD   D   V   +  + S   +   +  +   R+ LRKLW +M E D+RTK+K+  ILH    +L P     ++    K+R E + +    V        YF+     + +    +    F   +RSY ++  RR  +  G  ++L        +S    +S+L +  K +     C++     + +T   + L   D   L+RL+
Sbjct:  202 KVKMFTSGTWETALLKATWPDDAPPDAALVGQIVYGVRSFRPDMDVTKQSAEHRVFLRKLWAKMREPDWRTKVKSCYILHRVLRELPPRDDAVLKKHMGKLRRERSKRPAGAVGGGGDRPRYFDLAAAVAEVGPAPADARTFGGFVRSYVTYVLRRSQQFGGKFEELQGV--GPGSSYEHVISVLVKARKALEAAMACQISADQESEVTLLALQLVCMDAAKLFRLF 426

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BLAST of mRNA_H-paniculata_contig1789.4294.1 vs. uniprot
Match: A0A7R9ZH59_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZH59_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 8.360e-6
Identity = 60/232 (25.86%), Postives = 98/232 (42.24%), Query Frame = 1

Query:  403 SGPRKVEASESGSRERRRNRAHGMELVPSRRGQPKPSMLAGIAATVKGRAAAMQEDAKGKMTEWRNIAKTTVWFSSKMEKFMIQMTWPDDGVLDDIWVKDTMNFLESAGNEPPRSPNNPNKRILRKLWLRMTEQDYRTKLKALQILHHTSIDLSPEALTRVRNQFLKMRDETNHKNRNEVYFEPSRIM--DVSSSGMPFLPLLRSYSSFAFRRV-------TEVQGGPQQLA 1071
            SG R V  S   SR+ ++  A    L   R   P P+ +   A       AA +  +K     +R +   T   SS++E+ M++ T P+D  +    V+  +                    +LRKLW +M E+D+RTK+KAL +LH  S D +P+    ++ +  ++R  T    R E YF   +++  D S     +   L  Y+ +   R         E+ G P   A
Sbjct:   14 SGGRVVPYSRGRSRQAQQPGAFTRGLTALRESIPDPTAVKDAAFAAAS--AAKETTSKLSANVYREVKGLT---SSELEQVMLKATQPNDAPVKGKHVERLVGVTYQISGRYDIYDA-----VLRKLWSKMAEKDWRTKIKALYVLHRFSADGAPDHQAALKARLRELR-RTRDPKRKEKYFNSKQLLGGDASPENAKYRAFLARYAHYVLLRAQCFGGMFNEISGDPASAA 234

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BLAST of mRNA_H-paniculata_contig1789.4294.1 vs. uniprot
Match: A0A7S4VB79_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VB79_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.460e-5
Identity = 59/207 (28.50%), Postives = 91/207 (43.96%), Query Frame = 1

Query:  532 ATVKGRAAAMQEDAKGKMTE-----WRNIAKTTVWFSSKMEKFMIQMTWPDDGVLDDIWVKDTMNFLESAGNEPPRSPNNPNKRILRKLWLRMTEQDYRTKLKALQILHHTSIDLSPEALTRVRNQFLKMRDETNHKNRNEVYFEPSRIM--DVSSSGMPFLPLLRSYSSFAFRRV-------TEVQGGPQQLASSLRSKKTSQADA 1110
            ATV+  A +     K K T+     +R I   T   SS++E+ M++ T PDD  +    V+  +                    +LRKLW +M E+D+RT +KAL ILH  S D  P+    ++ +  ++R  T    R E YF   +++  D +    PF   +  Y+ +   R        TE++  P    S   SKK S A A
Sbjct:  253 ATVRDAATSSITAVKDKSTKISSGIYREIKGLT---SSELEQVMLKATRPDDQPVKGKHVERLVGVTYQISGRYDIYDA-----VLRKLWNKMAEKDWRTTIKALYILHRFSSDGGPDHQAALKARLRELR-RTRDPKRKEKYFNSKQLLEGDATPENQPFRAFMARYAHYVLLRAQCFGGMFTEIKENPSAPPS---SKKPSAAAA 447

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BLAST of mRNA_H-paniculata_contig1789.4294.1 vs. uniprot
Match: A0A7S4NIW1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NIW1_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.840e-5
Identity = 73/289 (25.26%), Postives = 115/289 (39.79%), Query Frame = 1

Query:  532 ATVKGRAAAMQEDAKGKMTEWRNIAKTTVWFSSKMEKFMIQMTWPDDGVLDDIWVKDTMNFLESAGNEPPRSPNNPNKRILRKLWLRMTEQDYRTKLKALQILHHTSIDLSPEALTRVRNQFLKMRDETNHKNRNEVYFEPSRIM--DVSSSGMPFLPLLRSYSSFAFRRV-------TEVQGGPQQ---------LASSLRSKKTSQADAVSLLRRLDKLICTGTRCKVDRKTLNTITGQVVNLAARDMMSLWRLYVKGLKRMMKG-GYKDGKMATPEEVSQLLKQYS 1341
            A V   AAA +  +K     +R +   T   SS++E+ M++ T P D  +    V+  +                    +LRKLW +MTE+D+RTK KAL ILH  S D +P+    ++ +  ++R  T    R E YF   +++  D S     +   L  Y+ +   R        +E+   P +              R   TS A     L     ++ +G  C +        T   V   A D++ L       L R +K  G  DG  + P  V+Q  + YS
Sbjct:  199 AAVAAAAAARETTSKLSSNVYREVKGLT---SSELEQVMLKATKPGDTPVKGKHVERLVGVTYQISGRYDIYDA-----VLRKLWAKMTEKDWRTKTKALYILHRFSSDGAPDHQAALKARLRELR-RTRDPKRKEKYFNSKQLLGGDASVESAKYRAFLARYAHYVLLRAQCFGGMFSEISEDPSKSXXXXXXXXXXXXXRKPATSAALRPEHLEAAQMILKSGCACVLKDGEACENTASCVERVAADLVGLVGAVAAALNRSLKNDGPNDG--SDPAVVAQWCEFYS 476

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig1789.4294.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig1789.4294.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15


Match Name	E-value	Identity	Description
D8LRS8_ECTSI	3.620e-194	67.46	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835YKQ2_9STRA	1.310e-62	37.24	ANTH domain-containing protein n=1 Tax=Tribonema m...	[more]
D7G759_ECTSI	7.100e-9	25.10	Weakly similar Glutamic acid-rich protein n=2 Tax=...	[more]
A0A7S2EXR9_TRICV	2.130e-7	25.79	Hypothetical protein (Fragment) n=1 Tax=Trieres ch...	[more]
A0A7S1UKU7_9STRA	1.150e-6	24.65	Hypothetical protein n=3 Tax=Grammatophora oceanic...	[more]
A0A7S2V420_9STRA	3.820e-6	24.65	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A835ZEZ8_9STRA	7.350e-6	23.79	ENTH domain-containing protein n=1 Tax=Tribonema m...	[more]
A0A7R9ZH59_9STRA	8.360e-6	25.86	Hypothetical protein (Fragment) n=1 Tax=Pseudictyo...	[more]
A0A7S4VB79_9STRA	1.460e-5	28.50	Hypothetical protein n=1 Tax=Ditylum brightwellii ...	[more]
A0A7S4NIW1_9STRA	1.840e-5	25.26	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig1789	contig	H-paniculata_contig1789:14591..19784 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	signal peptide
Ec32 ortholog description	conserved unknown protein
Ec32 ortholog	Ec-08_002290.1
Exons	11
Model size	1966
Cds size	1467
Stop	1
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622929396.1484761-UTR-H-paniculata_contig1789:14590..14674	1622929396.1484761-UTR-H-paniculata_contig1789:14590..14674	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig1789 14591..14674 +
1691480843.7443035-UTR-H-paniculata_contig1789:14590..14674	1691480843.7443035-UTR-H-paniculata_contig1789:14590..14674	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig1789 14591..14674 +
1622929398.0183258-UTR-H-paniculata_contig1789:19369..19784	1622929398.0183258-UTR-H-paniculata_contig1789:19369..19784	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig1789 19370..19784 +
1691480843.8367836-UTR-H-paniculata_contig1789:19369..19784	1691480843.8367836-UTR-H-paniculata_contig1789:19369..19784	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig1789 19370..19784 +

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig1789.4294.1	prot_H-paniculata_contig1789.4294.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig1789 14675..19369 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig1789:14591..19784+
coding sequence from alignment at H-paniculata_contig1789:14591..19784+

protein sequence of mRNA_H-paniculata_contig1789.4294.1

>prot_H-paniculata_contig1789.4294.1 ID=prot_H-paniculata_contig1789.4294.1|Name=mRNA_H-paniculata_contig1789.4294.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=489bp
MGHLRLKLLAMAVASVLVLDCAIAASKGASRSGGHRRTSTPTSSHSRRSH
KEREEDWESPECEVSAGTVGKVTRRPTRGKNDKKVQREGSTSRRKHAYPS
SSSASRSGPRKVEASESGSRERRRNRAHGMELVPSRRGQPKPSMLAGIAA
TVKGRAAAMQEDAKGKMTEWRNIAKTTVWFSSKMEKFMIQMTWPDDGVLD
DIWVKDTMNFLESAGNEPPRSPNNPNKRILRKLWLRMTEQDYRTKLKALQ
ILHHTSIDLSPEALTRVRNQFLKMRDETNHKNRNEVYFEPSRIMDVSSSG
MPFLPLLRSYSSFAFRRVTEVQGGPQQLASSLRSKKTSQADAVSLLRRLD
KLICTGTRCKVDRKTLNTITGQVVNLAARDMMSLWRLYVKGLKRMMKGGY
KDGKMATPEEVSQLLKQYSKTQDMVQAYLVYHKKIVRDRAMFDDNQIDST
ALEDFLSIVATEDFVAEGDKVAAEEDGSGEEEGRYGEY*

mRNA from alignment at H-paniculata_contig1789:14591..19784+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig1789.4294.1 ID=mRNA_H-paniculata_contig1789.4294.1|Name=mRNA_H-paniculata_contig1789.4294.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5194bp|location=Sequence derived from alignment at H-paniculata_contig1789:14591..19784+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCAGCATCGTCCATCAGTTGACAGGTAGAAGCCTACTAGCTTCAACTGTC
CCGCGACCGTCCAGGACGGGGGCTATCCACTGCCATGGGTCACCTTCGAT
TGAAACTGCTCGCCATGGCAGTGGCTTCTGTCTTGGTACTTGATTGTGCC
ATCGCTGCATCCAAAGGGGCGTCGCGAAGTGGCGGCCATCGCCGCACATC
AACTCCTACGAGCAGTCATTCTAGGCGCAGCCACAAGGAAAGGGAAGAGG
ACTGGGAGTCCCCCGAATGCGAAGTCTCAGCGGGTACAGTAGGGAAGGTT
ACTCGACGCCCAACGAGAGGAAAAAATGACAAGAAGGTGCAGAGAGAAGG
CTCCACAAGCCGCCGGAAGCATGCGTACCCATCCTCTTCATCTGCGTCTC
GCTCGGGCCCAAGGTTAGAATCTCTAACATGACAGCATAATGTATGGCAA
TACAGTAAATATGTTGTCGCTGTACTGTACGTCCGTTTCAATCCACTGTC
TGTACGGACTGTCTGTTATGTACAGTGTGTCGGTATCTCCCAACTGGCGT
GAAATAGAAAGGAATTGACGGGCTTAAGAAGGGGAAATATATAGGTCTTG
ATGAACTACTTTTCTCTACTTTTCTCACTATTAGAAATCGTTGTCGGACT
TGGTGGATATGGCTACTCGCAGAAAGGTGGAGGCGAGCGAAAGCGGGAGT
CGGGAACGCCGGAGAAACCGAGCGCATGGCATGGAGCTGGTGCCTAGCCG
AAGAGGGCAACCAAAGCCAAGCATGCTTGCCGGGATTGCAGCTACTGTCA
AGGGTCGTGCTGCGGCGATGCAAGAGGATGCGAAGGGAAAGGTCGGCAGT
TATTATGTTCAGATATACATTGTAAAACGGTTCAATGGTTTTTGCTTGTG
ATCATTTCATGTTCGTGTACTCCACAAATCTCATGTCCGTATCCTGAATA
CATGGCGTTGTCGTTCCCGTGCGCACCCCGGGCGGACCTGCAGATGACAG
AATGGCGGAACATTGCGAAAACGACGGTATGGTTCTCGAGCAAGATGGAG
AAGTTCATGATACAGATGACTTGGCCAGATGACGGTGTGCTGGACGACAT
CTGGGTCAAGGTATGTATAGCATGTAAAAAAATGTTAAGTGTAAGGCCAG
CTATCATGCGTATGCGAATTGGAATCCTCTAGTAGGCCTCTATTTTTTTA
GTGCCAATTTTGAAAAATTATCATCTGTAACCCCAGTTCTCCGTTCGGAT
GAGAATTCAAGCCAAATTATGATCTAGCAAAGCCCAGTTCTTATTTATGA
CTATTCGCACTGCAGAGGGCACTGGGAACGGCAGGCTTCCGATCTTGATC
CGAAACTTGGCACACATCATGTCAGAGAATTGGAGAGTGGGATGCAAAAG
GCTGTGCCTCGATCGGTGTCCTGTGAGTCGAGCCATCCGTGTTGTGGTGT
TGCGCACTCGTGAAATAATGAAAAACGCAGCTTGCTTGCACCTGGTCACA
TCTTGATTTTTGGGTAGGAAAAAAAATCCAATTCTCATCCTTACAACAGT
TGGCCTAAACAAGTGAAATTTGAAGTCACCTGTATAGCCTCAGCAATGGT
ACAGTGGAGCTTCAATTCAATTGCCCCCCCTCCCTCCCCCAAACCACTTT
ATCGCACTTCTTTGGGCATGGTTTGGGCCCTGCCTTCTGTGACACCCCTT
GCATTGGCTCCAAATCTGGCTTGTCGTTTTAGGTTTTTTGCTGGTTGTTT
GGTCGGGAAGCAGATGGTGTATATATCTTGCTTCTCAGCGTGCTATGTAA
TTGATCCGTGGAAATATACCGTCCGGTCTATATGTGTATAATGGACTTGG
TAACAGGACACGATGAATTTCTTGGAGAGCGCTGGAAACGAACCGCCACG
ATCGCCCAATAATCCGAACAAACGGATCCTCCGCAAGCTGTGGTTGCGAA
TGACTGAACAGGACTACCGCACCAAGTTGAAGGCACTGCAGATATTGCAC
CACACCTCGATAGACTTGAGTCCGGAAGCTCTCACCAGGTACGGCGTAAA
TGGTACATCATACTCGTTTGCCCAAGTAATTTTGCGAACGTCTTTTTTTA
GCTACCCAGCCCCTGTCGTCTGTCGCGGCATGCATAGGTGTAGTAACGAC
AAATTGTGCCGCTTGTTTTCGTGTGACATTGCCCGCGTAGGGTGCGAAAC
CAGTTCTTGAAGATGAGGGATGAGACTAACCACAAGAACCGCAACGAGGT
CTACTTCGAGGTAAGATCAAGGGACGACAACCGGTGTAACAGAGACAATC
CGTCACCAATGATAAGTGTCATGCTTATCTTTGCTTGTGCTGGCACAAAA
CCCTTGACCCTGAACCACCCTGGCCCGTGACAAAATGCAGCCTTCAAGGA
TCATGGATGTTTCCAGCTCCGGGATGCCCTTCCTGCCTTTGCTACGCTCA
TACTCCTCGTTCGCCTTCCGGAGGGTGACAGAGGTACAAGGTGGACCCCA
GCAGGTAAACGATGCAACTTTTCCTCTCGTCGTGCTTATACTAGTCAAAA
TCAAATCACCAAAGGTTTGGAAAGTCGCTTTTATCCAAAGACAAGAGAGC
TTGCATGTCGTCTATCTATCGACAATTCTCGGCGAGATCTTTGCGAGGAG
TCATCTGTATCTTTTTTGGCGATCCGACGTATTTTATATGTTTGGTTGTT
TATTTCCGGACACACATTCGCAAATCGTGTTTGGATCATGGGTGTCTCAA
TCTCTCGTGTTGCCGTTTTCAATTGCAGCTGGCATCATCCCTCCGTAGCA
AGAAGACGTCTCAGGCGGATGCTGTCTCCTTGTTGCGCCGCCTAGACAAA
CTCATCTGCACTGGTACCAGGTGCAAGGTGAGCAAAGCGGTCCCCACGGC
GGATCATGGAGTTCGAGCAAAATGTGTACTGTTAGTCGTTTTTATGTCGG
GCCCCTGTTTTATGGGCACAACAGTAGACGCGTAGTTTCGACAGCGAGAA
CGAGAGCAGACAAAGTCATGGTACAAAACTTTCTGTATTTCGCTGTCTGC
ACCGACTATCCTGCGGGTGTCGAAACACCGCCGTGAGAGTCATGGTGTTT
TTGATTATTACGGAGGCACATTGTTAACATGACGAAATTGTTGGTCTTTT
GCCCAATGTGCCCCCATTCAAGTTTGTGTATCTCCATAATCCCCGGGTTA
AATCGAAAACTGAAACCTGAGAGCACATCGCATGATCGAGACGGTTCCAC
ACATATAGGTTCCGCATGTTGATTCGGTGGAACGGGGTCAGATTTTCCCC
CAGCAGTAGAGCAACCGTTTGATGCTATTAACAGTGTGCCTCGATAATAA
ACGGGGCTGGTGGTTTATGCTTTGCGTTGCAAGCAAGTGTTTCCTCGAAC
GTAGATCAATGCGAACTCCTGTCTGTATATGTCTGCAATAATTTTAAAGA
CCATCCGTACCCCCCTGTAGAGTTGCGCCCTCTCCCCACAATCATGTCGT
GGGCTTTAGTCACAAAAAATCCGAATGGGTTTTTGCGTGTTTTTCGGGCA
GTAACTGTGTAGGAAAGGTAGAGGTCCAGATACCGCAAGGGTTGAGACCC
TACGTACACGAACACTGATATCTCCTTGTGATGGTCTCGGGTGCTTTTGA
CATGCGTAACCTCCCGTTAGCAGCAATGGTGTTTAGGTGAGCGCACCTTT
CAGTGACTAATTTGGAGTACCACACAATGGCTAACAGCAACAGCGCCTTC
CCCATCCGTAGGTGGACCGCAAGACCTTGAACACCATCACCGGCCAAGTC
GTGAACCTCGCAGCGCGAGACATGATGAGCCTTTGGAGATTGTACGTGAA
GGTAAATCGTGTCATTTTGCGGCGACTGGACGTGAAGTGGTGGGCATCCG
TTTCGAGGCGGTCCTAGCACAATTCAAATTGTGTGGTAGTGATACCTACG
TTACAGTACAAATTTATGCCGCATAATTTAGGGTGCATGGAACTCTTCCA
TCTGGTCAGTATGTCGTGCCATAACACCATCTATCTGTGTGCTTTTTGTC
ACTCACCTGTGTGCAACTGGTTTTTGCAGGGGTTGAAGAGAATGATGAAG
GGTGGTTACAAAGACGGGAAAATGGCTACTCCGGAGGAAGTGTCCCAACT
TCTCAAGCAATACAGCAAAACGCAGGATATGGTCCAAGCGTGAGTGCACC
TTATTGTCCGAGTTGGAAGAAAGTGGAGAGGACTGTTTGCACAAGATGCA
ACCGTTTATTTGAACACTATTTTTTATTCTTCCACTCTTCCCGTCATGTC
ATTTTGCAGGTACCTGGTGTATCACAAAAAGATTGTGCGGGATCGTGCCA
TGTTCGACGACAACCAAATAGATTCTACGGCATTGGAAGATTTCTTGTCG
ATTGTGGCGACAGAAGATTTTGTCGCGGAGGGTGATAAGGTGAAGGAAAT
AGTCTACGATAGTAGTCATAATGCGTATAAGAGGGATGTGGATATTTCCG
GCATATATTCGTTCCTTTTTCCTCTTTCCTTCCATTTGTTGATGTGGCAT
ATATTTCAAACGCGCATATGGAGAGAGAAATTGTAAGTGCATACGATATT
CCAGGATATGTTGTGCCCACTGTTCGGATATATTTATTTTCTACTATGTA
TCGATTTAGACAAGAGTGTTCGATATGGTGTATTTATCATTCCATCCGAA
CGGATTGCTTAATACGAAACAGGTCGCTGCCGAAGAAGATGGTTCTGGAG
AAGAGGAAGGAAGATATGGAGAATATTGAGTAGCGTAGCATGGTGATTAG
GAGATGGGTGTGATAACAACGGCAGAAGAGTAACACACAAGATATGACGT
GTCTGCAACTAGGTTATATGTTGGGATGGTTGAATCTGTGGACAAGTCAT
TTTGAAAAGAGATGTATACGATATGTGGGAGAGTATGTGGTGTACATCCT
ACAATCCACTGACATGTACCTATCGAAGGCGCGAATAAATACGTTTGCGC
TGGAATGACAACTGTTCACTGTTCAAGAGGGGTAAATATCGTGTGCCACG
TACACGATATATGCACTGCACTTGATATATCGTAGGGAAAAGAAACGAGC
GCTGTTCGAATGATCATTCACACTGTACGGTATTATCCATGAAGTAGAAA
TCACACGTATGATCATTCTCTAGGAAATACGACGATAATTAGCG

Coding sequence (CDS) from alignment at H-paniculata_contig1789:14591..19784+

>mRNA_H-paniculata_contig1789.4294.1 ID=mRNA_H-paniculata_contig1789.4294.1|Name=mRNA_H-paniculata_contig1789.4294.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2934bp|location=Sequence derived from alignment at H-paniculata_contig1789:14591..19784+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGTCACCTTCGATTGAAACTGCTCGCCATGGCAGTGGCTTCTGTCTT
GGTACTTGATTGTGCCATCGCTGCATCCAAAGGGGCGTCGCGAAGTGGCG
GCCATCGCCGCACATCAACTCCTACGAGCAGTCATTCTAGGCGCAGCCAC
AAGGAAAGGGAAGAGGACTGGGAGTCCCCCGAATGCGAAGTCTCAGCGGG
TACAGTAGGGAAGGTTACTCGACGCCCAACGAGAGGAAAAAATGACAAGA
AGGTGCAGAGAGAAGGCTCCACAAGCCGCCGGAAGCATGCGTACCCATCC
TCTTCATCTGCGTCTCGCTCGGGCCCAAGATGGGTCACCTTCGATTGAAA
CTGCTCGCCATGGCAGTGGCTTCTGTCTTGGTACTTGATTGTGCCATCGC
TGCATCCAAAGGGGCGTCGCGAAGTGGCGGCCATCGCCGCACATCAACTC
CTACGAGCAGTCATTCTAGGCGCAGCCACAAGGAAAGGGAAGAGGACTGG
GAGTCCCCCGAATGCGAAGTCTCAGCGGGTACAGTAGGGAAGGTTACTCG
ACGCCCAACGAGAGGAAAAAATGACAAGAAGGTGCAGAGAGAAGGCTCCA
CAAGCCGCCGGAAGCATGCGTACCCATCCTCTTCATCTGCGTCTCGCTCG
GGCCCAAGAAAGGTGGAGGCGAGCGAAAGCGGGAGTCGGGAACGCCGGAG
AAACCGAGCGCATGGCATGGAGCTGGTGCCTAGCCGAAGAGGGCAACCAA
AGCCAAGCATGCTTGCCGGGATTGCAGCTACTGTCAAGGGTCGTGCTGCG
GCGATGCAAGAGGATGCGAAGGGAAAGAAAGGTGGAGGCGAGCGAAAGCG
GGAGTCGGGAACGCCGGAGAAACCGAGCGCATGGCATGGAGCTGGTGCCT
AGCCGAAGAGGGCAACCAAAGCCAAGCATGCTTGCCGGGATTGCAGCTAC
TGTCAAGGGTCGTGCTGCGGCGATGCAAGAGGATGCGAAGGGAAAGATGA
CAGAATGGCGGAACATTGCGAAAACGACGGTATGGTTCTCGAGCAAGATG
GAGAAGTTCATGATACAGATGACTTGGCCAGATGACGGTGTGCTGGACGA
CATCTGGGTCAAGATGACAGAATGGCGGAACATTGCGAAAACGACGGTAT
GGTTCTCGAGCAAGATGGAGAAGTTCATGATACAGATGACTTGGCCAGAT
GACGGTGTGCTGGACGACATCTGGGTCAAGGACACGATGAATTTCTTGGA
GAGCGCTGGAAACGAACCGCCACGATCGCCCAATAATCCGAACAAACGGA
TCCTCCGCAAGCTGTGGTTGCGAATGACTGAACAGGACTACCGCACCAAG
TTGAAGGCACTGCAGATATTGCACCACACCTCGATAGACTTGAGTCCGGA
AGCTCTCACCAGGACACGATGAATTTCTTGGAGAGCGCTGGAAACGAACC
GCCACGATCGCCCAATAATCCGAACAAACGGATCCTCCGCAAGCTGTGGT
TGCGAATGACTGAACAGGACTACCGCACCAAGTTGAAGGCACTGCAGATA
TTGCACCACACCTCGATAGACTTGAGTCCGGAAGCTCTCACCAGGGTGCG
AAACCAGTTCTTGAAGATGAGGGATGAGACTAACCACAAGAACCGCAACG
AGGTCTACTTCGAGGGTGCGAAACCAGTTCTTGAAGATGAGGGATGAGAC
TAACCACAAGAACCGCAACGAGGTCTACTTCGAGCCTTCAAGGATCATGG
ATGTTTCCAGCTCCGGGATGCCCTTCCTGCCTTTGCTACGCTCATACTCC
TCGTTCGCCTTCCGGAGGGTGACAGAGGTACAAGGTGGACCCCAGCAGCC
TTCAAGGATCATGGATGTTTCCAGCTCCGGGATGCCCTTCCTGCCTTTGC
TACGCTCATACTCCTCGTTCGCCTTCCGGAGGGTGACAGAGGTACAAGGT
GGACCCCAGCAGCTGGCATCATCCCTCCGTAGCAAGAAGACGTCTCAGGC
GGATGCTGTCTCCTTGTTGCGCCGCCTAGACAAACTCATCTGCACTGGTA
CCAGGTGCAAGCTGGCATCATCCCTCCGTAGCAAGAAGACGTCTCAGGCG
GATGCTGTCTCCTTGTTGCGCCGCCTAGACAAACTCATCTGCACTGGTAC
CAGGTGCAAGGTGGACCGCAAGACCTTGAACACCATCACCGGCCAAGTCG
TGAACCTCGCAGCGCGAGACATGATGAGCCTTTGGAGATTGTACGTGAAG
GTGGACCGCAAGACCTTGAACACCATCACCGGCCAAGTCGTGAACCTCGC
AGCGCGAGACATGATGAGCCTTTGGAGATTGTACGTGAAGGGGTTGAAGA
GAATGATGAAGGGTGGTTACAAAGACGGGAAAATGGCTACTCCGGAGGAA
GTGTCCCAACTTCTCAAGCAATACAGCAAAACGCAGGATATGGTCCAAGC
GGGTTGAAGAGAATGATGAAGGGTGGTTACAAAGACGGGAAAATGGCTAC
TCCGGAGGAAGTGTCCCAACTTCTCAAGCAATACAGCAAAACGCAGGATA
TGGTCCAAGCGTACCTGGTGTATCACAAAAAGATTGTGCGGGATCGTGCC
ATGTTCGACGACAACCAAATAGATTCTACGGCATTGGAAGATTTCTTGTC
GATTGTGGCGACAGAAGATTTTGTCGCGGAGGGTGATAAGGTACCTGGTG
TATCACAAAAAGATTGTGCGGGATCGTGCCATGTTCGACGACAACCAAAT
AGATTCTACGGCATTGGAAGATTTCTTGTCGATTGTGGCGACAGAAGATT
TTGTCGCGGAGGGTGATAAGGTCGCTGCCGAAGAAGATGGTTCTGGAGAA
GAGGAAGGAAGATATGGAGAATATTGAGTCGCTGCCGAAGAAGATGGTTC
TGGAGAAGAGGAAGGAAGATATGGAGAATATTGA