mRNA_H-paniculata_contig1789.4293.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1789.4293.1 vs. uniprot
Match: A0A6H5J6N0_9PHAE (Epimerase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J6N0_9PHAE) HSP 1 Score: 590 bits (1522), Expect = 2.540e-207 Identity = 284/353 (80.45%), Postives = 317/353 (89.80%), Query Frame = 2
Query: 47 GAEVARSFIVPSFLPVVHISRTTTRRASQRDTVVASAGGKALIAQNKGGGHGELGYHLALQLIEKGISVTLLQDGAGKNKEKQPFASYGDLESRGANIVWGDFSEGVGKLVPEGESFDYIFDNYAKDVETCDDLAQKAKSWGVKNYAYVSSGGMYKDSDEVPFTESSDVKESGQRKVEQHLAGIGLPWTSFRPQYIYGPLTNKRDYLDWFFDRVVHGIELIPLPLHGDQLVTLTHAEDVASMLASVVGNENAVNQVFNCASDRYISYSGLFQAVGKVAEPSVNKMAFYYDPEDYDLKKGWFPFRNNHFFVNSEKAKRLLGWAPKHTITDDLAEYFEGYKAAGKDKAEPDFSTD 1105
G + +F+ PS +PV + RASQ T ++ GKALIAQNKGGGHGELGYHLAL+LIEK ISVTLLQDGAGKNK+ QPFASYGDLES+GA IVWGDFSEGVGKL+PEGESFDY+FDNYAKDV+TC DLA +K+WGVKNYAYVSSGGMYKDSDEVPFTESSDVKESGQR+VE+++A +GLPWTSFRPQYIYGPLTNKRDYLDWFFDRVVHG+E IPLPLHGDQLV LTHAEDVASMLASVVGNE AV+QVFNCASDRYI+Y+GLF+ VGKVA+P+V+KMA+YY+P DYDLKKGWFPFRNNHF VNSEKAKRLLGW+PKHTITDDLAEYFEGYKAAGK +AEP+F D
Sbjct: 17 GVHLGSAFVAPS-IPVGR-QPIASPRASQGFTTMS---GKALIAQNKGGGHGELGYHLALKLIEKDISVTLLQDGAGKNKDNQPFASYGDLESKGATIVWGDFSEGVGKLIPEGESFDYVFDNYAKDVDTCKDLADCSKAWGVKNYAYVSSGGMYKDSDEVPFTESSDVKESGQRQVEKYVADLGLPWTSFRPQYIYGPLTNKRDYLDWFFDRVVHGLEFIPLPLHGDQLVALTHAEDVASMLASVVGNERAVDQVFNCASDRYITYNGLFREVGKVAKPAVSKMAYYYEPRDYDLKKGWFPFRNNHFVVNSEKAKRLLGWSPKHTITDDLAEYFEGYKAAGKVEAEPNFLKD 364
BLAST of mRNA_H-paniculata_contig1789.4293.1 vs. uniprot
Match: A0A836C9R0_9STRA (Epimerase domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9R0_9STRA) HSP 1 Score: 456 bits (1173), Expect = 8.890e-154 Identity = 227/401 (56.61%), Postives = 285/401 (71.07%), Query Frame = 2
Query: 89 PVVHISRTTTRRASQRDTVVASAGGKALIAQNKGGGHGELGYHLALQLIEKGISVTLLQDGAGKNKEKQPFASYGDLESRGANIVWGDFSE--GVGKLVPEGESFDYIFDNYAKDVETCDDLAQKAKSWGVKNYAYVSSGGMYKDSDEVPFTESSDVKESGQRKVEQHLAGIGLPWTSFRPQYIYGPLTNKRDYLDWFFDRVVHGIELIPLPLHGDQLVTLTHAEDVASMLASVVGNENAVNQVFNCASDRYISYSGLFQAVGKVAEPSVNKMAF-YYDPEDYDLKKGWFPFRNNHFFVNSEKAKRLLGWAPKHTITDDLAEYFEGYKAAGKDKAEPDFSTDDAINVSWHHDYVPYMLQQECRRENPNLDQEMAEIAKTYQEGDRHHYSSTLEELQKLYRQ 1282
P+ +R + S R ++ + GKALI QNKGGGHGELGYHLA L EKG+ VTLLQD A K K KQPFASYG+LES+G +VWGDF+ GVG +P E+FDY+FDNYAKD T D+A AKSW VKNY YVSS GMYK+++EVP E+ VKE+GQR+VE +GLPWTSFRPQYIYGPLTNKRDYLDWF+DRVV + PLP HGDQ V +THAEDVASMLA+VVGN +AV Q+FNCAS RYI+Y+ L ++V K + ++ YY P DY +KG+FPFR NHFFV+S+KA RLLGW PKH + DL Y + Y AAGK PDF DD IN+ +YVP+ ++++ ENP L+Q++ I E D+++YS LE+L++ + Q
Sbjct: 22 PMTQQARASALHLSSRSAELSMSAGKALIVQNKGGGHGELGYHLANILQEKGVEVTLLQDSAAK-KAKQPFASYGELESKGVKVVWGDFAGEGGVGASLPSDEAFDYVFDNYAKDPATAKDVAVAAKSWSVKNYVYVSSAGMYKNTEEVPLVETDAVKETGQRQVELMAEEMGLPWTSFRPQYIYGPLTNKRDYLDWFYDRVVWAMSPFPLPHHGDQFVAITHAEDVASMLAAVVGNPSAVGQIFNCASTRYITYNALAKSVAKACGQDPSDISHRYYKPADYGAEKGYFPFRENHFFVSSDKAVRLLGWQPKHDLLQDLEWYRDSYVAAGKADTPPDFLKDDEINII-DPEYVPWTVRRQLAEENPELEQQLTSIRDKMNELDKYYYSGMLEQLKEEHAQ 420
BLAST of mRNA_H-paniculata_contig1789.4293.1 vs. uniprot
Match: A0A7S2XZ15_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ15_9STRA) HSP 1 Score: 356 bits (913), Expect = 8.780e-115 Identity = 178/322 (55.28%), Postives = 223/322 (69.25%), Query Frame = 2
Query: 167 ALIAQNKGGGHGELGYHLALQL----IEKGISVTLLQDGAGKNKEKQPFASYGDLESRGANIVWGDFSEGVGKLVPEGESFDYIFDNYAKDVETCDDLAQKAKSWGVKNYAYVSSGGMYKDSDEVPFTESSDVKESGQRKVEQHLAGIGLPWTSFRPQYIYGPLTNKRDYLDWFFDRVVHGIELIPLPLHGDQLVTLTHAEDVASMLASVVGNENAVNQVFNCASDRYISYSGLFQAVGKVA--EPSVNKMAFYYDPEDYDLKKGWFPFRNNHFFVNSEKAKRLLGWAPKHTITDDLAEYFEGYKAAGKDKAEPDFSTDDAI 1114
ALI QNKGGGHGELGYHLA L + + SVT++ DG + +K PF YG L+ G +++W D + ++F Y+FDNYAKD +TC +A +K W V NY YVSS GMYK +DEVP TES+ KE+GQ+ VE++ A IGLPWT+FRPQYIYGPLTNKRDYLDWFF RV + +PLP GDQ V +THA DVASM ASV+GN+ A QVFNCASDR+++Y GL + V + A +P K+ Y DP DYDL KG FPFR N FFV+S+KAK +LGWAPK+ + +DL YFE YK+ G + E +F DD I
Sbjct: 50 ALIVQNKGGGHGELGYHLAKILSSPEVPQVTSVTIINDGGPEPVQKLPFTEYGGLD--GVDVIWADIKSADIPALLGDKTFKYVFDNYAKDEDTCKAVADLSKKWDVDNYVYVSSAGMYKSTDEVPMTESTATKETGQKAVEEYAASIGLPWTAFRPQYIYGPLTNKRDYLDWFFHRVCRDRD-VPLPNSGDQFVAITHAADVASMFASVIGNDKAPEQVFNCASDRFVTYRGLVKLVAETAGKDPESVKIVNY-DPTDYDLPKGAFPFRPNSFFVSSDKAKNVLGWAPKNGLVEDLKWYFEDYKSLGLLEKEMEFPDDDQI 367
BLAST of mRNA_H-paniculata_contig1789.4293.1 vs. uniprot
Match: A0A7S2BN61_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BN61_9STRA) HSP 1 Score: 349 bits (895), Expect = 1.720e-112 Identity = 178/333 (53.45%), Postives = 224/333 (67.27%), Query Frame = 2
Query: 119 RRASQRDTVVASAGGKALIAQNKGGGHGELGYHLALQLIEKGISVTLLQDGAGKNKE-KQPFASYGDLESRGANIVWGDFSEGVGKLVPEGESFDYIFDNYAKDVETCDDLAQKAKSWGVKNYAYVSSGGMYKDSDEVPFTESSDVKESGQRKVEQHLAGIGLPWTSFRPQYIYGPLTNKRDYLDWFFDRVVHGIELIPLPLHGDQLVTLTHAEDVASMLASVVGNENAVNQVFNCASDRYISYSGLFQAVGKVAEPSVNKMAFYYDPEDYDLKKGWFPFRNNHFFVNSEKAKRLLGWAPKHTITDDLAEYFEGYKAAGKDKAEPDFSTDDAI 1114
+R + VVA G+ALI QNKGGGHGELG+HLA L +KGISVTLL DG + K KQP+ SY LE +G IVW D + + EG +F+Y+FDN++KD ++ AKSW V NY +VSS GMY+ S P ES+DVK SGQRKVE LA GLPWTSFRPQYIYGP TNKRDYLDWFFDR V G + +P+P G Q V++T+A+DVAS+LAS +GN +AV +VFNC +D ++Y + Q VGK V YYDP + L KG FPFRN F+V+ KAK +LG+AP H + DD++ Y+ Y + G DK + D STDD I
Sbjct: 48 QRRGRVSAVVAGGEGRALIIQNKGGGHGELGFHLAGILEKKGISVTLLHDGGPEPKSGKQPWDSYTQLEGKGVEIVWSDVAASGSASLKEGPAFEYVFDNWSKDPDSATGFVDLAKSWDVSNYVFVSSAGMYESSVPQPMVESADVKLSGQRKVEVLLAENGLPWTSFRPQYIYGPNTNKRDYLDWFFDRAVRG-KTLPIPEDGSQGVSITNAQDVASLLASPLGNADAVGEVFNCGTDAVVTYEEVAQLVGKTVGKEVK--VEYYDPAAFKLPKGAFPFRNTAFYVDVSKAKTVLGFAPSHALGDDMSWYYNDYVSLGNDKKDVDLSTDDMI 377
BLAST of mRNA_H-paniculata_contig1789.4293.1 vs. uniprot
Match: I2CPE2_NANGC (NAD(P)-bd_dom domain-containing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPE2_NANGC) HSP 1 Score: 338 bits (868), Expect = 1.590e-108 Identity = 182/367 (49.59%), Postives = 227/367 (61.85%), Query Frame = 2
Query: 29 CLCVLAGAEVA-RSFIVPSFLPVVHISRTTTRRASQRDTVVASAGGKALIAQNKGGGHGELGYHLALQLI-EKGISVTLLQDGAGKNKEKQPFASYGDLESRGANIVWGDFSEGVGKLVPEGESFDYIFDNYAKDVETCDDLAQKAKSWGVKNYAYVSSGGMYKDSDEVPFTESSDVKESGQRKVEQHLAGIGLPWTSFRPQYIYGPLTNKRDYLDWFFDRVVHGIELIPLPLHGDQLVTLTHAEDVASMLASVVGNENAVNQVFNCASDRYISYSGLFQAVGK-VAEPSVNKMAFYYDPEDY--DLKKGWFPFRNNHFFVNSEKAKRLLGWAPKHTITDDLAEYFEGYKAAGKDKAEPDFSTDDAI 1114
CL VLA + ++F+ PS + R + + +AG ALI QNKGGGHGE+GYHLAL+L+ EKG+ VTLL D + +KQPF SYGDL G +I+ D K + G SF Y+FDN+AK E A++W ++ Y +VSSGGMY+ D P E S V + RK+E + GLP+T FRPQYIYGPLT+KRDYLDWFF R+V L PLPLHGDQ TLTH EDVAS+LA+VV N A+ QVFNCASDR I++ G+ G + + YDP + DL KGW+PFRN HF V+ EKAKRLLGW P H + DL EY+ GY AAG DK E F D+ I
Sbjct: 8 CLAVLASCICSSQAFLNPSSFSSSSLLPPPCAPLRSRGSSMMAAGQSALIIQNKGGGHGEIGYHLALKLVKEKGLQVTLLNDKY--DDQKQPFKSYGDLTGAGVDILSADLGSADVKSLLSGRSFHYVFDNFAKSSEALPPFLDLARAWPLQVYVFVSSGGMYQVEDSFPLLEDSPVALNEPRKIELAIEASGLPYTFFRPQYIYGPLTSKRDYLDWFFHRLVRDKPL-PLPLHGDQFTTLTHVEDVASLLAAVVDNPQALRQVFNCASDRCITFKGVVGVAGNAMGRKDAKEAIVLYDPAERKADLPKGWWPFRNTHFNVSPEKAKRLLGWVPAHDLAKDLEEYYRGYVAAGLDKKEMSFEVDEKI 371
BLAST of mRNA_H-paniculata_contig1789.4293.1 vs. uniprot
Match: A0A0G4EVW7_VITBC (NAD(P)-bd_dom domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EVW7_VITBC) HSP 1 Score: 326 bits (835), Expect = 3.560e-104 Identity = 177/323 (54.80%), Postives = 217/323 (67.18%), Query Frame = 2
Query: 155 AGGKALIAQNKGGGHGELGYHLALQLIEKGISVTLLQDGAGKNKEKQPFASYGDLESRGANIVWGDF-SEGVGKLVPEGESFDYIFDNYAKDVETCDDLAQKAKSWGVKNYAYVSSGGMYKDS-DEVPFTESSDVKE-SGQRKVEQHLAGIGLPWTSFRPQYIYGPLTNKRDYLDWFFDRVVHGIELIPLPLHGDQLVTLTHAEDVASMLASVVGNENAVNQVFNCASDRYISYSGLFQAVGKVA--EPS-VNKMAFYYDPEDYDLKKGWFPFRNNHFFVNSEKAKRLLGWAPKHTITDDLAEYFEGYKAAGKDKAEPDFSTD 1105
AG ALI QNKGGGHGELG+HLA QL G +VTLL DG + K PF Y +LE +IVW D ++ V +G++FD +FDN++KD T +A+ AK VK+Y YVSSGGMY+ + DE P E + VK+ SGQR+VE+ L + +PWTSFRPQYIYGP TNKRDYLD+FFDRV HG+ IP+P G L TLT+AEDVASML S VG + A+ +VFNCASDRYISY G+ + V K +PS K YYDP+ L KG FPFRN HF VN EKAK LL W P+H + DDL YF Y++ GK + D S D
Sbjct: 4 AGSSALIVQNKGGGHGELGFHLAKQLRAAGCTVTLLNDG--QPTAKPPFDHYNELEQEYVDIVWTDVKAQRDLSSVLKGKTFDLVFDNWSKDEGTVRPIAEFAKKNNVKHYMYVSSGGMYQPTGDEFPILEKTKVKDDSGQRQVEKTLEAMKVPWTSFRPQYIYGPYTNKRDYLDFFFDRVTHGLP-IPIPYEGATLTTLTNAEDVASMLISAVGKQYAIGEVFNCASDRYISYEGIVRMVAKTVGKDPSEAVKSIVYYDPKRAALPKGAFPFRNTHFCVNPEKAKLLLDWRPQHRLEDDLKWYFAAYRSLGKLAGQVDTSAD 323
BLAST of mRNA_H-paniculata_contig1789.4293.1 vs. uniprot
Match: A0A7S0QRB5_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QRB5_9CRYP) HSP 1 Score: 318 bits (815), Expect = 5.820e-101 Identity = 171/338 (50.59%), Postives = 224/338 (66.27%), Query Frame = 2
Query: 119 RRASQRDTVVASAGGKALIAQNKGGGHGELGYHLALQLIEKGISVTLLQDGAGKNKEKQPFASYGDLESR-GANIV---WGDFSEGVGKLVPEGESFDYIFDNYAKDVETCDDLAQKAKS-WGVKNYAYVSSGGMYKDSDEVPFTESSDVKESGQRKVEQHLAGIGLPWTSFRPQYIYGPLTNKRDYLDWFFDRVVHGIELIPLPLHGDQLVTLTHAEDVASMLASVVGNENAVN-QVFNCASDRYISYSGLFQAVGKVAEPSVNKMAFYYDPEDYDLKKGWFPFRNNHFFVNSEKAKRLLGWAPKHTITDDLAEYFEGYKAAGKDKAEPDFSTDDAI 1114
+RAS + S ALI QNKGGGHGE+GYHLA QL KG++VTLLQD A K +K PF Y L+S+ G ++ D ++ KL G++F ++FDN+AKD T + +A A + W VK+YAYVSSGGMYK P TE + KE+GQR+VEQ LA GLPWTSFRPQYIYGP TNKRDYLDWFF+R+V PLP +G+QL++++H EDVA M+A VVG E A + QVFNC +D Y++Y L + VG+ + Y+P+D+DL KG+FPFR+ F V+ +KAK +LGW+ H I +L Y++ YK AG D+ F TDD I
Sbjct: 7 KRASGHNLATLSMKDAALIVQNKGGGHGEIGYHLAKQLSSKGLAVTLLQDAAAK-MDKPPFNDYELLKSKHGVEVLACKLEDPADIKDKLA--GKAFSHVFDNFAKDKATAETVAGLATAGWDVKSYAYVSSGGMYKSGAAQPMTEDAATKETGQREVEQFLAAAGLPWTSFRPQYIYGPFTNKRDYLDWFFNRIVRD-RPCPLPGNGEQLLSISHVEDVARMMAGVVGKEAAASGQVFNCGTDSYVTYRALCELVGETVGKKPKIVT--YNPKDFDLPKGFFPFRDETFCVSPDKAKAVLGWSKSHWIEKELDWYYDAYKTAGLDRKALTFETDDLI 338
BLAST of mRNA_H-paniculata_contig1789.4293.1 vs. uniprot
Match: A0A7S2U5K3_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2U5K3_9EUKA) HSP 1 Score: 316 bits (810), Expect = 4.980e-100 Identity = 172/343 (50.15%), Postives = 225/343 (65.60%), Query Frame = 2
Query: 101 ISRTTTRRASQRDTVVASAGGKALIAQNKGGGHGELGYHLALQLIEKGISVTLLQDGAGKNKEKQPFASYGDLESRGANIVWGDFSEGVGKLVPEGESFDYIFDNYAKDVETCDDLAQKAKSWGVKNYAYVSSGGMYKDSDEVPFTESSDVKES-GQRKVEQHLAGIGLPWTSFRPQYIYGPLTNKRDYLDWFFDRVVHGIELIPLPLHGDQLVTLTHAEDVASMLASVV-GNENAVNQVFNCASDRYISYSGLFQAVGKVA---EPSVNKMAFYYDPEDYDLKKGWFPFRNNHFFVNSEKAKRLLGWAPKHTITDDLAEYFEGYKAAGKDKAEPDFSTDDAI 1114
I RTT A R V+++ + LI QNKGGGHGE+GYHLA +L G SVT++ D A K + PF+ YGDL+S+G V+ D + G+ FD ++DN+AK +TC A AK WGV +Y YVSS GMYK + +P E+ +VK++ GQ++VE HL +GLPWTSFRPQYIYGPLTNKRDYLD+FFDRVV G +P+ G QLVTLTHA DVA M+AS++ + A QVFNCA+D+ I+ L KVA PS+ +Y+P++ L+K FPFR+NHFFV +KAK +LGW +H + ++ YFEGYKA GKD+ DF DD I
Sbjct: 19 ILRTTKANALSRGVGVSAS--RVLIIQNKGGGHGEIGYHLANKLASDGHSVTIMGDPATK-LQSLPFSRYGDLKSKGVTTVFADPCD-PSSFANLGQ-FDVVYDNFAKGKDTCAVAADLAKQWGVSHYGYVSSAGMYKPGNLMPMVETLNVKDTAGQKEVEDHLDRMGLPWTSFRPQYIYGPLTNKRDYLDYFFDRVVRG-RPVPVAGSGQQLVTLTHAADVAGMMASIIDAGDKAHRQVFNCATDQLITVDTLVALCAKVAGVPTPSI----VHYNPKEVQLEKKAFPFRDNHFFVTPDKAKTVLGWQCEHDLEKEVKAYFEGYKAIGKDQKSMDFPIDDVI 351
BLAST of mRNA_H-paniculata_contig1789.4293.1 vs. uniprot
Match: L1J2X8_GUITC (NAD(P)-bd_dom domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J2X8_GUITC) HSP 1 Score: 313 bits (803), Expect = 1.660e-99 Identity = 166/319 (52.04%), Postives = 214/319 (67.08%), Query Frame = 2
Query: 167 ALIAQNKGGGHGELGYHLALQLIEKGISVTLLQDGAGKNKEKQPFASYGDLESRGANIVWGDFSEGVGKLVP-EGESFDYIFDNYAKDVETCDDLAQKAKS-WGVKNYAYVSSGGMYKDSDEVPFTESSDVKESGQRKVEQHLAGIGLPWTSFRPQYIYGPLTNKRDYLDWFFDRVVHGIELIPLPLHGDQLVTLTHAEDVASMLASVVGNENAVN-QVFNCASDRYISYSGLFQAVGKVAEPSVNKMAFYYDPEDYDLKKGWFPFRNNHFFVNSEKAKRLLGWAPKHTITDDLAEYFEGYKAAGKDKAEPDFSTDDAI 1114
ALI QNKGGGHGE+G+HLA QL KG+ VTLLQD A K EK PF +YG++E+ G I+ + + L G+SF ++FDNYAKD +T +A AK+ W VKNYAYVSS GMY+ S P E+ K +GQR VE+ LA LPWTSFRPQYIYGP TNKRDYLDWFF R+ PLP G+Q+ ++T EDVA+MLASVVG E+A QVFNC +D +SY + + +G+V S + Y+P+ ++L KG FPFRN F V EKAK++LGW+ KH++++DL YFE YKAAG + +F D+ I
Sbjct: 4 ALIVQNKGGGHGEIGFHLARQLRSKGLDVTLLQDSAAK-MEKLPFKNYGEIEAEGVEIISCNLEDPSRILSSLSGKSFTHVFDNYAKD-KTVSTVAGLAKNTWRVKNYAYVSSAGMYESSVPQPMVETGATKATGQRAVEEFLASQELPWTSFRPQYIYGPYTNKRDYLDWFFHRITRD-RPCPLPGDGNQMASVTRVEDVAAMLASVVGKEDAAKGQVFNCGTDNMVSYRQICEMIGQVVGKSPKIVT--YNPKSFELPKGAFPFRNTEFCVTPEKAKKVLGWSRKHSLSEDLPWYFESYKAAGLEGKAMEFEADEII 317
BLAST of mRNA_H-paniculata_contig1789.4293.1 vs. uniprot
Match: A0A6V1PCS3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PCS3_HETAK) HSP 1 Score: 313 bits (803), Expect = 4.890e-99 Identity = 172/334 (51.50%), Postives = 219/334 (65.57%), Query Frame = 2
Query: 119 RRASQRDTVVASAGGKALIAQNKGGGHGELGYHLALQLIE-KGI-SVTLLQDGAGKNKEKQPFASYGDLESRGANIVWGDFS-EGVGKLVPEGESFDYIFDNYAKDVETCDDLAQKAKSWGVKNYAYVSSGGMYKDSDEVPFTESSDVKESGQRKVEQHLAGIGLPWTSFRPQYIYGPLTNKRDYLDWFFDRVVHGIELIPLPLHGDQLVTLTHAEDVASMLASVVGNENAVNQVFNCASDRYISYSGLFQAVGKVAEPSVNKMAFYYDPEDY-DLKKGWFPFRNNHFFVNSEKAKRLLGWAPKHTITDDL-AEYFEGYKAAGKDKAEPDFSTD 1105
RRA+ R + G ALI QNKGGGHGE+G+HLA L E KG +VT+LQDG G+ K PF+ YG+LE+ G +VW D EGV +L G+ FDY+FDN++KD T +A AK+ V+ +AYVSSGGMYK +P TE +D KE+GQR+VE++L GLPWT+FRPQYIYGP TNKRDYLD+F DR+ + +P+P G+QL ++THA DVA+MLA+ N A QVFNC +D Y++Y+ + + +GK + +YDP DLK FPFR HFFV KA R LGWAPKH + DDL A Y YKA GKD DF D
Sbjct: 30 RRAASRSALQML--GSALIVQNKGGGHGEIGFHLAKILKEEKGCDAVTILQDG-GEPSGKLPFSRYGELEALGCEVVWCDVKGEGVARLA--GKKFDYVFDNWSKDEATVKPIADMAKAQNVETFAYVSSGGMYKYPPTLPITEDADAKETGQREVEKYLDAAGLPWTAFRPQYIYGPATNKRDYLDYFVDRISRD-QPVPIPHSGEQLASVTHAYDVAAMLAAATANPKAAKQVFNCGTDAYLTYNEIARQIGKALGKEARLV--HYDPAQCPDLK---FPFRPQHFFVGVGKAMRELGWAPKHNLIDDLSAFYLADYKALGKDAQAMDFPAD 352 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1789.4293.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1789.4293.1 >prot_H-paniculata_contig1789.4293.1 ID=prot_H-paniculata_contig1789.4293.1|Name=mRNA_H-paniculata_contig1789.4293.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=513bp MRAVTPCLCVLAGAEVARSFIVPSFLPVVHISRTTTRRASQRDTVVASAGback to top mRNA from alignment at H-paniculata_contig1789:9199..14475- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1789.4293.1 ID=mRNA_H-paniculata_contig1789.4293.1|Name=mRNA_H-paniculata_contig1789.4293.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5277bp|location=Sequence derived from alignment at H-paniculata_contig1789:9199..14475- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1789:9199..14475- >mRNA_H-paniculata_contig1789.4293.1 ID=mRNA_H-paniculata_contig1789.4293.1|Name=mRNA_H-paniculata_contig1789.4293.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3078bp|location=Sequence derived from alignment at H-paniculata_contig1789:9199..14475- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |